Cow genome map
| Conread name: | rpfco0129_n4.y1 |
| Conread position: | 3-370 |
| Cow position: | chr13:24285937-24285569 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 3-485 |
| Cow position: | chr13:62169159-62169653 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 3-503 |
| Cow position: | chr13:18351225-18350711 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 33 |
| Conread position: | 5-254 |
| Cow position: | chr13:8960954-8960720 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 183, 23 |
| Conread position: | 6-316 |
| Cow position: | chr13:11290436-11290754 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 6-485 |
| Cow position: | chr13:661254-661747 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 6-487 |
| Cow position: | chr13:26382849-26383344 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 342 |
| Conread position: | 6-491 |
| Cow position: | chr13:6945755-6945264 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 6-500 |
| Cow position: | chr13:51941110-51940612 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 63 |
| Conread position: | 6-503 |
| Cow position: | chr13:9803438-9802943 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 63 |
| Conread position: | 6-503 |
| Cow position: | chr13:38897875-38898364 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 63 |
| Conread position: | 7-503 |
| Cow position: | chr13:14716955-14717464 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 7-503 |
| Cow position: | chr13:46284217-46284733 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 8-491 |
| Cow position: | chr13:23586537-23585994 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 370 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 8-503 |
| Cow position: | chr13:3015794-3016298 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 19 |
| Conread position: | 8-503 |
| Cow position: | chr13:12233079-12233578 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 61 |
| Conread position: | 12-360 |
| Cow position: | chr13:46985391-46985036 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 13-491 |
| Cow position: | chr13:2414397-2413917 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 328 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 123, 8 |
| Conread position: | 13-495 |
| Cow position: | chr13:16344077-16343577 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 95, 56 |
| Conread position: | 13-503 |
| Cow position: | chr13:32166928-32167435 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 56 |
| Conread position: | 14-446 |
| Cow position: | chr13:34728467-34728910 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 55 |
| Conread position: | 14-491 |
| Cow position: | chr13:43762544-43762055 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 320 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 130, 55 |
| Conread position: | 14-491 |
| Cow position: | chr13:60974438-60973966 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 14-503 |
| Cow position: | chr13:7010842-7010348 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 55 |
| Conread position: | 14-503 |
| Cow position: | chr13:32773718-32773232 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 15-420 |
| Cow position: | chr13:1767141-1766728 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 54 |
| Conread position: | 21-500 |
| Cow position: | chr13:25434763-25435245 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 48 |
| Conread position: | 24-503 |
| Cow position: | chr13:32717510-32717988 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 10 |
| Conread position: | 27-486 |
| Cow position: | chr13:23269853-23270314 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 41 |
| Conread position: | 28-497 |
| Cow position: | chr13:1042597-1043086 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 41 |
| Conread position: | 38-503 |
| Cow position: | chr13:33282377-33281881 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 42-446 |
| Cow position: | chr13:21039259-21039666 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 52-479 |
| Cow position: | chr13:4208483-4208914 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 17 |
| Conread position: | 56-491 |
| Cow position: | chr13:17622615-17622176 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 70-503 |
| Cow position: | chr13:34761991-34761559 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 73-500 |
| Cow position: | chr13:17886808-17886396 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 73-503 |
| Cow position: | chr13:9125988-9125546 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 73-503 |
| Cow position: | chr13:55843799-55843361 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 302 |
| Conread position: | 88-358 |
| Cow position: | chr13:14227244-14226953 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 252 |
| Conread position: | 88-503 |
| Cow position: | chr13:16327940-16327545 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 136 |
| Conread position: | 88-503 |
| Cow position: | chr13:54080504-54080939 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 263 |
| Conread position: | 90-491 |
| Cow position: | chr13:25817811-25817414 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 96, 150 |
| Conread position: | 90-495 |
| Cow position: | chr13:25537939-25537506 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 98, 232 |
| Conread position: | 92-503 |
| Cow position: | chr13:54095100-54094685 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 76 |
| Conread position: | 96-503 |
| Cow position: | chr13:12521492-12521903 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 72 |
| Conread position: | 101-502 |
| Cow position: | chr13:6759503-6759913 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 98 |
| Conread position: | 105-503 |
| Cow position: | chr13:23266012-23265608 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 145 |
| Conread position: | 112-491 |
| Cow position: | chr13:19393559-19393179 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 112-502 |
| Cow position: | chr13:24539768-24539386 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 115-494 |
| Cow position: | chr13:27314407-27314019 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 131, 33 |
| Conread position: | 119-485 |
| Cow position: | chr13:38277868-38278256 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 143 |
| Conread position: | 134-503 |
| Cow position: | chr13:6621344-6621716 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 135-427 |
| Cow position: | chr13:24404816-24404540 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 135-486 |
| Cow position: | chr13:54969570-54969908 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 136-503 |
| Cow position: | chr13:32904984-32904654 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 139-481 |
| Cow position: | chr13:1846134-1845800 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 140-447 |
| Cow position: | chr13:60487208-60487528 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 48, 258 |
| Conread position: | 140-503 |
| Cow position: | chr13:49848165-49847798 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 141-426 |
| Cow position: | chr13:11096415-11096136 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 142-393 |
| Cow position: | chr13:7262639-7262376 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 142-425 |
| Cow position: | chr13:57745854-57746147 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 142-446 |
| Cow position: | chr13:33631366-33631062 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 150 |
| Conread position: | 142-479 |
| Cow position: | chr13:9665321-9664958 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 219 |
| Conread position: | 142-480 |
| Cow position: | chr13:29631098-29630755 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 46 |
| Conread position: | 142-495 |
| Cow position: | chr13:15945746-15945364 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 251 |
| Conread position: | 142-495 |
| Cow position: | chr13:34995080-34995446 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 142-500 |
| Cow position: | chr13:24280494-24280135 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 143-491 |
| Cow position: | chr13:13577792-13578147 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 144-479 |
| Cow position: | chr13:47863455-47863802 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 144-481 |
| Cow position: | chr13:8524377-8524721 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 146-495 |
| Cow position: | chr13:1959251-1958891 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 200 |
| Conread position: | 146-495 |
| Cow position: | chr13:10932794-10932434 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 182 |
| Conread position: | 146-503 |
| Cow position: | chr13:20180639-20180291 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 146-503 |
| Cow position: | chr13:22886750-22887114 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 238 |
| Conread position: | 147-501 |
| Cow position: | chr13:30510302-30509941 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 292 |
| Conread position: | 150-503 |
| Cow position: | chr13:46501542-46501197 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 188 |
| Conread position: | 152-503 |
| Cow position: | chr13:60650684-60651030 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 53 |
| Conread position: | 153-361 |
| Cow position: | chr13:50823321-50823532 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 154-427 |
| Cow position: | chr13:30026347-30026065 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 157-503 |
| Cow position: | chr13:11767810-11768169 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 221 |
| Conread position: | 160-491 |
| Cow position: | chr13:12207271-12206935 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 153 |
| Conread position: | 161-503 |
| Cow position: | chr13:35718907-35719262 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 166 |
| Conread position: | 168-424 |
| Cow position: | chr13:60329970-60329717 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 21, 199 |
| Conread position: | 168-447 |
| Cow position: | chr13:38691320-38691599 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 156 |
| Conread position: | 168-503 |
| Cow position: | chr13:14220689-14220372 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 169-442 |
| Cow position: | chr13:57475200-57475477 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 169-487 |
| Cow position: | chr13:4464226-4463905 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 169-503 |
| Cow position: | chr13:17347026-17346685 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 189 |
| Conread position: | 170-447 |
| Cow position: | chr13:29814759-29814471 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 172-503 |
| Cow position: | chr13:8245116-8245456 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 179-486 |
| Cow position: | chr13:9593715-9593397 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 185-503 |
| Cow position: | chr13:21627682-21628005 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 65 |
| Conread position: | 187-380 |
| Cow position: | chr13:2302638-2302841 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 187-426 |
| Cow position: | chr13:46112167-46111922 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 69, 73 |
| Conread position: | 203-375 |
| Cow position: | chr13:24822583-24822758 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 208-499 |
| Cow position: | chr13:46430122-46430425 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 213-404 |
| Cow position: | chr13:39699977-39699783 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 219-502 |
| Cow position: | chr13:56673795-56674095 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 25, 185 |
| Conread position: | 219-503 |
| Cow position: | chr13:3796313-3796018 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 230-489 |
| Cow position: | chr13:58484912-58484664 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 235-503 |
| Cow position: | chr13:37558431-37558159 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 236-503 |
| Cow position: | chr13:50739317-50739044 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 242-503 |
| Cow position: | chr13:33975562-33975306 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 245-430 |
| Cow position: | chr13:34191303-34191489 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 255-494 |
| Cow position: | chr13:12745799-12745557 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 266-503 |
| Cow position: | chr13:35564405-35564187 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 269-503 |
| Cow position: | chr13:22075786-22075546 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 108 |
| Conread position: | 274-503 |
| Cow position: | chr13:43166924-43167156 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 279-476 |
| Cow position: | chr13:54695812-54696011 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 283-491 |
| Cow position: | chr13:48545246-48545442 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 288-501 |
| Cow position: | chr13:9082913-9083132 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 291-503 |
| Cow position: | chr13:18551087-18550880 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-503 |
| Cow position: | chr13:21888101-21888316 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 299-480 |
| Cow position: | chr13:54471095-54470911 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 301-503 |
| Cow position: | chr13:49200718-49200511 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 303-503 |
| Cow position: | chr13:33954950-33955150 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 309-495 |
| Cow position: | chr13:6894104-6893921 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 322-503 |
| Cow position: | chr13:15090853-15091034 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 327-503 |
| Cow position: | chr13:17796423-17796243 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 329-501 |
| Cow position: | chr13:52966924-52966755 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 330-498 |
| Cow position: | chr13:3212260-3212426 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 337-495 |
| Cow position: | chr13:52748753-52748911 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 337-503 |
| Cow position: | chr13:30271367-30271198 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 337-503 |
| Cow position: | chr13:58348124-58347960 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 341-503 |
| Cow position: | chr13:18761693-18761853 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 342-503 |
| Cow position: | chr13:33347165-33347011 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 360-503 |
| Cow position: | chr13:57958286-57958429 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 361-503 |
| Cow position: | chr13:46353501-46353638 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 364-503 |
| Cow position: | chr13:58620927-58621069 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 366-503 |
| Cow position: | chr13:54814897-54815036 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 372-503 |
| Cow position: | chr13:14099105-14099236 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-502 |
| Cow position: | chr13:16952476-16952347 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-503 |
| Cow position: | chr13:26508482-26508359 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 384-503 |
| Cow position: | chr13:20156480-20156362 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 384-503 |
| Cow position: | chr13:54643755-54643637 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 390-503 |
| Cow position: | chr13:55592048-55592161 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 390-503 |
| Cow position: | chr13:55618129-55618242 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-501 |
| Cow position: | chr13:17991644-17991536 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-503 |
| Cow position: | chr13:11463367-11463474 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 394-503 |
| Cow position: | chr13:22082374-22082265 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-501 |
| Cow position: | chr13:40417972-40418076 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-502 |
| Cow position: | chr13:11413353-11413461 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 408-502 |
| Cow position: | chr13:37435288-37435197 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.