Cow genome map

Conread name: rpfco0129_n4.y1

Conread position: 3-370
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 3-485
Cow position:
Alignm length: 504
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 67

Conread position: 3-503
Cow position:
Alignm length: 521
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 5-254
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 183, 23

Conread position: 6-316
Cow position:
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 26

Conread position: 6-485
Cow position:
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 6-487
Cow position:
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 342

Conread position: 6-491
Cow position:
Alignm length: 501
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 6-500
Cow position:
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 63

Conread position: 6-503
Cow position:
Alignm length: 507
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 63

Conread position: 6-503
Cow position:
Alignm length: 506
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 63

Conread position: 7-503
Cow position:
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 64

Conread position: 7-503
Cow position:
Alignm length: 530
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 62

Conread position: 8-491
Cow position:
Alignm length: 546
Alignm identity: 370
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 61

Conread position: 8-503
Cow position:
Alignm length: 512
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 19

Conread position: 8-503
Cow position:
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 61

Conread position: 12-360
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 26

Conread position: 13-491
Cow position:
Alignm length: 494
Alignm identity: 328
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 123, 8

Conread position: 13-495
Cow position:
Alignm length: 512
Alignm identity: 337
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 56

Conread position: 13-503
Cow position:
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 56

Conread position: 14-446
Cow position:
Alignm length: 451
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 55

Conread position: 14-491
Cow position:
Alignm length: 496
Alignm identity: 320
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 130, 55

Conread position: 14-491
Cow position:
Alignm length: 496
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 55

Conread position: 14-503
Cow position:
Alignm length: 504
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 55

Conread position: 14-503
Cow position:
Alignm length: 518
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 15-420
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 54

Conread position: 21-500
Cow position:
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 48

Conread position: 24-503
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 10

Conread position: 27-486
Cow position:
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 41

Conread position: 28-497
Cow position:
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 41

Conread position: 38-503
Cow position:
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 31

Conread position: 42-446
Cow position:
Alignm length: 418
Alignm identity: 279
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 86, 11

Conread position: 52-479
Cow position:
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 17

Conread position: 56-491
Cow position:
Alignm length: 452
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 14

Conread position: 70-503
Cow position:
Alignm length: 445
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 52

Conread position: 73-500
Cow position:
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 46

Conread position: 73-503
Cow position:
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 73-503
Cow position:
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 302

Conread position: 88-358
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 252

Conread position: 88-503
Cow position:
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 136

Conread position: 88-503
Cow position:
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 263

Conread position: 90-491
Cow position:
Alignm length: 410
Alignm identity: 271
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 96, 150

Conread position: 90-495
Cow position:
Alignm length: 436
Alignm identity: 295
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 98, 232

Conread position: 92-503
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 76

Conread position: 96-503
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 72

Conread position: 101-502
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 98

Conread position: 105-503
Cow position:
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 145

Conread position: 112-491
Cow position:
Alignm length: 391
Alignm identity: 259
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 10

Conread position: 112-502
Cow position:
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 23

Conread position: 115-494
Cow position:
Alignm length: 393
Alignm identity: 254
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 131, 33

Conread position: 119-485
Cow position:
Alignm length: 394
Alignm identity: 265
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 143

Conread position: 134-503
Cow position:
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 96

Conread position: 135-427
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 125, 51

Conread position: 135-486
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 40

Conread position: 136-503
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 32

Conread position: 139-481
Cow position:
Alignm length: 347
Alignm identity: 220
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 18

Conread position: 140-447
Cow position:
Alignm length: 325
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 258

Conread position: 140-503
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 141-426
Cow position:
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 22

Conread position: 142-393
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 142-425
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 26

Conread position: 142-446
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 150

Conread position: 142-479
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 219

Conread position: 142-480
Cow position:
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 46

Conread position: 142-495
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 251

Conread position: 142-495
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 142-500
Cow position:
Alignm length: 372
Alignm identity: 252
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 158

Conread position: 143-491
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 41

Conread position: 144-479
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 44, 122

Conread position: 144-481
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 87

Conread position: 146-495
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 200

Conread position: 146-495
Cow position:
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 182

Conread position: 146-503
Cow position:
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 146-503
Cow position:
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 238

Conread position: 147-501
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 292

Conread position: 150-503
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 188

Conread position: 152-503
Cow position:
Alignm length: 362
Alignm identity: 240
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 53

Conread position: 153-361
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 39

Conread position: 154-427
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 107

Conread position: 157-503
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 221

Conread position: 160-491
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 153

Conread position: 161-503
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 166

Conread position: 168-424
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 199

Conread position: 168-447
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 156

Conread position: 168-503
Cow position:
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 169-442
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 17

Conread position: 169-487
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 58

Conread position: 169-503
Cow position:
Alignm length: 347
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 189

Conread position: 170-447
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 45

Conread position: 172-503
Cow position:
Alignm length: 346
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 136

Conread position: 179-486
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 133

Conread position: 185-503
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 65

Conread position: 187-380
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 57, 21

Conread position: 187-426
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 73

Conread position: 203-375
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 44

Conread position: 208-499
Cow position:
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 213-404
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 18

Conread position: 219-502
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 185

Conread position: 219-503
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 160

Conread position: 230-489
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 63

Conread position: 235-503
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 54

Conread position: 236-503
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 141

Conread position: 242-503
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 125

Conread position: 245-430
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 15

Conread position: 255-494
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 5

Conread position: 266-503
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 10

Conread position: 269-503
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 108

Conread position: 274-503
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 100

Conread position: 279-476
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 54, 119

Conread position: 283-491
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 288-501
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 60

Conread position: 291-503
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 295-503
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 13

Conread position: 299-480
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 93

Conread position: 301-503
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 303-503
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 72

Conread position: 309-495
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 322-503
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 101, 14

Conread position: 327-503
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 46

Conread position: 329-501
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 62, 126

Conread position: 330-498
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 337-495
Cow position:
Alignm length: 159
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 337-503
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 337-503
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 341-503
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 342-503
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 360-503
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 79

Conread position: 361-503
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 364-503
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 117

Conread position: 366-503
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 372-503
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 373-502
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 382-503
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 102
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 390-503
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 390-503
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 393-501
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 393-503
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 394-503
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 397-501
Cow position:
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 397-502
Cow position:
Alignm length: 109
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 408-502
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.