Cow genome map

Conread name: rpfco0129_n4.y1

Conread position: 1-411
Cow position:
Alignm length: 436
Alignm identity: 292
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 69

Conread position: 3-480
Cow position:
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 3-496
Cow position:
Alignm length: 504
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 68

Conread position: 3-501
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 67

Conread position: 3-503
Cow position:
Alignm length: 514
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 3-503
Cow position:
Alignm length: 515
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 61

Conread position: 4-288
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 5, 66

Conread position: 5-503
Cow position:
Alignm length: 505
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 64

Conread position: 6-370
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 6-426
Cow position:
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 6-427
Cow position:
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 47

Conread position: 6-502
Cow position:
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 65

Conread position: 6-503
Cow position:
Alignm length: 518
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 63

Conread position: 8-359
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 69

Conread position: 8-491
Cow position:
Alignm length: 505
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 43

Conread position: 9-441
Cow position:
Alignm length: 469
Alignm identity: 311
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 60

Conread position: 9-447
Cow position:
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 17

Conread position: 10-426
Cow position:
Alignm length: 425
Alignm identity: 285
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 164, 59

Conread position: 11-503
Cow position:
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 58

Conread position: 14-480
Cow position:
Alignm length: 485
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 56

Conread position: 14-480
Cow position:
Alignm length: 474
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 12

Conread position: 14-481
Cow position:
Alignm length: 489
Alignm identity: 329
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 59

Conread position: 14-500
Cow position:
Alignm length: 496
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 54

Conread position: 19-503
Cow position:
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 50

Conread position: 20-260
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 150, 22

Conread position: 21-503
Cow position:
Alignm length: 490
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 48

Conread position: 23-479
Cow position:
Alignm length: 464
Alignm identity: 303
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 48

Conread position: 26-503
Cow position:
Alignm length: 491
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 63

Conread position: 38-486
Cow position:
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 31

Conread position: 55-503
Cow position:
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 18

Conread position: 56-488
Cow position:
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 13

Conread position: 58-424
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 12

Conread position: 73-407
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 75, 208

Conread position: 76-491
Cow position:
Alignm length: 419
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 165

Conread position: 76-503
Cow position:
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 229

Conread position: 77-495
Cow position:
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 79-501
Cow position:
Alignm length: 456
Alignm identity: 311
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 165

Conread position: 79-503
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 41

Conread position: 88-432
Cow position:
Alignm length: 357
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 55

Conread position: 90-281
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 72

Conread position: 92-491
Cow position:
Alignm length: 408
Alignm identity: 275
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 96, 36

Conread position: 97-411
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 193

Conread position: 108-503
Cow position:
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 110-491
Cow position:
Alignm length: 387
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 158, 83

Conread position: 122-419
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 7

Conread position: 122-436
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 146, 7

Conread position: 128-437
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 8, 39

Conread position: 129-427
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 165

Conread position: 134-491
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 28

Conread position: 134-503
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 244

Conread position: 135-424
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 183

Conread position: 135-491
Cow position:
Alignm length: 375
Alignm identity: 253
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 33

Conread position: 135-500
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 22

Conread position: 135-503
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 240

Conread position: 136-313
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 52, 88

Conread position: 136-491
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 166

Conread position: 136-503
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 209

Conread position: 137-359
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 30

Conread position: 140-436
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 48, 28

Conread position: 142-317
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 77

Conread position: 142-376
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 13

Conread position: 142-411
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 155

Conread position: 142-426
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 26

Conread position: 142-482
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 37

Conread position: 142-503
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 144-413
Cow position:
Alignm length: 274
Alignm identity: 202
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 24

Conread position: 145-407
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 101, 36

Conread position: 145-501
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 32

Conread position: 146-441
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 226

Conread position: 148-502
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 39, 116

Conread position: 152-412
Cow position:
Alignm length: 265
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 74

Conread position: 156-491
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 159

Conread position: 168-471
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 215

Conread position: 168-491
Cow position:
Alignm length: 334
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 20, 200

Conread position: 168-503
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 189

Conread position: 169-494
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 127

Conread position: 169-503
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 19, 27

Conread position: 186-503
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 58, 31

Conread position: 204-470
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 40, 89

Conread position: 217-503
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 106

Conread position: 230-495
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 113

Conread position: 230-503
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 63

Conread position: 231-503
Cow position:
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 140

Conread position: 235-500
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 55

Conread position: 240-495
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 142

Conread position: 249-503
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 60

Conread position: 250-503
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 20, 205

Conread position: 259-480
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 29

Conread position: 259-494
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 81

Conread position: 259-503
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 129

Conread position: 260-503
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 8, 42

Conread position: 269-485
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 39

Conread position: 269-501
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 10

Conread position: 269-502
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 52

Conread position: 269-503
Cow position:
Alignm length: 240
Alignm identity: 162
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 84

Conread position: 270-503
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 0

Conread position: 271-485
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 65

Conread position: 278-502
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 90, 58

Conread position: 286-503
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 52

Conread position: 286-503
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 99

Conread position: 288-503
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 290-495
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 31

Conread position: 291-503
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 101

Conread position: 298-503
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 308-495
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 66

Conread position: 337-473
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 13

Conread position: 337-502
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 337-503
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 337-503
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 337-503
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 138

Conread position: 339-491
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 351-503
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 77, 45

Conread position: 366-491
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 369-503
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 373-503
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 383-503
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 383-503
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 405-503
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.