Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               3-503
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 54
               

               Conread position:
               4-495
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               4-503
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               6-372
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               120, 63
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 63
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 63
               

               Conread position:
               6-502
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 63
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 12
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 63
               

               Conread position:
               7-427
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               181, 25
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 61
               

               Conread position:
               8-500
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 24
               

               Conread position:
               8-503
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               10-483
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 59
               

               Conread position:
               11-367
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               177, 10
               

               Conread position:
               12-491
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               13-423
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               161, 52
               

               Conread position:
               13-503
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 56
               

               Conread position:
               14-478
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               326
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               14-485
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               325
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               174, 54
               

               Conread position:
               14-503
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 6
               

               Conread position:
               24-483
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               164, 22
               

               Conread position:
               26-491
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               323
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               27-425
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               27-501
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               311
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               45, 67
               

               Conread position:
               56-359
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               66-283
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-450
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               24, 111
               

               Conread position:
               66-495
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               75-336
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               79-503
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               95-500
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 125
               

               Conread position:
               96-485
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               92, 222
               

               Conread position:
               110-485
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               129-397
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               129-428
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               132-425
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               132, 37
               

               Conread position:
               135-490
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 243
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               52, 162
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 371
               

               Conread position:
               136-468
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 251
               

               Conread position:
               136-495
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               136-503
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               140-503
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               141-315
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               142-426
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 112
               

               Conread position:
               142-486
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 166
               

               Conread position:
               143-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               45, 193
               

               Conread position:
               144-427
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               144-491
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               145-293
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               145-491
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 232
               

               Conread position:
               146-495
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               150-503
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 155
               

               Conread position:
               151-491
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 73
               

               Conread position:
               151-501
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               116, 26
               

               Conread position:
               153-433
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 170
               

               Conread position:
               155-503
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               156-484
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               168-426
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               174-502
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 215
               

               Conread position:
               176-503
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               181-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               80, 117
               

               Conread position:
               195-503
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               200-503
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               201-500
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               202-437
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               204-495
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               207-470
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 174
               

               Conread position:
               207-503
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               212-503
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               113, 5
               

               Conread position:
               219-495
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 128
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               238-402
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               242-503
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               259-469
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               259-503
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 200
               

               Conread position:
               269-491
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               191, 78
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               271-503
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               280-503
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               282-495
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               282-503
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               202, 58
               

               Conread position:
               301-463
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               316-488
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               318-501
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               322-502
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               329-503
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               85, 155
               

               Conread position:
               337-502
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               349-495
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               363-503
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               370-503
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               371-503
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               383-503
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               404-501
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               420-503
               

               Cow position:
               
               

               Alignm length:
               84
               

               Alignm identity:
               75
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.