Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 69
               

               Conread position:
               5-491
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 28
               

               Conread position:
               5-491
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               6-413
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 63
               

               Conread position:
               6-426
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 67
               

               Conread position:
               6-438
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 63
               

               Conread position:
               6-492
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 63
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               8-344
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               8-485
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               8-490
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 65
               

               Conread position:
               8-499
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 61
               

               Conread position:
               9-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 61
               

               Conread position:
               13-293
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               173, 8
               

               Conread position:
               13-501
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 56
               

               Conread position:
               14-485
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               21-446
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               167, 48
               

               Conread position:
               21-491
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               319
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               22-426
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               287
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               27-374
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 46
               

               Conread position:
               32-301
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               156, 28
               

               Conread position:
               45-319
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 24
               

               Conread position:
               67-423
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               75-476
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               112, 140
               

               Conread position:
               89-446
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               90-427
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               96-495
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               97-426
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               33, 216
               

               Conread position:
               110-503
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               112-503
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               121-490
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               53, 216
               

               Conread position:
               130-503
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               135-426
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               125, 28
               

               Conread position:
               135-446
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 258
               

               Conread position:
               135-482
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               135-486
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 202
               

               Conread position:
               136-426
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 215
               

               Conread position:
               136-495
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               140-426
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               140-494
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               142-329
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               142-425
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               142-450
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 153
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               253
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               143-495
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 149
               

               Conread position:
               146-359
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 165
               

               Conread position:
               146-426
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 190
               

               Conread position:
               147-477
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               41, 200
               

               Conread position:
               147-503
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 222
               

               Conread position:
               148-494
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               149-427
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               150-503
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               157-503
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               160-494
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               168-490
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               18, 205
               

               Conread position:
               168-491
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               18, 145
               

               Conread position:
               168-500
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               170-503
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               16, 199
               

               Conread position:
               176-461
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 170
               

               Conread position:
               177-503
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               203-408
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 176
               

               Conread position:
               206-477
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               213-495
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               216-503
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               220-503
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               236-503
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               24, 20
               

               Conread position:
               241-503
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               250-427
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               258-503
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               269-495
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               273-448
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               274-503
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               275-491
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               279-503
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               286-503
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 89
               

               Conread position:
               298-501
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               322-494
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               338-502
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               338-503
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               362-501
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               364-495
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               373-503
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               381-503
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               384-503
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               398-503
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               400-498
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               402-502
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.