Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               3-496
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 66
               

               Conread position:
               4-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               5-413
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               5-503
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 110
               

               Conread position:
               5-503
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 230
               

               Conread position:
               6-460
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 63
               

               Conread position:
               8-421
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 61
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               9-503
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               11-442
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               161, 10
               

               Conread position:
               13-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               157, 8
               

               Conread position:
               13-484
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 56
               

               Conread position:
               13-491
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 56
               

               Conread position:
               14-412
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               14-426
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 55
               

               Conread position:
               14-446
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               14-480
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               14-486
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               14-503
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 55
               

               Conread position:
               20-494
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               27-360
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               161, 7
               

               Conread position:
               28-495
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               193, 41
               

               Conread position:
               28-503
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 15
               

               Conread position:
               29-371
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               33-363
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               41-501
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 28
               

               Conread position:
               45-426
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               53-306
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               56-478
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               57-485
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               131, 12
               

               Conread position:
               57-489
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 12
               

               Conread position:
               58-411
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               59-489
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               66-439
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               66-491
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               75-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               76-503
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               313
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               71, 140
               

               Conread position:
               88-503
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 52
               

               Conread position:
               89-495
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               101-409
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               108-503
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               110-500
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               112-503
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               75, 16
               

               Conread position:
               124-412
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               129-427
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               130-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 240
               

               Conread position:
               134-491
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 183
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               135-311
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               135-444
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 183
               

               Conread position:
               135-451
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               135-494
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               136-387
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               136-479
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 29
               

               Conread position:
               140-490
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               144-503
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               145-402
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               145-480
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               145-491
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               145-503
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 153
               

               Conread position:
               147-495
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               147-501
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 241
               

               Conread position:
               148-500
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 221
               

               Conread position:
               157-486
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               168-417
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               168-489
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               20, 127
               

               Conread position:
               168-491
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               169-503
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               162, 66
               

               Conread position:
               170-500
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               171-485
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               184-494
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               187-491
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               81, 42
               

               Conread position:
               193-501
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               59, 138
               

               Conread position:
               200-426
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               200-491
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 169
               

               Conread position:
               206-503
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 207
               

               Conread position:
               217-499
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               220-503
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               221-449
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 109
               

               Conread position:
               233-502
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               235-500
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               236-501
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               260-500
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               260-503
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               270-503
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               271-491
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               278-503
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               281-486
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               286-502
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               334-503
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               336-491
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               338-491
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               341-503
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               366-503
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               373-503
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               380-503
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               397-503
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.