Cow genome map

Conread name: rpfco0129_n4.y1

Conread position: 2-316
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 56

Conread position: 3-322
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 67

Conread position: 3-480
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 3-495
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 66

Conread position: 3-495
Cow position:
Alignm length: 524
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 66

Conread position: 3-501
Cow position:
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 3-502
Cow position:
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 49

Conread position: 3-503
Cow position:
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 67

Conread position: 3-503
Cow position:
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 5-447
Cow position:
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 55

Conread position: 5-491
Cow position:
Alignm length: 498
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 65

Conread position: 6-361
Cow position:
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 30

Conread position: 6-371
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 64

Conread position: 6-405
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 63

Conread position: 6-447
Cow position:
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 27

Conread position: 6-502
Cow position:
Alignm length: 513
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 63

Conread position: 6-503
Cow position:
Alignm length: 508
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 6-503
Cow position:
Alignm length: 522
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 63

Conread position: 6-503
Cow position:
Alignm length: 514
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 7-446
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 62

Conread position: 7-503
Cow position:
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 62

Conread position: 8-500
Cow position:
Alignm length: 506
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 61

Conread position: 9-397
Cow position:
Alignm length: 402
Alignm identity: 270
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 235, 66

Conread position: 9-481
Cow position:
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 12

Conread position: 9-490
Cow position:
Alignm length: 509
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 12

Conread position: 10-502
Cow position:
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 59

Conread position: 13-426
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 8

Conread position: 13-491
Cow position:
Alignm length: 495
Alignm identity: 325
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 107, 55

Conread position: 14-301
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 174, 50

Conread position: 14-303
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 54

Conread position: 14-360
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 242, 54

Conread position: 14-370
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 55

Conread position: 14-426
Cow position:
Alignm length: 416
Alignm identity: 277
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 172, 55

Conread position: 14-434
Cow position:
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 54

Conread position: 14-474
Cow position:
Alignm length: 475
Alignm identity: 285
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 134, 55

Conread position: 14-485
Cow position:
Alignm length: 484
Alignm identity: 319
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 62, 55

Conread position: 14-486
Cow position:
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 54

Conread position: 14-491
Cow position:
Alignm length: 499
Alignm identity: 326
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 112, 54

Conread position: 14-491
Cow position:
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 51

Conread position: 14-503
Cow position:
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 55

Conread position: 14-503
Cow position:
Alignm length: 521
Alignm identity: 347
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 88, 55

Conread position: 29-503
Cow position:
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 40

Conread position: 38-260
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 151, 31

Conread position: 38-497
Cow position:
Alignm length: 489
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 32

Conread position: 39-502
Cow position:
Alignm length: 489
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 30

Conread position: 43-500
Cow position:
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 26

Conread position: 55-433
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 14

Conread position: 57-299
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 12

Conread position: 75-447
Cow position:
Alignm length: 386
Alignm identity: 258
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 10

Conread position: 88-500
Cow position:
Alignm length: 442
Alignm identity: 303
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 114

Conread position: 95-503
Cow position:
Alignm length: 419
Alignm identity: 283
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 34

Conread position: 108-490
Cow position:
Alignm length: 396
Alignm identity: 257
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 31

Conread position: 110-503
Cow position:
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 66

Conread position: 116-500
Cow position:
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 178

Conread position: 117-500
Cow position:
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 122-491
Cow position:
Alignm length: 376
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 79

Conread position: 130-492
Cow position:
Alignm length: 375
Alignm identity: 246
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 5, 154

Conread position: 132-389
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 10

Conread position: 133-501
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 211

Conread position: 135-427
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 33

Conread position: 136-488
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 33

Conread position: 136-502
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 257

Conread position: 137-490
Cow position:
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 140-334
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 95

Conread position: 142-490
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 26

Conread position: 142-492
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 142-500
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 26

Conread position: 142-501
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 146

Conread position: 142-503
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 26

Conread position: 142-503
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 120, 35

Conread position: 143-495
Cow position:
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 172

Conread position: 144-482
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 61

Conread position: 145-423
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 43, 237

Conread position: 145-503
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 198

Conread position: 145-503
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 23

Conread position: 146-413
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 167

Conread position: 146-503
Cow position:
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 149

Conread position: 147-446
Cow position:
Alignm length: 312
Alignm identity: 203
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 200

Conread position: 148-463
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 116, 49

Conread position: 148-486
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 157

Conread position: 150-491
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 47

Conread position: 152-503
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 141

Conread position: 160-503
Cow position:
Alignm length: 358
Alignm identity: 244
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 63

Conread position: 168-317
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 143

Conread position: 168-384
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 51

Conread position: 168-406
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 142

Conread position: 168-479
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 76, 170

Conread position: 168-503
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 130

Conread position: 171-503
Cow position:
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 211

Conread position: 173-501
Cow position:
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 200

Conread position: 178-495
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 59

Conread position: 186-459
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 67

Conread position: 186-480
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 76, 183

Conread position: 191-437
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 195-503
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 146

Conread position: 201-503
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 213-503
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 77

Conread position: 217-476
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 19

Conread position: 217-503
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 42, 7

Conread position: 218-490
Cow position:
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 94

Conread position: 221-488
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 41, 106

Conread position: 226-503
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 13

Conread position: 235-503
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 184

Conread position: 239-487
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 109

Conread position: 240-503
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 244-495
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 137

Conread position: 269-468
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 107

Conread position: 270-487
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 211, 15

Conread position: 278-489
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 192

Conread position: 278-503
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 64

Conread position: 280-481
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 95

Conread position: 287-503
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 38

Conread position: 290-503
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 291-503
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 50

Conread position: 298-498
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 100

Conread position: 304-501
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 322-485
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 101, 14

Conread position: 330-503
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 11

Conread position: 330-503
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 342-495
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 363-503
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 365-503
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 369-502
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 391-503
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 396-503
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.