Cow genome map
Conread name: | rpfco0129_n4.y1 |
Conread position: | 3-361 |
Cow position: | chr23:3745215-3745577 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 255 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 7, 61 |
Conread position: | 3-495 |
Cow position: | chr23:29271706-29272219 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 67 |
Conread position: | 4-487 |
Cow position: | chr23:36146841-36146374 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 65 |
Conread position: | 4-503 |
Cow position: | chr23:11434664-11434148 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 66 |
Conread position: | 5-486 |
Cow position: | chr23:25865074-25864600 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 64 |
Conread position: | 5-502 |
Cow position: | chr23:19636658-19636150 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 64 |
Conread position: | 6-380 |
Cow position: | chr23:11564744-11564359 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 276 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 120, 63 |
Conread position: | 6-380 |
Cow position: | chr23:23470553-23470923 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 68 |
Conread position: | 6-503 |
Cow position: | chr23:9641810-9641321 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 63 |
Conread position: | 6-503 |
Cow position: | chr23:9711995-9711483 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 31 |
Conread position: | 6-503 |
Cow position: | chr23:20586106-20585589 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 63 |
Conread position: | 6-503 |
Cow position: | chr23:26066707-26067205 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 340 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 109, 63 |
Conread position: | 8-427 |
Cow position: | chr23:644925-645360 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 303 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 24 |
Conread position: | 8-427 |
Cow position: | chr23:16610202-16609774 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 61 |
Conread position: | 8-477 |
Cow position: | chr23:792414-791945 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 326 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 69, 62 |
Conread position: | 8-490 |
Cow position: | chr23:40861968-40862445 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 35 |
Conread position: | 8-500 |
Cow position: | chr23:40526363-40525874 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 43 |
Conread position: | 9-291 |
Cow position: | chr23:28111542-28111825 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 192 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 130, 59 |
Conread position: | 9-426 |
Cow position: | chr23:1670531-1670933 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 289 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 179, 12 |
Conread position: | 10-501 |
Cow position: | chr23:14126174-14126674 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 30 |
Conread position: | 13-486 |
Cow position: | chr23:14164786-14164298 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 10 |
Conread position: | 14-485 |
Cow position: | chr23:11128847-11129329 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 56 |
Conread position: | 29-477 |
Cow position: | chr23:16058228-16058677 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 40 |
Conread position: | 31-491 |
Cow position: | chr23:38455553-38455077 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 25 |
Conread position: | 35-503 |
Cow position: | chr23:5389339-5389811 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 38 |
Conread position: | 38-501 |
Cow position: | chr23:31607534-31607044 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 31 |
Conread position: | 57-356 |
Cow position: | chr23:29471458-29471162 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 199 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 131, 42 |
Conread position: | 66-491 |
Cow position: | chr23:6223675-6224074 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 275 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 122, 36 |
Conread position: | 78-485 |
Cow position: | chr23:20781501-20781903 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 281 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 72, 51 |
Conread position: | 88-502 |
Cow position: | chr23:20752700-20753118 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 80 |
Conread position: | 93-503 |
Cow position: | chr23:22660874-22660477 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 33 |
Conread position: | 102-427 |
Cow position: | chr23:17876000-17875684 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 221 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 24, 62 |
Conread position: | 109-503 |
Cow position: | chr23:20171287-20171693 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 30 |
Conread position: | 111-486 |
Cow position: | chr23:4726512-4726888 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 268 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 145, 35 |
Conread position: | 115-491 |
Cow position: | chr23:35363057-35362678 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 34 |
Conread position: | 135-503 |
Cow position: | chr23:16237526-16237144 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 19 |
Conread position: | 136-503 |
Cow position: | chr23:37224333-37223961 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 214 |
Conread position: | 141-439 |
Cow position: | chr23:10424601-10424877 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 211 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 20, 86 |
Conread position: | 141-470 |
Cow position: | chr23:7550909-7550575 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 239 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 46, 116 |
Conread position: | 142-433 |
Cow position: | chr23:9652726-9652447 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 46, 66 |
Conread position: | 142-446 |
Cow position: | chr23:26795163-26794858 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 204 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 44, 127 |
Conread position: | 142-503 |
Cow position: | chr23:22588529-22588167 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 230 |
Conread position: | 142-503 |
Cow position: | chr23:28700743-28701099 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 255 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 46, 164 |
Conread position: | 143-446 |
Cow position: | chr23:20057125-20056812 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 215 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 43, 122 |
Conread position: | 144-503 |
Cow position: | chr23:1203976-1203615 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 250 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 44, 19 |
Conread position: | 144-503 |
Cow position: | chr23:17092745-17092385 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 152 |
Conread position: | 146-491 |
Cow position: | chr23:26632545-26632906 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 252 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 42, 22 |
Conread position: | 147-491 |
Cow position: | chr23:41590163-41589822 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 148-503 |
Cow position: | chr23:17000448-17000817 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 262 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 63, 25 |
Conread position: | 150-495 |
Cow position: | chr23:21866506-21866845 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 248 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 153-503 |
Cow position: | chr23:15872949-15872580 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 252 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 33, 227 |
Conread position: | 157-503 |
Cow position: | chr23:13359576-13359938 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 245 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 30, 11 |
Conread position: | 168-486 |
Cow position: | chr23:5603504-5603188 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 234 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 20, 66 |
Conread position: | 168-491 |
Cow position: | chr23:15742866-15743191 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 228 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 20, 58 |
Conread position: | 168-503 |
Cow position: | chr23:30210577-30210236 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 51 |
Conread position: | 170-494 |
Cow position: | chr23:40891130-40891466 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 95 |
Conread position: | 170-503 |
Cow position: | chr23:30307677-30308020 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 252 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 18, 30 |
Conread position: | 186-427 |
Cow position: | chr23:32662361-32662612 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 56, 110 |
Conread position: | 186-481 |
Cow position: | chr23:21659723-21660036 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 67, 230 |
Conread position: | 186-483 |
Cow position: | chr23:5723329-5723630 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 207 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 70, 128 |
Conread position: | 187-503 |
Cow position: | chr23:28895181-28894843 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 242 |
Conread position: | 202-495 |
Cow position: | chr23:35177120-35177423 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 208 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 35, 100 |
Conread position: | 203-448 |
Cow position: | chr23:24516056-24515832 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 184 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 207-503 |
Cow position: | chr23:30773872-30773587 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 30, 167 |
Conread position: | 216-446 |
Cow position: | chr23:27290966-27290726 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 175 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 25, 129 |
Conread position: | 216-494 |
Cow position: | chr23:26050865-26051142 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 196 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 105, 42 |
Conread position: | 217-503 |
Cow position: | chr23:40651645-40651360 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 209 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 83 |
Conread position: | 218-503 |
Cow position: | chr23:16793415-16793694 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 215 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 39, 95 |
Conread position: | 236-503 |
Cow position: | chr23:16072484-16072232 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 194 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 57 |
Conread position: | 244-467 |
Cow position: | chr23:6031725-6031952 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 12, 49 |
Conread position: | 269-502 |
Cow position: | chr23:29393324-29393543 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 174 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 219, 35 |
Conread position: | 271-503 |
Cow position: | chr23:1677277-1677507 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 163 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 16, 31 |
Conread position: | 281-503 |
Cow position: | chr23:23192258-23192043 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 286-495 |
Cow position: | chr23:14543328-14543120 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 145 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 291-502 |
Cow position: | chr23:18326702-18326915 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 44, 91 |
Conread position: | 324-486 |
Cow position: | chr23:22418931-22419078 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 324-495 |
Cow position: | chr23:26217497-26217664 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 331-503 |
Cow position: | chr23:35155312-35155486 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 83, 49 |
Conread position: | 332-488 |
Cow position: | chr23:17477305-17477159 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 337-488 |
Cow position: | chr23:35498081-35497930 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 337-495 |
Cow position: | chr23:14840569-14840408 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 40, 59 |
Conread position: | 337-502 |
Cow position: | chr23:21276078-21275906 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 81, 59 |
Conread position: | 340-503 |
Cow position: | chr23:7611216-7611374 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 128 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 342-503 |
Cow position: | chr23:36082530-36082697 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 63, 17 |
Conread position: | 349-503 |
Cow position: | chr23:1717597-1717437 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 357-503 |
Cow position: | chr23:18495764-18495908 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 362-503 |
Cow position: | chr23:13319912-13320049 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 364-501 |
Cow position: | chr23:29981180-29981315 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 376-484 |
Cow position: | chr23:23974900-23975003 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 92 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 376-503 |
Cow position: | chr23:11564392-11564267 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 20, 105 |
Show alignments to all cow chromosomes.