Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               2-503
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 67
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               340
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               342
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               3-503
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               5-503
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 64
               

               Conread position:
               6-444
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 64
               

               Conread position:
               6-480
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               340
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 63
               

               Conread position:
               6-502
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 63
               

               Conread position:
               7-380
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               8-491
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 61
               

               Conread position:
               8-501
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 43
               

               Conread position:
               8-502
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               8-503
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 61
               

               Conread position:
               9-503
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 18
               

               Conread position:
               13-376
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               14-426
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 27
               

               Conread position:
               14-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 29
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 7
               

               Conread position:
               14-495
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               14-500
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               172, 55
               

               Conread position:
               15-503
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               222, 54
               

               Conread position:
               16-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               46-491
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               297
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               52-394
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               75-486
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               76-442
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 241
               

               Conread position:
               77-491
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               182, 29
               

               Conread position:
               78-503
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               90-486
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               95-495
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               129-305
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               129-491
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               7, 220
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               136-503
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 93
               

               Conread position:
               137-402
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               137-427
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               139-284
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               140-427
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 178
               

               Conread position:
               140-427
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 175
               

               Conread position:
               140-503
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               140-503
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               142-464
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 149
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 122
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 95
               

               Conread position:
               143-503
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               144-491
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               144-503
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               150-446
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               150-503
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 199
               

               Conread position:
               153-491
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 138
               

               Conread position:
               154-427
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               156-418
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 143
               

               Conread position:
               168-495
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               169-503
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               174-503
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               179-503
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               183-489
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               234
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               88, 53
               

               Conread position:
               204-434
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               204-489
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               204-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 185
               

               Conread position:
               207-442
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 139
               

               Conread position:
               218-503
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               219-503
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 41
               

               Conread position:
               221-430
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               231-503
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               236-501
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               258-446
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 7
               

               Conread position:
               259-503
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 115
               

               Conread position:
               261-495
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               269-500
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               101, 65
               

               Conread position:
               278-479
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               283-503
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               296-500
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               313-496
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               334-494
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               336-503
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               7, 157
               

               Conread position:
               337-495
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               338-495
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               338-503
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               349-503
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               369-483
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               400-503
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               6, 0
               
Show alignments to all cow chromosomes.