Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               3-500
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 40
               

               Conread position:
               3-502
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               4-478
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               5-491
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 64
               

               Conread position:
               6-500
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 45
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 198
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 63
               

               Conread position:
               7-487
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 46
               

               Conread position:
               7-491
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               344
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               119, 62
               

               Conread position:
               8-503
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               9-374
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               254, 60
               

               Conread position:
               11-503
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               13-250
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               13-500
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 56
               

               Conread position:
               13-501
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 8
               

               Conread position:
               14-336
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               14-425
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               14-480
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               15-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               159, 45
               

               Conread position:
               16-359
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               17-450
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               171, 52
               

               Conread position:
               29-444
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 9
               

               Conread position:
               39-503
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 34
               

               Conread position:
               61-503
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 100
               

               Conread position:
               110-503
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               122-490
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               130-495
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 117
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               135-446
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               135-486
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               171, 11
               

               Conread position:
               136-404
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               138-441
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               140-420
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 112
               

               Conread position:
               141-503
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               142-445
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               142-480
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 104
               

               Conread position:
               142-495
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 235
               

               Conread position:
               156-503
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               157-475
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               168-424
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               171-501
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               175-496
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               190-486
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               191-503
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               216-439
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               217-481
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               224-503
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 167
               

               Conread position:
               231-502
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               231-503
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               236-503
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               253-503
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               264-489
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               269-480
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 86
               

               Conread position:
               275-503
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               276-503
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               284-503
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 113
               

               Conread position:
               289-503
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               293-496
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               296-500
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               296-503
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               330-502
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               330-503
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               332-503
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 31
               
Show alignments to all cow chromosomes.