Cow genome map
Conread name: | rpfco0129_n4.y1 |
Conread position: | 3-291 |
Cow position: | chr26:19537118-19537417 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 209 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 7, 46 |
Conread position: | 3-503 |
Cow position: | chr26:2389442-2388942 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 75 |
Conread position: | 5-486 |
Cow position: | chr26:34108390-34108869 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 64 |
Conread position: | 5-503 |
Cow position: | chr26:8651963-8651482 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 64 |
Conread position: | 5-503 |
Cow position: | chr26:21859440-21859951 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 70 |
Conread position: | 6-379 |
Cow position: | chr26:31794400-31794773 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 63 |
Conread position: | 6-406 |
Cow position: | chr26:2246565-2246983 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 12 |
Conread position: | 6-490 |
Cow position: | chr26:34031708-34032208 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 63 |
Conread position: | 6-503 |
Cow position: | chr26:783312-782803 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 63 |
Conread position: | 7-361 |
Cow position: | chr26:10813843-10814183 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 62 |
Conread position: | 7-386 |
Cow position: | chr26:6323287-6323664 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 62 |
Conread position: | 8-503 |
Cow position: | chr26:3755864-3756349 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 61 |
Conread position: | 11-487 |
Cow position: | chr26:9063969-9064452 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 37 |
Conread position: | 13-502 |
Cow position: | chr26:29353884-29353386 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 56 |
Conread position: | 14-486 |
Cow position: | chr26:8700421-8699936 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 55 |
Conread position: | 14-486 |
Cow position: | chr26:25393656-25394150 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 86 |
Conread position: | 52-500 |
Cow position: | chr26:16603959-16604410 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 17 |
Conread position: | 97-411 |
Cow position: | chr26:34847457-34847774 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 211 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 91, 29 |
Conread position: | 119-480 |
Cow position: | chr26:26466985-26466628 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 137, 49 |
Conread position: | 129-446 |
Cow position: | chr26:33745656-33745986 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 294 |
Conread position: | 130-503 |
Cow position: | chr26:9666666-9666288 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 112 |
Conread position: | 131-496 |
Cow position: | chr26:27083-26716 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 246 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 57, 126 |
Conread position: | 135-486 |
Cow position: | chr26:23097427-23097083 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 240 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 122, 13 |
Conread position: | 135-487 |
Cow position: | chr26:7103288-7102935 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 242 |
Conread position: | 136-485 |
Cow position: | chr26:2610048-2609697 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 251 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 52, 12 |
Conread position: | 136-503 |
Cow position: | chr26:2770086-2769715 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 32 |
Conread position: | 136-503 |
Cow position: | chr26:14080467-14080832 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 126 |
Conread position: | 142-494 |
Cow position: | chr26:14924255-14924599 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 65 |
Conread position: | 142-503 |
Cow position: | chr26:4748101-4747734 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 142-503 |
Cow position: | chr26:17288962-17289324 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 98 |
Conread position: | 144-503 |
Cow position: | chr26:2408950-2408604 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 70 |
Conread position: | 145-488 |
Cow position: | chr26:12668959-12669311 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 146-503 |
Cow position: | chr26:9632610-9632237 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 36 |
Conread position: | 151-491 |
Cow position: | chr26:17057448-17057794 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 237 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 37, 17 |
Conread position: | 152-476 |
Cow position: | chr26:6793906-6794245 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 226 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 35, 208 |
Conread position: | 168-485 |
Cow position: | chr26:6006264-6005949 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 229 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 20, 129 |
Conread position: | 168-496 |
Cow position: | chr26:20129893-20129560 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 215 |
Conread position: | 168-503 |
Cow position: | chr26:17204357-17204018 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 54 |
Conread position: | 174-503 |
Cow position: | chr26:32866100-32865765 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 230 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 26, 108 |
Conread position: | 178-503 |
Cow position: | chr26:21339618-21339928 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 229 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 78, 157 |
Conread position: | 191-503 |
Cow position: | chr26:19110708-19111040 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 240 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 61, 214 |
Conread position: | 201-502 |
Cow position: | chr26:3019612-3019292 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 204-503 |
Cow position: | chr26:30605545-30605240 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 7, 186 |
Conread position: | 208-503 |
Cow position: | chr26:10292420-10292728 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 213 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 125, 42 |
Conread position: | 221-446 |
Cow position: | chr26:22249646-22249408 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 23, 151 |
Conread position: | 221-489 |
Cow position: | chr26:19178456-19178713 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 14, 40 |
Conread position: | 234-486 |
Cow position: | chr26:8642795-8643052 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 180 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 22, 26 |
Conread position: | 238-503 |
Cow position: | chr26:27585627-27585898 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 174 |
Conread position: | 239-503 |
Cow position: | chr26:12519872-12520154 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 210 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 23, 74 |
Conread position: | 239-503 |
Cow position: | chr26:22975130-22975392 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 191 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 13, 133 |
Conread position: | 252-439 |
Cow position: | chr26:33194518-33194703 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 21, 7 |
Conread position: | 271-502 |
Cow position: | chr26:5171910-5171684 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 20, 70 |
Conread position: | 273-500 |
Cow position: | chr26:6470380-6470152 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 156 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 33 |
Conread position: | 279-503 |
Cow position: | chr26:18719153-18719380 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 54, 96 |
Conread position: | 281-503 |
Cow position: | chr26:17155424-17155203 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 11, 95 |
Conread position: | 284-503 |
Cow position: | chr26:21578176-21577974 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 292-503 |
Cow position: | chr26:7955771-7955978 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 131, 29 |
Conread position: | 293-503 |
Cow position: | chr26:29244311-29244523 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 157 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 9, 159 |
Conread position: | 324-503 |
Cow position: | chr26:7162467-7162285 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 130 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 98, 43 |
Conread position: | 329-503 |
Cow position: | chr26:34119087-34118908 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 96, 128 |
Conread position: | 334-503 |
Cow position: | chr26:11568014-11567847 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 342-503 |
Cow position: | chr26:19903343-19903506 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 31, 26 |
Conread position: | 344-503 |
Cow position: | chr26:32854318-32854161 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 355-500 |
Cow position: | chr26:34521547-34521695 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 355-503 |
Cow position: | chr26:24183067-24182923 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 366-503 |
Cow position: | chr26:19935370-19935235 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 112 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 378-503 |
Cow position: | chr26:10523449-10523326 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 105 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 384-489 |
Cow position: | chr26:8823722-8823827 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 85 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 393-488 |
Cow position: | chr26:21057421-21057326 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 81 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.