Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               5-481
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               325
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               184, 64
               

               Conread position:
               5-503
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               6-491
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 63
               

               Conread position:
               7-411
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               8-441
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               179, 61
               

               Conread position:
               8-485
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               8-494
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               8-495
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 29
               

               Conread position:
               8-500
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               8-503
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 49
               

               Conread position:
               9-269
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               179, 9
               

               Conread position:
               9-318
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               9-367
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               13-380
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               113, 19
               

               Conread position:
               13-502
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 55
               

               Conread position:
               14-442
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               14-481
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               14-486
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 55
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               318
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               224, 55
               

               Conread position:
               14-500
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 29
               

               Conread position:
               18-503
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               56-492
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               291
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               81-503
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               99-392
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               122-503
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               129-503
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 6
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               127, 48
               

               Conread position:
               137-503
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               140-491
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               140-503
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 55
               

               Conread position:
               141-482
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               141-503
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               142-500
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               46, 118
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               143-491
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 175
               

               Conread position:
               144-413
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               146-503
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               149-503
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 127
               

               Conread position:
               153-503
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               156-491
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               163-503
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               166-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 253
               

               Conread position:
               166-495
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               11, 107
               

               Conread position:
               168-381
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               169-503
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               170-486
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 147
               

               Conread position:
               186-389
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 96
               

               Conread position:
               193-503
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 104
               

               Conread position:
               200-487
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               68, 199
               

               Conread position:
               203-490
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 174
               

               Conread position:
               204-497
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               217-490
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               220-475
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               220-503
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               236-491
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               258-503
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               156, 11
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               273-503
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               273-503
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               280-501
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               284-495
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               324-503
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               330-485
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               338-477
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               366-503
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               377-503
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               379-503
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-503
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               406-503
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.