Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               4-503
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 15
               

               Conread position:
               5-479
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 38
               

               Conread position:
               5-503
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 64
               

               Conread position:
               6-477
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               6-495
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 65
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 28
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 64
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 63
               

               Conread position:
               7-441
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               7-495
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 44
               

               Conread position:
               7-503
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 63
               

               Conread position:
               8-469
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 61
               

               Conread position:
               8-496
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               8-502
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 61
               

               Conread position:
               13-503
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               324
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               15-426
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               15-503
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 54
               

               Conread position:
               16-491
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 53
               

               Conread position:
               27-500
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               29-320
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               29-426
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               157, 40
               

               Conread position:
               67-491
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               114, 176
               

               Conread position:
               88-503
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               91-401
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               99-375
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               99-503
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               110-503
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               121-386
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               129-488
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               135-469
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               135-491
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               140-495
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               141-503
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               142-490
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               32, 174
               

               Conread position:
               142-491
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               6, 205
               

               Conread position:
               142-495
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               142-501
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               256
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               144-481
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               146-491
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 58
               

               Conread position:
               148-503
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               149-500
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               151-370
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               153-494
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               164-479
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               167-489
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               168-491
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               168-491
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               170-503
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               186-424
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 128
               

               Conread position:
               192-502
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               195-495
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 175
               

               Conread position:
               210-503
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 288
               

               Conread position:
               215-491
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               219-496
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               230-503
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               236-503
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               26, 148
               

               Conread position:
               237-502
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               251-503
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 107
               

               Conread position:
               273-495
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               274-498
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               279-500
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               286-477
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               287-503
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               288-482
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               298-503
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               310-491
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               330-503
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               340-502
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               347-496
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               366-503
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               372-496
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               382-501
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               383-491
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               399-503
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               96, 0
               
Show alignments to all cow chromosomes.