Cow genome map
| Conread name: | rpfco0129_n4.y1 |
| Conread position: | 1-447 |
| Cow position: | chr4:3439987-3440447 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 3-495 |
| Cow position: | chr4:21073577-21073061 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 353 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 3-500 |
| Cow position: | chr4:6443484-6442988 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 3-502 |
| Cow position: | chr4:45918626-45919135 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 3-503 |
| Cow position: | chr4:2121799-2121297 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 3-503 |
| Cow position: | chr4:10992604-10992099 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 3-503 |
| Cow position: | chr4:23382208-23381716 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 3-503 |
| Cow position: | chr4:36812980-36813480 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 5-399 |
| Cow position: | chr4:3475214-3475624 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 120, 64 |
| Conread position: | 5-446 |
| Cow position: | chr4:28399801-28399372 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 64 |
| Conread position: | 5-446 |
| Cow position: | chr4:39231926-39231476 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 31 |
| Conread position: | 5-447 |
| Cow position: | chr4:16339991-16339558 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 16 |
| Conread position: | 5-479 |
| Cow position: | chr4:59871101-59871554 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 5-491 |
| Cow position: | chr4:242823-243321 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 327 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 5-491 |
| Cow position: | chr4:3850154-3850643 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 29 |
| Conread position: | 6-405 |
| Cow position: | chr4:46861979-46861593 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 6-446 |
| Cow position: | chr4:15623439-15623895 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 6-486 |
| Cow position: | chr4:28378046-28377580 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 32 |
| Conread position: | 6-491 |
| Cow position: | chr4:58707584-58707090 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 63 |
| Conread position: | 6-503 |
| Cow position: | chr4:22115189-22115707 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 6-503 |
| Cow position: | chr4:48499429-48499918 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 63 |
| Conread position: | 6-503 |
| Cow position: | chr4:54146891-54146365 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 7-502 |
| Cow position: | chr4:25906727-25906239 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 31 |
| Conread position: | 7-503 |
| Cow position: | chr4:17379218-17378744 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 62 |
| Conread position: | 8-375 |
| Cow position: | chr4:61190919-61190547 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 8-427 |
| Cow position: | chr4:38181292-38181705 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 61 |
| Conread position: | 8-482 |
| Cow position: | chr4:31634949-31634490 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 8-485 |
| Cow position: | chr4:12697243-12697722 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 61 |
| Conread position: | 8-491 |
| Cow position: | chr4:45235267-45234782 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 8-495 |
| Cow position: | chr4:25972498-25972992 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 61 |
| Conread position: | 8-503 |
| Cow position: | chr4:61304821-61304311 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 61 |
| Conread position: | 9-487 |
| Cow position: | chr4:62618107-62618603 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 9-503 |
| Cow position: | chr4:1373994-1374462 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 60 |
| Conread position: | 9-503 |
| Cow position: | chr4:19306856-19307356 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 60 |
| Conread position: | 10-446 |
| Cow position: | chr4:10055812-10056249 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 178, 59 |
| Conread position: | 13-423 |
| Cow position: | chr4:47774027-47773621 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 56 |
| Conread position: | 13-480 |
| Cow position: | chr4:23311656-23311185 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 56 |
| Conread position: | 14-432 |
| Cow position: | chr4:22138629-22138195 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 54 |
| Conread position: | 15-486 |
| Cow position: | chr4:20139922-20139430 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 21-495 |
| Cow position: | chr4:65116600-65116100 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 21-500 |
| Cow position: | chr4:58248024-58248501 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 22-422 |
| Cow position: | chr4:61399813-61399425 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 27-284 |
| Cow position: | chr4:53701157-53701411 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 229, 42 |
| Conread position: | 40-485 |
| Cow position: | chr4:65406724-65406286 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 27 |
| Conread position: | 40-503 |
| Cow position: | chr4:24188006-24187500 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 40-503 |
| Cow position: | chr4:44665738-44665270 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 45-387 |
| Cow position: | chr4:65168369-65168020 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 24 |
| Conread position: | 46-503 |
| Cow position: | chr4:22528744-22528285 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 50-447 |
| Cow position: | chr4:49001660-49001251 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 51-500 |
| Cow position: | chr4:23494570-23495020 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 53-480 |
| Cow position: | chr4:40414987-40414548 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 75-411 |
| Cow position: | chr4:48137579-48137918 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 113, 88 |
| Conread position: | 75-500 |
| Cow position: | chr4:44496051-44496470 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 294 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 78-317 |
| Cow position: | chr4:10412050-10412289 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 110, 58 |
| Conread position: | 78-482 |
| Cow position: | chr4:69508954-69509377 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 256 |
| Conread position: | 78-500 |
| Cow position: | chr4:56240178-56239760 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 257 |
| Conread position: | 88-284 |
| Cow position: | chr4:31561617-31561420 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 98-305 |
| Cow position: | chr4:22567565-22567776 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 99-503 |
| Cow position: | chr4:40623396-40622999 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 108-447 |
| Cow position: | chr4:37828139-37827803 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 117 |
| Conread position: | 110-503 |
| Cow position: | chr4:26373968-26373573 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 112-503 |
| Cow position: | chr4:53752219-53752624 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 116-502 |
| Cow position: | chr4:9845631-9846014 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 121-491 |
| Cow position: | chr4:39128242-39128628 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 122-317 |
| Cow position: | chr4:39455767-39455960 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 122-500 |
| Cow position: | chr4:45775628-45775238 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 134-486 |
| Cow position: | chr4:8801227-8801589 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 134-486 |
| Cow position: | chr4:56570529-56570893 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 135-372 |
| Cow position: | chr4:24415010-24415256 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 212 |
| Conread position: | 135-427 |
| Cow position: | chr4:6792167-6792460 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 135-503 |
| Cow position: | chr4:20279065-20279430 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 135-503 |
| Cow position: | chr4:51122782-51123169 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 136-291 |
| Cow position: | chr4:31175024-31175185 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 136-491 |
| Cow position: | chr4:33395962-33395607 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 137-444 |
| Cow position: | chr4:58261426-58261107 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 142-468 |
| Cow position: | chr4:9821888-9822214 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 142-472 |
| Cow position: | chr4:32748927-32749270 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 6, 241 |
| Conread position: | 142-481 |
| Cow position: | chr4:46456315-46455988 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 142-503 |
| Cow position: | chr4:46083164-46082804 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 196 |
| Conread position: | 142-503 |
| Cow position: | chr4:58948184-58947819 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 142-503 |
| Cow position: | chr4:61624858-61624484 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 144-386 |
| Cow position: | chr4:62411608-62411862 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 144-480 |
| Cow position: | chr4:22345281-22344942 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 144-489 |
| Cow position: | chr4:33030295-33030638 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 144-502 |
| Cow position: | chr4:7213851-7213497 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 145-430 |
| Cow position: | chr4:27561131-27561422 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 228 |
| Conread position: | 145-503 |
| Cow position: | chr4:21365149-21365504 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 146-491 |
| Cow position: | chr4:32725960-32726315 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 146-503 |
| Cow position: | chr4:18439837-18439467 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 146-503 |
| Cow position: | chr4:22249707-22249347 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 146-503 |
| Cow position: | chr4:35471068-35471420 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 146-503 |
| Cow position: | chr4:40823379-40823010 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 147-500 |
| Cow position: | chr4:68795568-68795194 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 148-494 |
| Cow position: | chr4:35869953-35870299 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 148-503 |
| Cow position: | chr4:31172404-31172774 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 267 |
| Conread position: | 151-422 |
| Cow position: | chr4:12914060-12913779 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 152-503 |
| Cow position: | chr4:30131103-30131437 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 153-491 |
| Cow position: | chr4:45583385-45583032 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 209 |
| Conread position: | 167-488 |
| Cow position: | chr4:13406463-13406796 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 167-503 |
| Cow position: | chr4:5797730-5798068 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 173 |
| Conread position: | 168-287 |
| Cow position: | chr4:21250492-21250370 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 168-446 |
| Cow position: | chr4:13255853-13256127 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 168-495 |
| Cow position: | chr4:6208225-6208554 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 169-503 |
| Cow position: | chr4:27372099-27371761 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 101, 81 |
| Conread position: | 171-419 |
| Cow position: | chr4:27687684-27687941 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 172-503 |
| Cow position: | chr4:21258979-21259315 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 174-479 |
| Cow position: | chr4:14550615-14550918 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 91, 130 |
| Conread position: | 178-503 |
| Cow position: | chr4:9547747-9548054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 182-500 |
| Cow position: | chr4:36945419-36945095 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 186-486 |
| Cow position: | chr4:41602625-41602936 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 71, 127 |
| Conread position: | 187-502 |
| Cow position: | chr4:5554015-5553695 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 188 |
| Conread position: | 192-500 |
| Cow position: | chr4:39767128-39767448 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 297 |
| Conread position: | 200-503 |
| Cow position: | chr4:45952583-45952286 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 200-503 |
| Cow position: | chr4:68634754-68635051 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 207-500 |
| Cow position: | chr4:58858365-58858069 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 217-447 |
| Cow position: | chr4:44676001-44676239 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 231-503 |
| Cow position: | chr4:50769946-50769663 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 239-503 |
| Cow position: | chr4:23758634-23758905 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 179 |
| Conread position: | 240-503 |
| Cow position: | chr4:23166739-23167004 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 240-503 |
| Cow position: | chr4:30671574-30671313 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 241-503 |
| Cow position: | chr4:10837548-10837280 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 255-407 |
| Cow position: | chr4:45116211-45116055 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 259-503 |
| Cow position: | chr4:22235188-22235429 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 259-503 |
| Cow position: | chr4:52087788-52088028 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 260-501 |
| Cow position: | chr4:37880786-37881035 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 260-503 |
| Cow position: | chr4:24497963-24497727 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 269-446 |
| Cow position: | chr4:41154509-41154689 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 270-491 |
| Cow position: | chr4:51605742-51605523 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 271-503 |
| Cow position: | chr4:5913482-5913244 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 271-503 |
| Cow position: | chr4:20066354-20066119 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 215 |
| Conread position: | 272-503 |
| Cow position: | chr4:30771-30536 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 274-503 |
| Cow position: | chr4:58576482-58576265 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 277-503 |
| Cow position: | chr4:12995842-12996058 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 283-477 |
| Cow position: | chr4:33667079-33667272 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 143, 57 |
| Conread position: | 288-503 |
| Cow position: | chr4:21250144-21249925 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 135, 46 |
| Conread position: | 290-495 |
| Cow position: | chr4:5580441-5580652 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 295-480 |
| Cow position: | chr4:48283391-48283202 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 298-503 |
| Cow position: | chr4:29709871-29709664 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 298-503 |
| Cow position: | chr4:40434011-40433800 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 298-503 |
| Cow position: | chr4:60030804-60031005 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 131, 22 |
| Conread position: | 329-503 |
| Cow position: | chr4:3267937-3267763 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 337-503 |
| Cow position: | chr4:19729164-19729002 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 339-500 |
| Cow position: | chr4:5002700-5002861 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 350-503 |
| Cow position: | chr4:1799855-1800008 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-486 |
| Cow position: | chr4:38877713-38877844 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 371-503 |
| Cow position: | chr4:17304427-17304292 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 372-503 |
| Cow position: | chr4:44279969-44279834 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 374-501 |
| Cow position: | chr4:65604499-65604372 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 377-503 |
| Cow position: | chr4:59719582-59719704 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 385-503 |
| Cow position: | chr4:33681947-33682064 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 392-503 |
| Cow position: | chr4:24415553-24415662 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.