Cow genome map

Conread name: rpfco0129_n4.y1

Conread position: 3-317
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 16

Conread position: 3-483
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 10

Conread position: 3-491
Cow position:
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 69

Conread position: 3-503
Cow position:
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 66

Conread position: 3-503
Cow position:
Alignm length: 517
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 66

Conread position: 3-503
Cow position:
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 66

Conread position: 3-503
Cow position:
Alignm length: 541
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 4-293
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 183, 13

Conread position: 5-352
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 182, 64

Conread position: 5-503
Cow position:
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 6-379
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 236, 66

Conread position: 6-458
Cow position:
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 6-491
Cow position:
Alignm length: 505
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 6-501
Cow position:
Alignm length: 511
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 37

Conread position: 6-503
Cow position:
Alignm length: 509
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 34

Conread position: 6-503
Cow position:
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 63

Conread position: 6-503
Cow position:
Alignm length: 513
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 63

Conread position: 7-503
Cow position:
Alignm length: 525
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 27

Conread position: 8-503
Cow position:
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 23

Conread position: 9-503
Cow position:
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 12-495
Cow position:
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 20

Conread position: 13-503
Cow position:
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 14-446
Cow position:
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 34

Conread position: 14-482
Cow position:
Alignm length: 482
Alignm identity: 322
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 174, 55

Conread position: 14-486
Cow position:
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 14-500
Cow position:
Alignm length: 517
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 58

Conread position: 14-500
Cow position:
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 29

Conread position: 15-488
Cow position:
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 54

Conread position: 21-477
Cow position:
Alignm length: 467
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 23-490
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 46

Conread position: 27-482
Cow position:
Alignm length: 471
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 42

Conread position: 27-485
Cow position:
Alignm length: 468
Alignm identity: 307
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 161, 42

Conread position: 28-503
Cow position:
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 41

Conread position: 44-376
Cow position:
Alignm length: 343
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 144, 25

Conread position: 58-500
Cow position:
Alignm length: 457
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 11

Conread position: 60-500
Cow position:
Alignm length: 464
Alignm identity: 313
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 9

Conread position: 60-500
Cow position:
Alignm length: 458
Alignm identity: 309
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 88, 9

Conread position: 81-474
Cow position:
Alignm length: 413
Alignm identity: 272
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 54

Conread position: 89-498
Cow position:
Alignm length: 435
Alignm identity: 293
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 136

Conread position: 103-500
Cow position:
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 107-503
Cow position:
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 108-495
Cow position:
Alignm length: 401
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 60

Conread position: 108-503
Cow position:
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 159

Conread position: 110-490
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 208

Conread position: 110-503
Cow position:
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 289

Conread position: 111-503
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 15

Conread position: 119-502
Cow position:
Alignm length: 396
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 16

Conread position: 120-503
Cow position:
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 134-503
Cow position:
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 34

Conread position: 135-418
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 122

Conread position: 135-491
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 33

Conread position: 135-503
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 166

Conread position: 136-427
Cow position:
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 52, 40

Conread position: 136-486
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 33

Conread position: 136-500
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 116, 32

Conread position: 138-407
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 73

Conread position: 139-424
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 96

Conread position: 140-491
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 140-500
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 140-503
Cow position:
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 248

Conread position: 141-503
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 262

Conread position: 142-412
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 142-443
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 92

Conread position: 142-446
Cow position:
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 73

Conread position: 142-495
Cow position:
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 233

Conread position: 142-503
Cow position:
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 31

Conread position: 145-503
Cow position:
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 146-436
Cow position:
Alignm length: 303
Alignm identity: 207
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 41, 22

Conread position: 146-503
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 212

Conread position: 147-482
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 224

Conread position: 147-500
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 50

Conread position: 149-503
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 29

Conread position: 152-503
Cow position:
Alignm length: 375
Alignm identity: 258
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 225

Conread position: 153-495
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 50

Conread position: 154-503
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 65

Conread position: 155-503
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 174

Conread position: 162-503
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 89

Conread position: 169-503
Cow position:
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 126

Conread position: 171-503
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 226

Conread position: 178-502
Cow position:
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 209

Conread position: 181-499
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 45

Conread position: 181-503
Cow position:
Alignm length: 329
Alignm identity: 223
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 109

Conread position: 189-494
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 37, 67

Conread position: 194-481
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 111

Conread position: 201-477
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 182

Conread position: 205-486
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 87

Conread position: 207-491
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 170

Conread position: 212-482
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 179

Conread position: 213-503
Cow position:
Alignm length: 304
Alignm identity: 225
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 9

Conread position: 218-503
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 75

Conread position: 218-503
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 110

Conread position: 218-503
Cow position:
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 123

Conread position: 219-503
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 75

Conread position: 221-503
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 112, 28

Conread position: 225-502
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 155

Conread position: 230-503
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 29

Conread position: 231-445
Cow position:
Alignm length: 223
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 95

Conread position: 231-472
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 29

Conread position: 231-500
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 81

Conread position: 233-503
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 55

Conread position: 246-503
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 44

Conread position: 259-491
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 82

Conread position: 261-491
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 48

Conread position: 269-492
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 38

Conread position: 269-502
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 98

Conread position: 269-503
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 102

Conread position: 269-503
Cow position:
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 270-491
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 39

Conread position: 270-503
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 68

Conread position: 271-495
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 17

Conread position: 271-496
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 279-503
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 206

Conread position: 283-503
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 88

Conread position: 296-500
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 41

Conread position: 301-503
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 31

Conread position: 308-500
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 28

Conread position: 312-501
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 60

Conread position: 322-503
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 326-503
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 126

Conread position: 337-460
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 35

Conread position: 337-503
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 337-503
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 40

Conread position: 337-503
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 337-503
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 351-493
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 12

Conread position: 354-503
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 359-503
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 365-494
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 374-503
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 397-503
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 397-503
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 400-503
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.