Cow genome map
| Conread name: | rpfco0129_n4.y1 |
| Conread position: | 3-317 |
| Cow position: | chr5:31604993-31604689 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 3-483 |
| Cow position: | chr5:15088817-15089293 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 10 |
| Conread position: | 3-491 |
| Cow position: | chr5:68480834-68481346 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 3-503 |
| Cow position: | chr5:6896497-6895991 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 66 |
| Conread position: | 3-503 |
| Cow position: | chr5:17027725-17028231 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 66 |
| Conread position: | 3-503 |
| Cow position: | chr5:26376195-26376680 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 66 |
| Conread position: | 3-503 |
| Cow position: | chr5:34232355-34232887 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 67 |
| Conread position: | 4-293 |
| Cow position: | chr5:32336419-32336136 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 183, 13 |
| Conread position: | 5-352 |
| Cow position: | chr5:31433906-31434244 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 182, 64 |
| Conread position: | 5-503 |
| Cow position: | chr5:27615131-27615648 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 6-379 |
| Cow position: | chr5:39710486-39710852 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 236, 66 |
| Conread position: | 6-458 |
| Cow position: | chr5:45940984-45940521 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 6-491 |
| Cow position: | chr5:18276120-18276602 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 6-501 |
| Cow position: | chr5:68082328-68081839 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 6-503 |
| Cow position: | chr5:28946423-28945924 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 34 |
| Conread position: | 6-503 |
| Cow position: | chr5:30978015-30978489 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 6-503 |
| Cow position: | chr5:58748399-58748905 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 63 |
| Conread position: | 7-503 |
| Cow position: | chr5:34183854-34184359 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 27 |
| Conread position: | 8-503 |
| Cow position: | chr5:41604244-41604759 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 9-503 |
| Cow position: | chr5:4630757-4631237 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 12-495 |
| Cow position: | chr5:72172672-72173145 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 20 |
| Conread position: | 13-503 |
| Cow position: | chr5:23641352-23640881 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 14-446 |
| Cow position: | chr5:34528203-34528625 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 34 |
| Conread position: | 14-482 |
| Cow position: | chr5:56467343-56467805 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 174, 55 |
| Conread position: | 14-486 |
| Cow position: | chr5:21040336-21039863 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 14-500 |
| Cow position: | chr5:15478747-15479258 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 14-500 |
| Cow position: | chr5:59303629-59303148 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 29 |
| Conread position: | 15-488 |
| Cow position: | chr5:40711813-40711319 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 21-477 |
| Cow position: | chr5:40233779-40234230 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 23-490 |
| Cow position: | chr5:35209825-35209354 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 46 |
| Conread position: | 27-482 |
| Cow position: | chr5:38805693-38805230 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 42 |
| Conread position: | 27-485 |
| Cow position: | chr5:32697146-32696704 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 307 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 161, 42 |
| Conread position: | 28-503 |
| Cow position: | chr5:30332588-30333086 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 44-376 |
| Cow position: | chr5:43330025-43329685 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 144, 25 |
| Conread position: | 58-500 |
| Cow position: | chr5:27103109-27102661 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 60-500 |
| Cow position: | chr5:39695339-39695784 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 60-500 |
| Cow position: | chr5:41599014-41598579 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 81-474 |
| Cow position: | chr5:328475-328083 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 89-498 |
| Cow position: | chr5:21167424-21167001 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 36, 136 |
| Conread position: | 103-500 |
| Cow position: | chr5:26595378-26594966 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 107-503 |
| Cow position: | chr5:1344132-1343720 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 108-495 |
| Cow position: | chr5:22934725-22934328 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 108-503 |
| Cow position: | chr5:51502742-51503139 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 159 |
| Conread position: | 110-490 |
| Cow position: | chr5:17999763-17999374 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 208 |
| Conread position: | 110-503 |
| Cow position: | chr5:14153875-14154283 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 289 |
| Conread position: | 111-503 |
| Cow position: | chr5:61488374-61487976 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 119-502 |
| Cow position: | chr5:19905535-19905148 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 120-503 |
| Cow position: | chr5:23367030-23366629 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 134-503 |
| Cow position: | chr5:17869472-17869821 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 135-418 |
| Cow position: | chr5:72310471-72310751 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 135-491 |
| Cow position: | chr5:51999977-52000342 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 135-503 |
| Cow position: | chr5:31786011-31786357 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 166 |
| Conread position: | 136-427 |
| Cow position: | chr5:26099611-26099323 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 136-486 |
| Cow position: | chr5:20779622-20779278 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 136-500 |
| Cow position: | chr5:25919855-25919502 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 138-407 |
| Cow position: | chr5:66831953-66831675 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 139-424 |
| Cow position: | chr5:36854974-36855256 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 140-491 |
| Cow position: | chr5:22839710-22839353 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 140-500 |
| Cow position: | chr5:46798015-46798375 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 140-503 |
| Cow position: | chr5:64398765-64399144 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 248 |
| Conread position: | 141-503 |
| Cow position: | chr5:48144027-48143653 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 262 |
| Conread position: | 142-412 |
| Cow position: | chr5:37714140-37713854 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 142-443 |
| Cow position: | chr5:40928208-40927911 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 142-446 |
| Cow position: | chr5:34300690-34300990 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 142-495 |
| Cow position: | chr5:55989506-55989868 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 233 |
| Conread position: | 142-503 |
| Cow position: | chr5:26046099-26046458 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 145-503 |
| Cow position: | chr5:41636641-41637000 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 146-436 |
| Cow position: | chr5:12709655-12709953 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 146-503 |
| Cow position: | chr5:69773340-69773681 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 212 |
| Conread position: | 147-482 |
| Cow position: | chr5:3771616-3771961 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 224 |
| Conread position: | 147-500 |
| Cow position: | chr5:41713085-41713432 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 149-503 |
| Cow position: | chr5:25900092-25899738 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 152-503 |
| Cow position: | chr5:18104376-18104011 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 22, 225 |
| Conread position: | 153-495 |
| Cow position: | chr5:27411614-27411273 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 154-503 |
| Cow position: | chr5:48757721-48758076 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 155-503 |
| Cow position: | chr5:50425700-50425351 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 174 |
| Conread position: | 162-503 |
| Cow position: | chr5:31660856-31660521 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 169-503 |
| Cow position: | chr5:39442085-39442432 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 171-503 |
| Cow position: | chr5:1688319-1687979 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 226 |
| Conread position: | 178-502 |
| Cow position: | chr5:32282131-32282468 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 209 |
| Conread position: | 181-499 |
| Cow position: | chr5:3649656-3649330 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 181-503 |
| Cow position: | chr5:24361338-24361649 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 109 |
| Conread position: | 189-494 |
| Cow position: | chr5:31561348-31561662 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 194-481 |
| Cow position: | chr5:55928760-55929058 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 201-477 |
| Cow position: | chr5:36486310-36486603 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 42, 182 |
| Conread position: | 205-486 |
| Cow position: | chr5:16214515-16214807 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 207-491 |
| Cow position: | chr5:7552588-7552291 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 170 |
| Conread position: | 212-482 |
| Cow position: | chr5:34167796-34168078 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 213-503 |
| Cow position: | chr5:73526214-73526502 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 218-503 |
| Cow position: | chr5:3752707-3752987 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 218-503 |
| Cow position: | chr5:38629129-38629422 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 218-503 |
| Cow position: | chr5:54089880-54090171 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 219-503 |
| Cow position: | chr5:37068734-37069019 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 221-503 |
| Cow position: | chr5:33265602-33265331 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 225-502 |
| Cow position: | chr5:44417506-44417227 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 155 |
| Conread position: | 230-503 |
| Cow position: | chr5:29844137-29844416 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 231-445 |
| Cow position: | chr5:39182056-39181839 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 231-472 |
| Cow position: | chr5:48405319-48405072 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 231-500 |
| Cow position: | chr5:39874980-39875257 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 233-503 |
| Cow position: | chr5:73556329-73556060 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 246-503 |
| Cow position: | chr5:63188454-63188191 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 259-491 |
| Cow position: | chr5:60747390-60747156 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 261-491 |
| Cow position: | chr5:58446691-58446931 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 269-492 |
| Cow position: | chr5:6891120-6890897 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 269-502 |
| Cow position: | chr5:36407056-36407286 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 269-503 |
| Cow position: | chr5:4927669-4927431 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 269-503 |
| Cow position: | chr5:49567328-49567560 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 270-491 |
| Cow position: | chr5:23678805-23678579 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 270-503 |
| Cow position: | chr5:18553798-18554028 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 271-495 |
| Cow position: | chr5:47681102-47680890 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 271-496 |
| Cow position: | chr5:21535215-21534982 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 279-503 |
| Cow position: | chr5:59449666-59449436 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 206 |
| Conread position: | 283-503 |
| Cow position: | chr5:17267983-17267756 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 296-500 |
| Cow position: | chr5:41945777-41945982 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 301-503 |
| Cow position: | chr5:15482971-15483168 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 126, 31 |
| Conread position: | 308-500 |
| Cow position: | chr5:66189929-66190117 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 312-501 |
| Cow position: | chr5:45396468-45396279 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 322-503 |
| Cow position: | chr5:34279645-34279471 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 326-503 |
| Cow position: | chr5:34914598-34914416 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 126 |
| Conread position: | 337-460 |
| Cow position: | chr5:60646925-60647047 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 337-503 |
| Cow position: | chr5:21195146-21194987 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 337-503 |
| Cow position: | chr5:36487728-36487559 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 337-503 |
| Cow position: | chr5:49656054-49655892 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 337-503 |
| Cow position: | chr5:67150043-67149882 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 351-493 |
| Cow position: | chr5:6987433-6987575 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 354-503 |
| Cow position: | chr5:58343841-58343994 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 359-503 |
| Cow position: | chr5:75687344-75687189 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 365-494 |
| Cow position: | chr5:2267246-2267374 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 374-503 |
| Cow position: | chr5:54532993-54533121 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 397-503 |
| Cow position: | chr5:2819287-2819394 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 397-503 |
| Cow position: | chr5:3058949-3059055 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 400-503 |
| Cow position: | chr5:21356857-21356753 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.