Cow genome map

Conread name: rpfco0129_n4.y1

Conread position: 3-251
Cow position: chr6:18977261-18977513 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 15

Conread position: 3-294
Cow position: chr6:66751519-66751819 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 30

Conread position: 3-317
Cow position: chr6:64426834-64427152 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 6, 31

Conread position: 3-411
Cow position: chr6:23987093-23986692 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 34

Conread position: 3-430
Cow position: chr6:50800771-50800343 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 67

Conread position: 3-503
Cow position: chr6:6944033-6943531 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 69

Conread position: 3-503
Cow position: chr6:24649496-24649994 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 31

Conread position: 4-272
Cow position: chr6:24557260-24557549 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 65

Conread position: 4-491
Cow position: chr6:24781922-24781422 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 5-492
Cow position: chr6:24004190-24004676 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 5-492
Cow position: chr6:36652073-36652561 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 64

Conread position: 5-503
Cow position: chr6:16625591-16626099 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 68

Conread position: 5-503
Cow position: chr6:44510879-44511386 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 35

Conread position: 6-426
Cow position: chr6:16675470-16675872 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 63

Conread position: 6-473
Cow position: chr6:11789046-11789508 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 63

Conread position: 6-491
Cow position: chr6:54357730-54357230 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 29

Conread position: 6-503
Cow position: chr6:19427094-19427600 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 63

Conread position: 6-503
Cow position: chr6:20379847-20379329 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 64

Conread position: 6-503
Cow position: chr6:24583591-24583082 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 63

Conread position: 6-503
Cow position: chr6:24623338-24622824 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 70

Conread position: 7-503
Cow position: chr6:59507992-59508506 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 78

Conread position: 8-353
Cow position: chr6:68297935-68297587 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 62

Conread position: 8-470
Cow position: chr6:34549057-34549518 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 316
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 124, 29

Conread position: 8-471
Cow position: chr6:12387674-12387220 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 61

Conread position: 8-483
Cow position: chr6:33852137-33851668 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 60

Conread position: 8-486
Cow position: chr6:58073689-58074181 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 8-495
Cow position: chr6:25783959-25784446 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 61

Conread position: 8-503
Cow position: chr6:2324548-2324074 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 37

Conread position: 8-503
Cow position: chr6:8318519-8318017 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 61

Conread position: 8-503
Cow position: chr6:48807342-48806859 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 61

Conread position: 8-503
Cow position: chr6:55842514-55842014 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 60

Conread position: 9-487
Cow position: chr6:49627003-49627474 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 312
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 13

Conread position: 10-491
Cow position: chr6:6596236-6596709 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 10-503
Cow position: chr6:44372290-44371791 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 12-500
Cow position: chr6:35990576-35990087 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 13-284
Cow position: chr6:33147715-33147986 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 173, 9

Conread position: 13-320
Cow position: chr6:41824177-41823859 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 151, 56

Conread position: 13-427
Cow position: chr6:52556820-52556411 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 56

Conread position: 13-501
Cow position: chr6:52002021-52002503 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 56

Conread position: 14-399
Cow position: chr6:20231168-20230785 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 254, 8

Conread position: 14-426
Cow position: chr6:47304980-47305409 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 160, 54

Conread position: 14-451
Cow position: chr6:44098740-44099183 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 59

Conread position: 16-488
Cow position: chr6:456835-457312 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 321
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 81, 53

Conread position: 23-503
Cow position: chr6:16634548-16634077 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 46

Conread position: 28-503
Cow position: chr6:18583127-18582666 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 30-375
Cow position: chr6:60152704-60153057 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 39

Conread position: 50-436
Cow position: chr6:58315736-58316127 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 7

Conread position: 53-446
Cow position: chr6:12337676-12338085 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 16

Conread position: 66-375
Cow position: chr6:27852001-27851690 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 120, 102

Conread position: 74-426
Cow position: chr6:17248443-17248786 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 136

Conread position: 77-479
Cow position: chr6:18987931-18988334 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 91

Conread position: 77-495
Cow position: chr6:4022819-4023243 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 70

Conread position: 77-497
Cow position: chr6:60057951-60057510 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 226

Conread position: 78-495
Cow position: chr6:51387481-51387891 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 58

Conread position: 88-503
Cow position: chr6:57119202-57118792 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 41

Conread position: 94-385
Cow position: chr6:32337141-32337415 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 65

Conread position: 108-427
Cow position: chr6:67950706-67951024 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 21

Conread position: 108-503
Cow position: chr6:29413016-29412639 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 206

Conread position: 132-495
Cow position: chr6:24223391-24223017 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 135-374
Cow position: chr6:388943-389194 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 69

Conread position: 135-493
Cow position: chr6:47327296-47326933 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 239

Conread position: 135-495
Cow position: chr6:42617660-42618023 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 82, 18

Conread position: 135-500
Cow position: chr6:56376575-56376202 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 42

Conread position: 135-503
Cow position: chr6:2582647-2583009 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 135-503
Cow position: chr6:7824535-7824897 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 135-503
Cow position: chr6:9026289-9026669 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 246

Conread position: 135-503
Cow position: chr6:17534741-17534368 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 40

Conread position: 135-503
Cow position: chr6:37053787-37054134 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 87

Conread position: 135-503
Cow position: chr6:48573110-48572730 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 31

Conread position: 136-503
Cow position: chr6:7173991-7173603 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 52, 263

Conread position: 137-441
Cow position: chr6:22968848-22969165 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 250

Conread position: 138-376
Cow position: chr6:17669084-17669315 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 70

Conread position: 138-503
Cow position: chr6:41264901-41265260 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 36

Conread position: 141-427
Cow position: chr6:38614602-38614888 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 104

Conread position: 142-302
Cow position: chr6:9453889-9454047 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 26

Conread position: 142-487
Cow position: chr6:30474110-30474462 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 103, 36

Conread position: 142-500
Cow position: chr6:45065227-45064870 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 74

Conread position: 142-503
Cow position: chr6:6995165-6994809 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 20

Conread position: 142-503
Cow position: chr6:64436551-64436182 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 221

Conread position: 143-441
Cow position: chr6:1907319-1907628 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 208

Conread position: 143-500
Cow position: chr6:35435783-35436141 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 30, 112

Conread position: 144-474
Cow position: chr6:35415740-35415395 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 144-495
Cow position: chr6:38018055-38018403 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 37, 95

Conread position: 145-500
Cow position: chr6:21737102-21736746 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 12, 81

Conread position: 145-502
Cow position: chr6:31425781-31425409 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 163

Conread position: 146-485
Cow position: chr6:33984748-33985104 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 10, 247

Conread position: 148-317
Cow position: chr6:55366538-55366357 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 150-503
Cow position: chr6:827919-827558 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 233

Conread position: 152-491
Cow position: chr6:23532452-23532792 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 162

Conread position: 160-503
Cow position: chr6:15782728-15782365 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 166-503
Cow position: chr6:32276733-32277095 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 196

Conread position: 168-317
Cow position: chr6:10705966-10705809 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 168-490
Cow position: chr6:2366303-2365976 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 168-491
Cow position: chr6:3545509-3545817 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 71

Conread position: 168-495
Cow position: chr6:12652011-12652344 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 168

Conread position: 168-495
Cow position: chr6:39158154-39157833 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 97

Conread position: 168-503
Cow position: chr6:6367856-6367522 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 168-503
Cow position: chr6:24545422-24545763 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 93

Conread position: 168-503
Cow position: chr6:50271289-50270962 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 168-503
Cow position: chr6:54144106-54144452 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 224

Conread position: 169-316
Cow position: chr6:16220221-16220065 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 169-491
Cow position: chr6:59069822-59069482 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 155

Conread position: 171-503
Cow position: chr6:65871705-65872038 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 127

Conread position: 173-491
Cow position: chr6:8788227-8787899 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 87

Conread position: 174-497
Cow position: chr6:32412807-32412496 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 51, 126

Conread position: 175-480
Cow position: chr6:47799110-47799420 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 42

Conread position: 178-503
Cow position: chr6:16620410-16620730 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 90

Conread position: 185-447
Cow position: chr6:32677257-32676989 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 90

Conread position: 187-474
Cow position: chr6:65947263-65946960 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 201

Conread position: 192-491
Cow position: chr6:5114217-5113915 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 165

Conread position: 193-502
Cow position: chr6:37739017-37739323 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 176

Conread position: 200-478
Cow position: chr6:12543095-12542805 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 155

Conread position: 200-502
Cow position: chr6:50318218-50317896 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 181

Conread position: 203-479
Cow position: chr6:47204314-47204601 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 181

Conread position: 207-503
Cow position: chr6:36194432-36194745 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 125

Conread position: 213-503
Cow position: chr6:37611973-37612255 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 84

Conread position: 216-472
Cow position: chr6:55892616-55892886 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 156

Conread position: 216-491
Cow position: chr6:582413-582135 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 26

Conread position: 217-503
Cow position: chr6:50034860-50034580 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 32

Conread position: 225-503
Cow position: chr6:30160186-30160468 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 116

Conread position: 226-500
Cow position: chr6:51840134-51840425 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 75

Conread position: 231-495
Cow position: chr6:53673732-53674005 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 233-503
Cow position: chr6:38453911-38453632 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 226

Conread position: 250-491
Cow position: chr6:20196401-20196165 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 9

Conread position: 254-503
Cow position: chr6:61218134-61217881 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 5

Conread position: 260-503
Cow position: chr6:4164268-4164024 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 8, 21

Conread position: 260-503
Cow position: chr6:15025984-15025743 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 5

Conread position: 266-503
Cow position: chr6:16733323-16733564 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 98, 29

Conread position: 269-494
Cow position: chr6:35775072-35774843 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 67

Conread position: 269-501
Cow position: chr6:56860461-56860697 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 93

Conread position: 271-501
Cow position: chr6:59588493-59588261 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 204

Conread position: 273-477
Cow position: chr6:3078432-3078633 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 15

Conread position: 274-503
Cow position: chr6:15997296-15997068 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 64

Conread position: 275-502
Cow position: chr6:38914362-38914589 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 13

Conread position: 279-503
Cow position: chr6:24557803-24558028 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 54, 160

Conread position: 280-500
Cow position: chr6:33929626-33929400 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 14

Conread position: 282-503
Cow position: chr6:40737076-40736855 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 124

Conread position: 285-495
Cow position: chr6:54479225-54479009 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 103

Conread position: 287-479
Cow position: chr6:59633063-59633262 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 91

Conread position: 288-489
Cow position: chr6:40722-40515 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 100

Conread position: 290-477
Cow position: chr6:41679018-41679213 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 293-503
Cow position: chr6:54062604-54062810 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 170, 14

Conread position: 299-498
Cow position: chr6:38895166-38894968 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 86

Conread position: 300-495
Cow position: chr6:7835858-7836056 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 308-489
Cow position: chr6:7253176-7253005 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 324-503
Cow position: chr6:51294255-51294435 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 12

Conread position: 337-478
Cow position: chr6:43760350-43760486 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 337-484
Cow position: chr6:35069130-35068988 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 337-502
Cow position: chr6:47858270-47858432 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 0

Conread position: 337-503
Cow position: chr6:13718744-13718913 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 92, 32

Conread position: 337-503
Cow position: chr6:32798891-32798723 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 342-491
Cow position: chr6:50760787-50760937 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 352-503
Cow position: chr6:64427217-64427374 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 362-503
Cow position: chr6:18469220-18469083 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 365-502
Cow position: chr6:16220051-16219917 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 368-503
Cow position: chr6:52604769-52604633 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 369-503
Cow position: chr6:59496230-59496368 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 84

Conread position: 378-503
Cow position: chr6:28795357-28795488 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 392-495
Cow position: chr6:1890543-1890440 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 393-501
Cow position: chr6:10237373-10237481 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.