Cow genome map
| Conread name: | rpfco0129_n4.y1 |
| Conread position: | 3-251 |
| Cow position: | chr6:18977261-18977513 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 125, 15 |
| Conread position: | 3-294 |
| Cow position: | chr6:66751519-66751819 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 3-317 |
| Cow position: | chr6:64426834-64427152 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 3-411 |
| Cow position: | chr6:23987093-23986692 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 3-430 |
| Cow position: | chr6:50800771-50800343 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 3-503 |
| Cow position: | chr6:6944033-6943531 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 3-503 |
| Cow position: | chr6:24649496-24649994 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 4-272 |
| Cow position: | chr6:24557260-24557549 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 4-491 |
| Cow position: | chr6:24781922-24781422 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 5-492 |
| Cow position: | chr6:24004190-24004676 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 64 |
| Conread position: | 5-492 |
| Cow position: | chr6:36652073-36652561 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 64 |
| Conread position: | 5-503 |
| Cow position: | chr6:16625591-16626099 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 68 |
| Conread position: | 5-503 |
| Cow position: | chr6:44510879-44511386 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 6-426 |
| Cow position: | chr6:16675470-16675872 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 63 |
| Conread position: | 6-473 |
| Cow position: | chr6:11789046-11789508 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 63 |
| Conread position: | 6-491 |
| Cow position: | chr6:54357730-54357230 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 6-503 |
| Cow position: | chr6:19427094-19427600 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 63 |
| Conread position: | 6-503 |
| Cow position: | chr6:20379847-20379329 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 6-503 |
| Cow position: | chr6:24583591-24583082 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 6-503 |
| Cow position: | chr6:24623338-24622824 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 70 |
| Conread position: | 7-503 |
| Cow position: | chr6:59507992-59508506 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 8-353 |
| Cow position: | chr6:68297935-68297587 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 8-470 |
| Cow position: | chr6:34549057-34549518 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 316 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 124, 29 |
| Conread position: | 8-471 |
| Cow position: | chr6:12387674-12387220 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 61 |
| Conread position: | 8-483 |
| Cow position: | chr6:33852137-33851668 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 60 |
| Conread position: | 8-486 |
| Cow position: | chr6:58073689-58074181 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 8-495 |
| Cow position: | chr6:25783959-25784446 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 61 |
| Conread position: | 8-503 |
| Cow position: | chr6:2324548-2324074 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 37 |
| Conread position: | 8-503 |
| Cow position: | chr6:8318519-8318017 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 61 |
| Conread position: | 8-503 |
| Cow position: | chr6:48807342-48806859 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 8-503 |
| Cow position: | chr6:55842514-55842014 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 60 |
| Conread position: | 9-487 |
| Cow position: | chr6:49627003-49627474 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 10-491 |
| Cow position: | chr6:6596236-6596709 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 10-503 |
| Cow position: | chr6:44372290-44371791 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 59 |
| Conread position: | 12-500 |
| Cow position: | chr6:35990576-35990087 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 13-284 |
| Cow position: | chr6:33147715-33147986 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 13-320 |
| Cow position: | chr6:41824177-41823859 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 151, 56 |
| Conread position: | 13-427 |
| Cow position: | chr6:52556820-52556411 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 56 |
| Conread position: | 13-501 |
| Cow position: | chr6:52002021-52002503 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 56 |
| Conread position: | 14-399 |
| Cow position: | chr6:20231168-20230785 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 254, 8 |
| Conread position: | 14-426 |
| Cow position: | chr6:47304980-47305409 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 160, 54 |
| Conread position: | 14-451 |
| Cow position: | chr6:44098740-44099183 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 59 |
| Conread position: | 16-488 |
| Cow position: | chr6:456835-457312 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 23-503 |
| Cow position: | chr6:16634548-16634077 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 46 |
| Conread position: | 28-503 |
| Cow position: | chr6:18583127-18582666 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 30-375 |
| Cow position: | chr6:60152704-60153057 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 50-436 |
| Cow position: | chr6:58315736-58316127 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 53-446 |
| Cow position: | chr6:12337676-12338085 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 66-375 |
| Cow position: | chr6:27852001-27851690 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 102 |
| Conread position: | 74-426 |
| Cow position: | chr6:17248443-17248786 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 136 |
| Conread position: | 77-479 |
| Cow position: | chr6:18987931-18988334 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 77-495 |
| Cow position: | chr6:4022819-4023243 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 77-497 |
| Cow position: | chr6:60057951-60057510 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 71, 226 |
| Conread position: | 78-495 |
| Cow position: | chr6:51387481-51387891 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 58 |
| Conread position: | 88-503 |
| Cow position: | chr6:57119202-57118792 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 94-385 |
| Cow position: | chr6:32337141-32337415 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 108-427 |
| Cow position: | chr6:67950706-67951024 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 108-503 |
| Cow position: | chr6:29413016-29412639 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 206 |
| Conread position: | 132-495 |
| Cow position: | chr6:24223391-24223017 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 135-374 |
| Cow position: | chr6:388943-389194 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 135-493 |
| Cow position: | chr6:47327296-47326933 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 239 |
| Conread position: | 135-495 |
| Cow position: | chr6:42617660-42618023 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 135-500 |
| Cow position: | chr6:56376575-56376202 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 42 |
| Conread position: | 135-503 |
| Cow position: | chr6:2582647-2583009 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 135-503 |
| Cow position: | chr6:7824535-7824897 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 135-503 |
| Cow position: | chr6:9026289-9026669 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 246 |
| Conread position: | 135-503 |
| Cow position: | chr6:17534741-17534368 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 135-503 |
| Cow position: | chr6:37053787-37054134 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 135-503 |
| Cow position: | chr6:48573110-48572730 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 136-503 |
| Cow position: | chr6:7173991-7173603 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 52, 263 |
| Conread position: | 137-441 |
| Cow position: | chr6:22968848-22969165 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 23, 250 |
| Conread position: | 138-376 |
| Cow position: | chr6:17669084-17669315 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 138-503 |
| Cow position: | chr6:41264901-41265260 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 36 |
| Conread position: | 141-427 |
| Cow position: | chr6:38614602-38614888 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 47, 104 |
| Conread position: | 142-302 |
| Cow position: | chr6:9453889-9454047 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 142-487 |
| Cow position: | chr6:30474110-30474462 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 103, 36 |
| Conread position: | 142-500 |
| Cow position: | chr6:45065227-45064870 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 142-503 |
| Cow position: | chr6:6995165-6994809 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 142-503 |
| Cow position: | chr6:64436551-64436182 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 221 |
| Conread position: | 143-441 |
| Cow position: | chr6:1907319-1907628 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 208 |
| Conread position: | 143-500 |
| Cow position: | chr6:35435783-35436141 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 144-474 |
| Cow position: | chr6:35415740-35415395 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 144-495 |
| Cow position: | chr6:38018055-38018403 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 145-500 |
| Cow position: | chr6:21737102-21736746 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 145-502 |
| Cow position: | chr6:31425781-31425409 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 163 |
| Conread position: | 146-485 |
| Cow position: | chr6:33984748-33985104 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 247 |
| Conread position: | 148-317 |
| Cow position: | chr6:55366538-55366357 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 150-503 |
| Cow position: | chr6:827919-827558 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 233 |
| Conread position: | 152-491 |
| Cow position: | chr6:23532452-23532792 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 162 |
| Conread position: | 160-503 |
| Cow position: | chr6:15782728-15782365 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 166-503 |
| Cow position: | chr6:32276733-32277095 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 22, 196 |
| Conread position: | 168-317 |
| Cow position: | chr6:10705966-10705809 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 168-490 |
| Cow position: | chr6:2366303-2365976 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 168-491 |
| Cow position: | chr6:3545509-3545817 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 168-495 |
| Cow position: | chr6:12652011-12652344 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 20, 168 |
| Conread position: | 168-495 |
| Cow position: | chr6:39158154-39157833 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 168-503 |
| Cow position: | chr6:6367856-6367522 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 168-503 |
| Cow position: | chr6:24545422-24545763 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 168-503 |
| Cow position: | chr6:50271289-50270962 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 126 |
| Conread position: | 168-503 |
| Cow position: | chr6:54144106-54144452 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 224 |
| Conread position: | 169-316 |
| Cow position: | chr6:16220221-16220065 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 169-491 |
| Cow position: | chr6:59069822-59069482 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 171-503 |
| Cow position: | chr6:65871705-65872038 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 17, 127 |
| Conread position: | 173-491 |
| Cow position: | chr6:8788227-8787899 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 174-497 |
| Cow position: | chr6:32412807-32412496 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 51, 126 |
| Conread position: | 175-480 |
| Cow position: | chr6:47799110-47799420 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 178-503 |
| Cow position: | chr6:16620410-16620730 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 185-447 |
| Cow position: | chr6:32677257-32676989 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 187-474 |
| Cow position: | chr6:65947263-65946960 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 57, 201 |
| Conread position: | 192-491 |
| Cow position: | chr6:5114217-5113915 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 165 |
| Conread position: | 193-502 |
| Cow position: | chr6:37739017-37739323 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 176 |
| Conread position: | 200-478 |
| Cow position: | chr6:12543095-12542805 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 200-502 |
| Cow position: | chr6:50318218-50317896 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 181 |
| Conread position: | 203-479 |
| Cow position: | chr6:47204314-47204601 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 181 |
| Conread position: | 207-503 |
| Cow position: | chr6:36194432-36194745 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 213-503 |
| Cow position: | chr6:37611973-37612255 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 216-472 |
| Cow position: | chr6:55892616-55892886 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 216-491 |
| Cow position: | chr6:582413-582135 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 217-503 |
| Cow position: | chr6:50034860-50034580 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 225-503 |
| Cow position: | chr6:30160186-30160468 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 226-500 |
| Cow position: | chr6:51840134-51840425 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 231-495 |
| Cow position: | chr6:53673732-53674005 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 233-503 |
| Cow position: | chr6:38453911-38453632 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 226 |
| Conread position: | 250-491 |
| Cow position: | chr6:20196401-20196165 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 254-503 |
| Cow position: | chr6:61218134-61217881 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 260-503 |
| Cow position: | chr6:4164268-4164024 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 260-503 |
| Cow position: | chr6:15025984-15025743 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 5 |
| Conread position: | 266-503 |
| Cow position: | chr6:16733323-16733564 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 269-494 |
| Cow position: | chr6:35775072-35774843 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 269-501 |
| Cow position: | chr6:56860461-56860697 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 271-501 |
| Cow position: | chr6:59588493-59588261 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 204 |
| Conread position: | 273-477 |
| Cow position: | chr6:3078432-3078633 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 274-503 |
| Cow position: | chr6:15997296-15997068 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 275-502 |
| Cow position: | chr6:38914362-38914589 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 279-503 |
| Cow position: | chr6:24557803-24558028 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 54, 160 |
| Conread position: | 280-500 |
| Cow position: | chr6:33929626-33929400 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 282-503 |
| Cow position: | chr6:40737076-40736855 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 285-495 |
| Cow position: | chr6:54479225-54479009 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 287-479 |
| Cow position: | chr6:59633063-59633262 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 288-489 |
| Cow position: | chr6:40722-40515 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 290-477 |
| Cow position: | chr6:41679018-41679213 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 293-503 |
| Cow position: | chr6:54062604-54062810 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 170, 14 |
| Conread position: | 299-498 |
| Cow position: | chr6:38895166-38894968 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 300-495 |
| Cow position: | chr6:7835858-7836056 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 308-489 |
| Cow position: | chr6:7253176-7253005 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 324-503 |
| Cow position: | chr6:51294255-51294435 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 337-478 |
| Cow position: | chr6:43760350-43760486 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 337-484 |
| Cow position: | chr6:35069130-35068988 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 337-502 |
| Cow position: | chr6:47858270-47858432 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 337-503 |
| Cow position: | chr6:13718744-13718913 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 337-503 |
| Cow position: | chr6:32798891-32798723 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 342-491 |
| Cow position: | chr6:50760787-50760937 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 352-503 |
| Cow position: | chr6:64427217-64427374 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 362-503 |
| Cow position: | chr6:18469220-18469083 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 365-502 |
| Cow position: | chr6:16220051-16219917 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 368-503 |
| Cow position: | chr6:52604769-52604633 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 369-503 |
| Cow position: | chr6:59496230-59496368 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 378-503 |
| Cow position: | chr6:28795357-28795488 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 392-495 |
| Cow position: | chr6:1890543-1890440 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-501 |
| Cow position: | chr6:10237373-10237481 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.