Cow genome map

Conread name: rpfco0133_f4.y1

Conread position: 1-360
Cow position:
Alignm length: 360
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-361
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 1-362
Cow position:
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-362
Cow position:
Alignm length: 368
Alignm identity: 254
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 66, 59

Conread position: 2-310
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-355
Cow position:
Alignm length: 357
Alignm identity: 239
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 140, 147

Conread position: 2-356
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 159, 152

Conread position: 2-357
Cow position:
Alignm length: 357
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 333, 328

Conread position: 2-358
Cow position:
Alignm length: 361
Alignm identity: 228
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 163, 103

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-361
Cow position:
Alignm length: 363
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 141

Conread position: 2-361
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 162

Conread position: 2-361
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 287, 0

Conread position: 2-362
Cow position:
Alignm length: 367
Alignm identity: 227
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 44

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 68

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 230
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 180, 186

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 68

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 230
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 334, 320

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 71

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 56

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 226

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 61

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 156

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 233

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 144

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 160

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 72

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 320

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 165

Conread position: 2-362
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 197

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 146

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 164, 146

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 158

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 145

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 146

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 241
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 323, 310

Conread position: 3-362
Cow position:
Alignm length: 360
Alignm identity: 228
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 364
Alignm identity: 228
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 55

Conread position: 3-362
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 63

Conread position: 4-275
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 66

Conread position: 4-287
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 138, 120

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 79, 55

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 58

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 142

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 73

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 144

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 232

Conread position: 4-362
Cow position:
Alignm length: 361
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 143

Conread position: 5-272
Cow position:
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 163, 150

Conread position: 5-362
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 141

Conread position: 6-360
Cow position:
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 152

Conread position: 6-362
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 245

Conread position: 6-362
Cow position:
Alignm length: 358
Alignm identity: 226
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 72, 64

Conread position: 6-362
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 71

Conread position: 6-362
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 157

Conread position: 7-362
Cow position:
Alignm length: 358
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 155, 141

Conread position: 7-362
Cow position:
Alignm length: 357
Alignm identity: 235
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 326, 305

Conread position: 7-362
Cow position:
Alignm length: 362
Alignm identity: 235
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 54

Conread position: 7-362
Cow position:
Alignm length: 357
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 326, 305

Conread position: 7-362
Cow position:
Alignm length: 358
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 161, 149

Conread position: 8-362
Cow position:
Alignm length: 357
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 53

Conread position: 10-228
Cow position:
Alignm length: 220
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 130

Conread position: 10-297
Cow position:
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 273

Conread position: 10-313
Cow position:
Alignm length: 304
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-356
Cow position:
Alignm length: 348
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 64

Conread position: 10-358
Cow position:
Alignm length: 350
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 148

Conread position: 10-359
Cow position:
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 234

Conread position: 10-359
Cow position:
Alignm length: 353
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 64

Conread position: 10-359
Cow position:
Alignm length: 351
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 148, 137

Conread position: 10-360
Cow position:
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 58

Conread position: 10-361
Cow position:
Alignm length: 353
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 148, 130

Conread position: 10-362
Cow position:
Alignm length: 354
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 151, 138

Conread position: 10-362
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 243

Conread position: 10-362
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 243

Conread position: 10-362
Cow position:
Alignm length: 353
Alignm identity: 232
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 10-362
Cow position:
Alignm length: 355
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 148

Conread position: 10-362
Cow position:
Alignm length: 356
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 154, 141

Conread position: 12-362
Cow position:
Alignm length: 352
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 195, 187

Conread position: 17-362
Cow position:
Alignm length: 349
Alignm identity: 215
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 141, 18

Conread position: 19-362
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-362
Cow position:
Alignm length: 345
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 231, 226

Conread position: 54-357
Cow position:
Alignm length: 305
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 180, 176

Conread position: 72-362
Cow position:
Alignm length: 295
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 61

Conread position: 72-362
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-362
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 167, 158

Conread position: 81-362
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 58

Conread position: 98-358
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 54

Conread position: 164-358
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 82

Conread position: 184-362
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 53

Show alignments to all cow chromosomes.