Cow genome map


           Conread name:
           rpfco0133_f4.y1
        

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               316, 26
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 310
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-360
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 197
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               356, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 248
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 328
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 63
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 165
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 328
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 167
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 75
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 58
               

               Conread position:
               4-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 140
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 74
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               159, 163
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               158, 163
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               139, 148
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               222, 233
               

               Conread position:
               5-360
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               156, 162
               

               Conread position:
               6-362
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 240
               

               Conread position:
               6-362
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 253
               

               Conread position:
               8-362
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               9-362
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-362
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-362
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 68
               

               Conread position:
               10-362
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 148
               

               Conread position:
               14-361
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-362
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-343
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               83-362
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-362
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 11
               
Show alignments to all cow chromosomes.