Cow genome map
Conread name: | rpfco0133_f4.y1 |
Conread position: | 1-361 |
Cow position: | chr17:22473237-22473594 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 240 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 316, 26 |
Conread position: | 2-286 |
Cow position: | chr17:22498822-22498538 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 195 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-287 |
Cow position: | chr17:22551775-22551490 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 195 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-350 |
Cow position: | chr17:22499242-22498894 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-359 |
Cow position: | chr17:22473319-22473676 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 310 |
Conread position: | 2-359 |
Cow position: | chr17:22499158-22498801 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-360 |
Cow position: | chr17:22551859-22551501 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 197 |
Conread position: | 2-362 |
Cow position: | chr17:22452144-22451783 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 235 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 356, 0 |
Conread position: | 2-362 |
Cow position: | chr17:22452228-22451868 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 248 |
Conread position: | 2-362 |
Cow position: | chr17:22452312-22451952 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 332, 328 |
Conread position: | 2-362 |
Cow position: | chr17:22473571-22473932 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 63 |
Conread position: | 2-362 |
Cow position: | chr17:22499074-22498714 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 236 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 66, 59 |
Conread position: | 2-362 |
Cow position: | chr17:22499326-22498966 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr17:22551943-22551583 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr17:22552027-22551667 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr17:22552111-22551751 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 165 |
Conread position: | 2-362 |
Cow position: | chr17:22552195-22551835 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 81 |
Conread position: | 2-362 |
Cow position: | chr17:22552279-22551919 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr17:22552447-22552087 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 81 |
Conread position: | 2-362 |
Cow position: | chr17:22552867-22552507 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 81 |
Conread position: | 2-362 |
Cow position: | chr17:22553035-22552675 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 333, 328 |
Conread position: | 2-362 |
Cow position: | chr17:22589949-22589589 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 167 |
Conread position: | 3-362 |
Cow position: | chr17:22473488-22473847 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 62 |
Conread position: | 3-362 |
Cow position: | chr17:22552782-22552423 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 75 |
Conread position: | 3-362 |
Cow position: | chr17:22589612-22589253 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 228 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 62, 58 |
Conread position: | 4-357 |
Cow position: | chr17:22452058-22451705 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 78 |
Conread position: | 4-362 |
Cow position: | chr17:22473405-22473763 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 140 |
Conread position: | 4-362 |
Cow position: | chr17:22552697-22552339 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 74 |
Conread position: | 4-362 |
Cow position: | chr17:22553117-22552759 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 235 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 159, 163 |
Conread position: | 4-362 |
Cow position: | chr17:22589779-22589421 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 237 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 158, 163 |
Conread position: | 4-362 |
Cow position: | chr17:22590115-22589757 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 241 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 139, 148 |
Conread position: | 4-362 |
Cow position: | chr17:22590199-22589841 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-362 |
Cow position: | chr17:22590283-22589925 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 235 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 222, 233 |
Conread position: | 5-360 |
Cow position: | chr17:22589526-22589173 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 231 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 156, 162 |
Conread position: | 6-362 |
Cow position: | chr17:22552527-22552171 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 240 |
Conread position: | 6-362 |
Cow position: | chr17:22590029-22589673 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 253 |
Conread position: | 8-362 |
Cow position: | chr17:22473163-22473511 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 236 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 13, 7 |
Conread position: | 9-362 |
Cow position: | chr17:22452389-22452036 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-362 |
Cow position: | chr17:22498982-22498630 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-362 |
Cow position: | chr17:22552355-22552003 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 68 |
Conread position: | 10-362 |
Cow position: | chr17:22552607-22552255 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 148 |
Conread position: | 14-361 |
Cow position: | chr17:22499398-22499051 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 67-362 |
Cow position: | chr17:22590304-22590009 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 201 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 81-343 |
Cow position: | chr17:22452401-22452139 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 83-362 |
Cow position: | chr17:22553122-22552843 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 176 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 163-362 |
Cow position: | chr17:22499417-22499218 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 139 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 11 |
Show alignments to all cow chromosomes.