Cow genome map
| Conread name: | rpfco0133_f4.y1 |
| Conread position: | 1-348 |
| Cow position: | chr19:14940729-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 245 |
| Conread position: | 2-314 |
| Cow position: | chr19:14916117-14916424 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 2-339 |
| Cow position: | chr19:14948313-14947978 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 156, 145 |
| Conread position: | 2-347 |
| Cow position: | chr19:14948397-14948052 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 156 |
| Conread position: | 2-350 |
| Cow position: | chr19:43569986-43569642 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 254, 0 |
| Conread position: | 2-353 |
| Cow position: | chr19:14959172-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 325, 51 |
| Conread position: | 2-358 |
| Cow position: | chr19:23614594-23614950 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 151 |
| Conread position: | 2-359 |
| Cow position: | chr19:23649540-23649897 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-359 |
| Cow position: | chr19:23649624-23649981 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-359 |
| Cow position: | chr19:43570312-43569965 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-360 |
| Cow position: | chr19:23614762-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 2-361 |
| Cow position: | chr19:14959665-14959308 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 2-361 |
| Cow position: | chr19:14960071-14959714 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 165 |
| Conread position: | 2-362 |
| Cow position: | chr19:14916033-14916389 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 2-362 |
| Cow position: | chr19:14940310-14940670 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 314 |
| Conread position: | 2-362 |
| Cow position: | chr19:14940394-14940754 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 145 |
| Conread position: | 2-362 |
| Cow position: | chr19:14940478-14940838 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 161 |
| Conread position: | 2-362 |
| Cow position: | chr19:14948480-14948121 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:14960321-14959963 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23597018-23597375 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23597099-23597459 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23597351-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 146 |
| Conread position: | 2-362 |
| Cow position: | chr19:23613586-23613946 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23613670-23614030 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23613922-23614282 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23614090-23614450 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 310 |
| Conread position: | 2-362 |
| Cow position: | chr19:23614258-23614618 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23614342-23614702 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 304 |
| Conread position: | 2-362 |
| Cow position: | chr19:23614426-23614786 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 314 |
| Conread position: | 2-362 |
| Cow position: | chr19:23614510-23614870 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 164 |
| Conread position: | 2-362 |
| Cow position: | chr19:23649456-23649816 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 140, 153 |
| Conread position: | 2-362 |
| Cow position: | chr19:23649708-23650068 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 146 |
| Conread position: | 2-362 |
| Cow position: | chr19:23649792-23650152 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr19:23649876-23650236 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 2-362 |
| Cow position: | chr19:23649960-23650320 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 153 |
| Conread position: | 2-362 |
| Cow position: | chr19:43570238-43569879 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 3-352 |
| Cow position: | chr19:14940059-14940408 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 3-359 |
| Cow position: | chr19:20635394-20635038 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 139, 145 |
| Conread position: | 3-362 |
| Cow position: | chr19:14940143-14940502 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr19:14960154-14959797 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 237 |
| Conread position: | 3-362 |
| Cow position: | chr19:20635646-20635287 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 313, 322 |
| Conread position: | 3-362 |
| Cow position: | chr19:20677518-20677877 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 3-362 |
| Cow position: | chr19:20678022-20678381 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 145 |
| Conread position: | 3-362 |
| Cow position: | chr19:20678106-20678465 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 3-362 |
| Cow position: | chr19:20678190-20678549 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr19:20678442-20678798 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 146 |
| Conread position: | 3-362 |
| Cow position: | chr19:23649289-23649648 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 4-270 |
| Cow position: | chr19:14959092-14958826 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 138, 148 |
| Conread position: | 4-276 |
| Cow position: | chr19:23650214-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-280 |
| Cow position: | chr19:23597437-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 246, 242 |
| Conread position: | 4-309 |
| Cow position: | chr19:20678359-20678664 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 4-353 |
| Cow position: | chr19:20677855-20678204 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 168, 150 |
| Conread position: | 4-360 |
| Cow position: | chr19:14959254-14958904 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 4-362 |
| Cow position: | chr19:14940228-14940586 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr19:14940564-14940922 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 4-362 |
| Cow position: | chr19:14940648-14941006 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr19:14959413-14959070 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 4-362 |
| Cow position: | chr19:20635477-20635119 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr19:20677687-20678045 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 4-362 |
| Cow position: | chr19:20677771-20678129 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 74 |
| Conread position: | 4-362 |
| Cow position: | chr19:20678275-20678633 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 4-362 |
| Cow position: | chr19:23597269-23597627 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 234 |
| Conread position: | 4-362 |
| Cow position: | chr19:23614008-23614366 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr19:23650046-23650404 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 143 |
| Conread position: | 4-362 |
| Cow position: | chr19:43570152-43569794 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr19:43570394-43570046 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 6-362 |
| Cow position: | chr19:23613506-23613862 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 6-362 |
| Cow position: | chr19:23613758-23614114 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 89 |
| Conread position: | 7-362 |
| Cow position: | chr19:20677606-20677961 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 140 |
| Conread position: | 7-362 |
| Cow position: | chr19:23597188-23597543 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 315 |
| Conread position: | 9-362 |
| Cow position: | chr19:20635304-20634954 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 9-362 |
| Cow position: | chr19:20677440-20677793 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 10-360 |
| Cow position: | chr19:20635555-20635205 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 303 |
| Conread position: | 10-362 |
| Cow position: | chr19:23613846-23614198 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 10-362 |
| Cow position: | chr19:23614686-23615038 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 303 |
| Conread position: | 13-362 |
| Cow position: | chr19:20677360-20677709 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 146 |
| Conread position: | 16-362 |
| Cow position: | chr19:14939988-14940334 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-362 |
| Cow position: | chr19:23613351-23613694 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 117 |
| Conread position: | 40-362 |
| Cow position: | chr19:14959711-14959391 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 80-362 |
| Cow position: | chr19:14959262-14958986 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 166-362 |
| Cow position: | chr19:14960409-14960213 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.