Cow genome map

Conread name: rpfco0133_f4.y1

Conread position: 1-348
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 245

Conread position: 2-314
Cow position:
Alignm length: 315
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 12

Conread position: 2-339
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 156, 145

Conread position: 2-347
Cow position:
Alignm length: 347
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 156

Conread position: 2-350
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 254, 0

Conread position: 2-353
Cow position:
Alignm length: 354
Alignm identity: 238
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 325, 51

Conread position: 2-358
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 151

Conread position: 2-359
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-359
Cow position:
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-359
Cow position:
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-360
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 2-361
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 2-361
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 165

Conread position: 2-362
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 61

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 314

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 145

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 161

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 146

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 310

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 304

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 314

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 164

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 140, 153

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 146

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 72

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 153

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 56

Conread position: 3-352
Cow position:
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 3-359
Cow position:
Alignm length: 359
Alignm identity: 233
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 139, 145

Conread position: 3-362
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 237

Conread position: 3-362
Cow position:
Alignm length: 361
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 313, 322

Conread position: 3-362
Cow position:
Alignm length: 362
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 67

Conread position: 3-362
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 145

Conread position: 3-362
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 67

Conread position: 3-362
Cow position:
Alignm length: 360
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 362
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 146

Conread position: 3-362
Cow position:
Alignm length: 362
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 55

Conread position: 4-270
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 138, 148

Conread position: 4-276
Cow position:
Alignm length: 273
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-280
Cow position:
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 246, 242

Conread position: 4-309
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 88

Conread position: 4-353
Cow position:
Alignm length: 351
Alignm identity: 230
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 168, 150

Conread position: 4-360
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 135, 0

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 69

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 362
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 57

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 362
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 70

Conread position: 4-362
Cow position:
Alignm length: 362
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 74

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 234

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 143

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 6-362
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 147

Conread position: 6-362
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 89

Conread position: 7-362
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 140

Conread position: 7-362
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 315

Conread position: 9-362
Cow position:
Alignm length: 356
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 57

Conread position: 9-362
Cow position:
Alignm length: 357
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 45

Conread position: 10-360
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 303

Conread position: 10-362
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 61

Conread position: 10-362
Cow position:
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 303

Conread position: 13-362
Cow position:
Alignm length: 352
Alignm identity: 216
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 146

Conread position: 16-362
Cow position:
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-362
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 117

Conread position: 40-362
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 22, 32

Conread position: 80-362
Cow position:
Alignm length: 283
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 166-362
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.