Cow genome map

Conread name: rpfco0133_f4.y1

Conread position: 1-188
Cow position:
Alignm length: 189
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 62

Conread position: 1-358
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 74

Conread position: 1-359
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 57

Conread position: 1-359
Cow position:
Alignm length: 365
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 69

Conread position: 1-360
Cow position:
Alignm length: 362
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 66

Conread position: 1-360
Cow position:
Alignm length: 361
Alignm identity: 236
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 348, 0

Conread position: 1-362
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 137

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-279
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 78, 70

Conread position: 2-279
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 79, 70

Conread position: 2-280
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-280
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-302
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 84

Conread position: 2-308
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 159, 145

Conread position: 2-309
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 161, 154

Conread position: 2-355
Cow position:
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 148, 140

Conread position: 2-356
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 225

Conread position: 2-356
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-359
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 81

Conread position: 2-359
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 68

Conread position: 2-359
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-359
Cow position:
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-359
Cow position:
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-360
Cow position:
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 72

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 58

Conread position: 2-362
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 71

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 146

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 67

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 48

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 235

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 319

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 378
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 146

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 159, 145

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 245, 229

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 145, 156

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 67

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 156

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 323

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 145

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 156

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 230

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 90

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 90

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 230

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 156

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 145

Conread position: 2-362
Cow position:
Alignm length: 366
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 72

Conread position: 3-276
Cow position:
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 139, 150

Conread position: 3-361
Cow position:
Alignm length: 364
Alignm identity: 235
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 85, 57

Conread position: 3-362
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 3-362
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 364
Alignm identity: 237
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 52

Conread position: 4-347
Cow position:
Alignm length: 345
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 158, 148

Conread position: 4-360
Cow position:
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 248, 235

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 225

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 135

Conread position: 5-311
Cow position:
Alignm length: 310
Alignm identity: 198
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 56

Conread position: 5-360
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 0

Conread position: 5-362
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-362
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 5-362
Cow position:
Alignm length: 362
Alignm identity: 235
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 78, 68

Conread position: 5-362
Cow position:
Alignm length: 360
Alignm identity: 228
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 240, 232

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 225
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 50

Conread position: 7-362
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 7-362
Cow position:
Alignm length: 360
Alignm identity: 230
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 53

Conread position: 7-362
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 63

Conread position: 8-362
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 140

Conread position: 8-362
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 140

Conread position: 10-359
Cow position:
Alignm length: 351
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 61

Conread position: 10-362
Cow position:
Alignm length: 357
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 64

Conread position: 12-362
Cow position:
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 315, 305

Conread position: 14-359
Cow position:
Alignm length: 347
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 318, 305

Conread position: 19-362
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 22-356
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 136

Conread position: 24-362
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-359
Cow position:
Alignm length: 336
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 111

Conread position: 27-359
Cow position:
Alignm length: 338
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 111

Conread position: 28-362
Cow position:
Alignm length: 336
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 306, 302

Conread position: 61-360
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 250, 256

Conread position: 72-362
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 72-362
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 80-320
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 78

Conread position: 81-362
Cow position:
Alignm length: 282
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 81-362
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 168, 160

Conread position: 83-359
Cow position:
Alignm length: 279
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 167, 153

Conread position: 83-360
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 83-362
Cow position:
Alignm length: 282
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 167, 154

Conread position: 106-362
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 55, 42

Conread position: 157-362
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 94, 88

Conread position: 167-362
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 167-362
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.