Cow genome map

Conread name: rpfco0133_f4.y1

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-223
Cow position:
Alignm length: 223
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-142
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-196
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 137

Conread position: 2-263
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 141, 156

Conread position: 2-277
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 80, 68

Conread position: 2-281
Cow position:
Alignm length: 282
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 125

Conread position: 2-289
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-314
Cow position:
Alignm length: 317
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 119, 247

Conread position: 2-337
Cow position:
Alignm length: 337
Alignm identity: 210
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 159, 143

Conread position: 2-349
Cow position:
Alignm length: 348
Alignm identity: 223
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-353
Cow position:
Alignm length: 352
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 0

Conread position: 2-357
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 310

Conread position: 2-357
Cow position:
Alignm length: 359
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 90

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-360
Cow position:
Alignm length: 360
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 165, 146

Conread position: 2-360
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 238

Conread position: 2-361
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 162

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 156

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 145

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 230
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 57

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 60

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 140, 144

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 244
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 71

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 238
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 229, 235

Conread position: 2-362
Cow position:
Alignm length: 364
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 294, 17

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 148, 13

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 152, 156

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 231
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 161, 165

Conread position: 3-343
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 155

Conread position: 4-263
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 138, 149

Conread position: 4-264
Cow position:
Alignm length: 262
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 58

Conread position: 4-349
Cow position:
Alignm length: 347
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 158, 163

Conread position: 4-358
Cow position:
Alignm length: 355
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-360
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 65

Conread position: 4-360
Cow position:
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 85, 90

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 10

Conread position: 4-362
Cow position:
Alignm length: 361
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 58

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-349
Cow position:
Alignm length: 349
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 65

Conread position: 6-362
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-362
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 139

Conread position: 8-362
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-362
Cow position:
Alignm length: 358
Alignm identity: 234
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 74, 65

Conread position: 10-362
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 314

Conread position: 12-359
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 222, 218

Conread position: 12-362
Cow position:
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-343
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 151, 138

Conread position: 16-362
Cow position:
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-347
Cow position:
Alignm length: 330
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 231, 226

Conread position: 19-348
Cow position:
Alignm length: 332
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 114, 132

Conread position: 19-362
Cow position:
Alignm length: 346
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 79

Conread position: 19-362
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 123, 127

Conread position: 21-362
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 58

Conread position: 21-362
Cow position:
Alignm length: 344
Alignm identity: 226
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 37, 58

Conread position: 22-350
Cow position:
Alignm length: 329
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-362
Cow position:
Alignm length: 341
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 140

Conread position: 40-362
Cow position:
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 273

Conread position: 67-307
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 100

Conread position: 67-362
Cow position:
Alignm length: 297
Alignm identity: 182
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 183, 163

Conread position: 77-359
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 22

Conread position: 80-362
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 10

Conread position: 81-361
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 73

Conread position: 81-362
Cow position:
Alignm length: 284
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 64

Conread position: 92-358
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 56

Conread position: 103-362
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 56, 43

Conread position: 103-362
Cow position:
Alignm length: 261
Alignm identity: 170
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 132

Conread position: 123-362
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 158-360
Cow position:
Alignm length: 203
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 163-361
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 166-362
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 72

Conread position: 166-362
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 181-362
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 233-361
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.