Cow genome map


           Conread name:
           rpfco0133_f4.y1
        

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 0
               

               Conread position:
               2-274
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               254, 0
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-356
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 157
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 154
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 52
               

               Conread position:
               3-181
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 156
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 219
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 155
               

               Conread position:
               4-349
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-359
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               4-360
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 311
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               120, 244
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-360
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-360
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               10-362
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               21-362
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               21-362
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               40-361
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               270, 82
               

               Conread position:
               41-362
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               92-352
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               106-362
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               97, 92
               

               Conread position:
               166-362
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.