Cow genome map
| Conread name: | rpfco0133_f4.y1 |
| Conread position: | 1-343 |
| Cow position: | chr3:77350930-77350591 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 1-361 |
| Cow position: | chr3:68027410-68027766 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 0 |
| Conread position: | 2-274 |
| Cow position: | chr3:68046088-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 254, 0 |
| Conread position: | 2-314 |
| Cow position: | chr3:62743159-62743471 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-356 |
| Cow position: | chr3:68027159-68027513 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-359 |
| Cow position: | chr3:62743080-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-362 |
| Cow position: | chr3:62722006-62721646 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr3:62722090-62721730 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 157 |
| Conread position: | 2-362 |
| Cow position: | chr3:62742346-62742702 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 2-362 |
| Cow position: | chr3:62742929-62743267 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-362 |
| Cow position: | chr3:68045752-68046112 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 154 |
| Conread position: | 2-362 |
| Cow position: | chr3:77351090-77350737 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 52 |
| Conread position: | 3-181 |
| Cow position: | chr3:16020395-16020217 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr3:62722257-62721898 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr3:68027076-68027435 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 156 |
| Conread position: | 3-362 |
| Cow position: | chr3:68027328-68027687 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr3:68045669-68046028 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 219 |
| Conread position: | 3-362 |
| Cow position: | chr3:68045921-68046280 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 155 |
| Conread position: | 4-349 |
| Cow position: | chr3:68046006-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-359 |
| Cow position: | chr3:62742515-62742865 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 4-360 |
| Cow position: | chr3:68045838-68046194 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 61, 76 |
| Conread position: | 4-362 |
| Cow position: | chr3:62722172-62721814 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 311 |
| Conread position: | 4-362 |
| Cow position: | chr3:62742762-62743104 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 120, 244 |
| Conread position: | 4-362 |
| Cow position: | chr3:68027245-68027603 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-360 |
| Cow position: | chr3:62721919-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-360 |
| Cow position: | chr3:62742269-62742619 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 10-362 |
| Cow position: | chr3:62742605-62742953 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 21-362 |
| Cow position: | chr3:62722323-62721982 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 21-362 |
| Cow position: | chr3:68027010-68027351 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-361 |
| Cow position: | chr3:62743034-62743350 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 270, 82 |
| Conread position: | 41-362 |
| Cow position: | chr3:77351302-77350983 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 92-352 |
| Cow position: | chr3:16020467-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 106-362 |
| Cow position: | chr3:68045604-68045860 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 97, 92 |
| Conread position: | 166-362 |
| Cow position: | chr3:68045580-68045776 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.