Cow genome map

Conread name: rpfco0133_f4.y1

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 57

Conread position: 1-270
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 70

Conread position: 1-309
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 57

Conread position: 1-312
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 71, 57

Conread position: 1-312
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 57

Conread position: 1-351
Cow position:
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 57

Conread position: 1-359
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 71

Conread position: 1-360
Cow position:
Alignm length: 365
Alignm identity: 233
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 78, 21

Conread position: 1-361
Cow position:
Alignm length: 364
Alignm identity: 236
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 57

Conread position: 1-362
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 156

Conread position: 1-362
Cow position:
Alignm length: 367
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 70

Conread position: 1-362
Cow position:
Alignm length: 366
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 57

Conread position: 1-362
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 72

Conread position: 1-362
Cow position:
Alignm length: 365
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 309, 292

Conread position: 1-362
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 70

Conread position: 1-362
Cow position:
Alignm length: 364
Alignm identity: 229
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 81, 70

Conread position: 1-362
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 81, 63

Conread position: 1-362
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 74, 57

Conread position: 1-362
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 57

Conread position: 1-362
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 73

Conread position: 1-362
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 81, 70

Conread position: 1-362
Cow position:
Alignm length: 364
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 74

Conread position: 1-362
Cow position:
Alignm length: 363
Alignm identity: 237
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 230, 238

Conread position: 2-142
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-276
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 224, 193

Conread position: 2-308
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 141, 156

Conread position: 2-309
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 160, 13

Conread position: 2-349
Cow position:
Alignm length: 354
Alignm identity: 236
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 232, 134

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 156

Conread position: 2-362
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 165

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 148

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 165

Conread position: 2-362
Cow position:
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 136

Conread position: 2-362
Cow position:
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 62

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-362
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-263
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 57

Conread position: 3-362
Cow position:
Alignm length: 360
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 96

Conread position: 3-362
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-362
Cow position:
Alignm length: 364
Alignm identity: 227
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 48

Conread position: 3-362
Cow position:
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 4-308
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 283, 0

Conread position: 4-312
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 47

Conread position: 4-355
Cow position:
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 295

Conread position: 4-361
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 89

Conread position: 4-362
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 149, 163

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 302

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 219

Conread position: 4-362
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 145

Conread position: 4-362
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 81, 50

Conread position: 4-362
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 78, 64

Conread position: 4-362
Cow position:
Alignm length: 363
Alignm identity: 227
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 64

Conread position: 4-362
Cow position:
Alignm length: 362
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 56

Conread position: 4-362
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 65

Conread position: 4-362
Cow position:
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 163

Conread position: 5-310
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 77, 59

Conread position: 5-362
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 77

Conread position: 6-362
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 55

Conread position: 6-362
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 68

Conread position: 8-362
Cow position:
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-287
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 48

Conread position: 10-347
Cow position:
Alignm length: 339
Alignm identity: 204
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 52

Conread position: 10-361
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 50

Conread position: 10-362
Cow position:
Alignm length: 356
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 240, 223

Conread position: 11-286
Cow position:
Alignm length: 280
Alignm identity: 180
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 71, 49

Conread position: 12-362
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 46

Conread position: 16-309
Cow position:
Alignm length: 295
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 46

Conread position: 19-362
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 124, 147

Conread position: 20-362
Cow position:
Alignm length: 343
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 21-312
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 37

Conread position: 54-360
Cow position:
Alignm length: 307
Alignm identity: 198
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 54-362
Cow position:
Alignm length: 310
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 40

Conread position: 55-362
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 48

Conread position: 56-362
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 102

Conread position: 73-361
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 82-314
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 99-308
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 54

Conread position: 105-362
Cow position:
Alignm length: 259
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 226, 212

Show alignments to all cow chromosomes.