Cow genome map
Conread name: | rpfco0133_f4.y1 |
Conread position: | 1-229 |
Cow position: | chr7:11434505-11434277 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 73, 57 |
Conread position: | 1-270 |
Cow position: | chr7:8325891-8326163 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 198 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 78, 70 |
Conread position: | 1-309 |
Cow position: | chr7:8243285-8243592 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 210 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 87, 57 |
Conread position: | 1-312 |
Cow position: | chr7:8243452-8243763 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 206 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 71, 57 |
Conread position: | 1-312 |
Cow position: | chr7:8243788-8244096 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 216 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 83, 57 |
Conread position: | 1-351 |
Cow position: | chr7:8325807-8326160 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 57 |
Conread position: | 1-359 |
Cow position: | chr7:11601205-11600847 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 242 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 59, 71 |
Conread position: | 1-360 |
Cow position: | chr7:1439619-1439979 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 233 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 78, 21 |
Conread position: | 1-361 |
Cow position: | chr7:11434904-11434558 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 236 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 72, 57 |
Conread position: | 1-362 |
Cow position: | chr7:1014837-1015198 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 156 |
Conread position: | 1-362 |
Cow position: | chr7:8242865-8243226 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 233 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 82, 70 |
Conread position: | 1-362 |
Cow position: | chr7:8242949-8243310 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 230 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 75, 57 |
Conread position: | 1-362 |
Cow position: | chr7:8243620-8243981 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 244 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 57, 72 |
Conread position: | 1-362 |
Cow position: | chr7:8243704-8244063 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 233 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 309, 292 |
Conread position: | 1-362 |
Cow position: | chr7:8277326-8277687 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 235 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 78, 70 |
Conread position: | 1-362 |
Cow position: | chr7:8277410-8277771 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 229 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 81, 70 |
Conread position: | 1-362 |
Cow position: | chr7:8277578-8277939 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 239 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 81, 63 |
Conread position: | 1-362 |
Cow position: | chr7:8324967-8325328 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 247 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 74, 57 |
Conread position: | 1-362 |
Cow position: | chr7:8325303-8325664 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 57 |
Conread position: | 1-362 |
Cow position: | chr7:8325555-8325916 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 239 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 81, 73 |
Conread position: | 1-362 |
Cow position: | chr7:8325639-8326000 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 249 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 81, 70 |
Conread position: | 1-362 |
Cow position: | chr7:18390060-18390421 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 74 |
Conread position: | 1-362 |
Cow position: | chr7:42879378-42879017 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 237 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 230, 238 |
Conread position: | 2-142 |
Cow position: | chr7:1440125-1440265 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-276 |
Cow position: | chr7:3180604-3180877 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 194 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 224, 193 |
Conread position: | 2-308 |
Cow position: | chr7:18390481-18390787 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 211 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 141, 156 |
Conread position: | 2-309 |
Cow position: | chr7:1439958-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 214 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 160, 13 |
Conread position: | 2-349 |
Cow position: | chr7:1439453-1439802 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 236 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 232, 134 |
Conread position: | 2-360 |
Cow position: | chr7:18390397-18390755 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 237 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-360 |
Cow position: | chr7:42878621-42878263 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:1014670-1015030 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 156 |
Conread position: | 2-362 |
Cow position: | chr7:1014754-1015114 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 165 |
Conread position: | 2-362 |
Cow position: | chr7:1015006-1015366 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:1015090-1015450 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:1438316-1438676 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 220 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:3179764-3180124 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:3179932-3180292 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 148 |
Conread position: | 2-362 |
Cow position: | chr7:3180016-3180376 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 165 |
Conread position: | 2-362 |
Cow position: | chr7:3180268-3180628 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 136 |
Conread position: | 2-362 |
Cow position: | chr7:11600868-11600508 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 62 |
Conread position: | 2-362 |
Cow position: | chr7:18390229-18390589 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:42878957-42878597 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-362 |
Cow position: | chr7:42879125-42878765 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-263 |
Cow position: | chr7:11600699-11600439 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 174 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 62, 57 |
Conread position: | 3-362 |
Cow position: | chr7:1014257-1014616 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-362 |
Cow position: | chr7:1439875-1440233 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 96 |
Conread position: | 3-362 |
Cow position: | chr7:3179849-3180208 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-362 |
Cow position: | chr7:8278336-8278687 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 227 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 48 |
Conread position: | 3-362 |
Cow position: | chr7:18390314-18390673 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 57 |
Conread position: | 4-308 |
Cow position: | chr7:1015176-1015482 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 209 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 283, 0 |
Conread position: | 4-312 |
Cow position: | chr7:8243204-8243511 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 206 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 70, 47 |
Conread position: | 4-355 |
Cow position: | chr7:11600782-11600430 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 295 |
Conread position: | 4-361 |
Cow position: | chr7:3180438-3180795 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 89 |
Conread position: | 4-362 |
Cow position: | chr7:1014426-1014778 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 239 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 149, 163 |
Conread position: | 4-362 |
Cow position: | chr7:3180102-3180460 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 302 |
Conread position: | 4-362 |
Cow position: | chr7:3180186-3180544 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 219 |
Conread position: | 4-362 |
Cow position: | chr7:3180354-3180712 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 145 |
Conread position: | 4-362 |
Cow position: | chr7:8277917-8278275 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 248 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 81, 50 |
Conread position: | 4-362 |
Cow position: | chr7:8278001-8278359 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 240 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 78, 64 |
Conread position: | 4-362 |
Cow position: | chr7:8278253-8278609 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 227 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 78, 64 |
Conread position: | 4-362 |
Cow position: | chr7:11601118-11600760 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 56 |
Conread position: | 4-362 |
Cow position: | chr7:18390147-18390505 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-362 |
Cow position: | chr7:42878787-42878429 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 65 |
Conread position: | 4-362 |
Cow position: | chr7:42878871-42878513 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 163 |
Conread position: | 5-310 |
Cow position: | chr7:8324887-8325192 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 215 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 77, 59 |
Conread position: | 5-362 |
Cow position: | chr7:42879206-42878849 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 77 |
Conread position: | 6-362 |
Cow position: | chr7:1014512-1014862 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 239 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 60, 55 |
Conread position: | 6-362 |
Cow position: | chr7:1014926-1015282 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 68 |
Conread position: | 8-362 |
Cow position: | chr7:42879287-42878933 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-287 |
Cow position: | chr7:8278091-8278368 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 192 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 64, 48 |
Conread position: | 10-347 |
Cow position: | chr7:1438240-1438577 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 204 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 30, 52 |
Conread position: | 10-361 |
Cow position: | chr7:8325732-8326083 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 253 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 65, 50 |
Conread position: | 10-362 |
Cow position: | chr7:8277671-8278023 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 231 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 240, 223 |
Conread position: | 11-286 |
Cow position: | chr7:11434824-11434549 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 180 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 71, 49 |
Conread position: | 12-362 |
Cow position: | chr7:8243379-8243729 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 239 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 62, 46 |
Conread position: | 16-309 |
Cow position: | chr7:1438414-1438707 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 185 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 33, 46 |
Conread position: | 19-362 |
Cow position: | chr7:8324817-8325160 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 235 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 124, 147 |
Conread position: | 20-362 |
Cow position: | chr7:18389995-18390337 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 219 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-312 |
Cow position: | chr7:8324735-8325026 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 197 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 58, 37 |
Conread position: | 54-360 |
Cow position: | chr7:1014224-1014530 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 198 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 54-362 |
Cow position: | chr7:1438200-1438508 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 189 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 40 |
Conread position: | 55-362 |
Cow position: | chr7:3179648-3179956 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 203 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 7, 48 |
Conread position: | 56-362 |
Cow position: | chr7:11601234-11600928 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 211 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 87, 102 |
Conread position: | 73-361 |
Cow position: | chr7:1014657-1014945 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 195 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 82-314 |
Cow position: | chr7:11434508-11434276 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 154 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 99-308 |
Cow position: | chr7:8277256-8277465 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 69, 54 |
Conread position: | 105-362 |
Cow position: | chr7:8324735-8324992 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 166 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 226, 212 |
Show alignments to all cow chromosomes.