Cow genome map
| Conread name: | rpfco0133_f4.y1 |
| Conread position: | 1-361 |
| Cow position: | chr8:46816195-46816555 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-362 |
| Cow position: | chr8:45201084-45201445 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 1-362 |
| Cow position: | chr8:46816699-46817060 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 166 |
| Conread position: | 1-362 |
| Cow position: | chr8:55580804-55581165 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 2-273 |
| Cow position: | chr8:46817120-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-298 |
| Cow position: | chr8:55581477-55581773 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 248, 236 |
| Conread position: | 2-303 |
| Cow position: | chr8:45201673-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-347 |
| Cow position: | chr8:48406555-48406201 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 249, 229 |
| Conread position: | 2-353 |
| Cow position: | chr8:55581309-55581660 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 311 |
| Conread position: | 2-359 |
| Cow position: | chr8:48407143-48406786 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:45201001-45201361 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:46815941-46816304 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:46816112-46816472 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 196 |
| Conread position: | 2-362 |
| Cow position: | chr8:46816280-46816640 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:46816364-46816724 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:46816532-46816892 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 165 |
| Conread position: | 2-362 |
| Cow position: | chr8:46816868-46817228 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 92 |
| Conread position: | 2-362 |
| Cow position: | chr8:48406891-48406531 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 173 |
| Conread position: | 2-362 |
| Cow position: | chr8:48407227-48406867 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 2-362 |
| Cow position: | chr8:48407311-48406951 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:48407395-48407035 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:48407479-48407119 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:55581141-55581501 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-362 |
| Cow position: | chr8:55581225-55581585 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 147 |
| Conread position: | 3-362 |
| Cow position: | chr8:45201338-45201697 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr8:55580890-55581249 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-345 |
| Cow position: | chr8:46817038-46817378 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 223 |
| Conread position: | 4-353 |
| Cow position: | chr8:45201591-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-359 |
| Cow position: | chr8:48406637-48406280 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 154 |
| Conread position: | 4-361 |
| Cow position: | chr8:46816618-46816975 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 163 |
| Conread position: | 4-362 |
| Cow position: | chr8:45201255-45201613 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr8:45201423-45201781 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr8:45201507-45201865 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-362 |
| Cow position: | chr8:55581059-55581417 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 312 |
| Conread position: | 5-362 |
| Cow position: | chr8:48406721-48406363 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 5-362 |
| Cow position: | chr8:55580976-55581333 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-294 |
| Cow position: | chr8:48407055-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 152, 141 |
| Conread position: | 6-313 |
| Cow position: | chr8:6958009-6957704 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 294, 226 |
| Conread position: | 6-362 |
| Cow position: | chr8:46816452-46816808 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-362 |
| Cow position: | chr8:46816788-46817144 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 161 |
| Conread position: | 9-362 |
| Cow position: | chr8:46815864-46816220 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 9-362 |
| Cow position: | chr8:46816035-46816388 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 158 |
| Conread position: | 9-362 |
| Cow position: | chr8:46816959-46817312 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 147 |
| Conread position: | 10-362 |
| Cow position: | chr8:48407555-48407203 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 136 |
| Conread position: | 19-362 |
| Cow position: | chr8:48407630-48407287 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 211 |
| Conread position: | 19-362 |
| Cow position: | chr8:55580737-55581081 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 97 |
| Conread position: | 21-362 |
| Cow position: | chr8:45200936-45201277 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-362 |
| Cow position: | chr8:45200787-45201109 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 115, 126 |
| Conread position: | 86-362 |
| Cow position: | chr8:48407647-48407371 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-352 |
| Cow position: | chr8:6958059-6957831 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-362 |
| Cow position: | chr8:6958059-6957905 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.