Cow genome map


           Conread name:
           rpfco0133_f4.y1
        

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 164
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               148, 136
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               148, 136
               

               Conread position:
               2-298
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 340
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 165
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 154
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 165
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 312
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 322
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 86
               

               Conread position:
               4-311
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               166, 58
               

               Conread position:
               4-349
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-360
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-360
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 226
               

               Conread position:
               4-361
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 154
               

               Conread position:
               6-361
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               154, 161
               

               Conread position:
               6-362
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               6-362
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-362
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 159
               

               Conread position:
               9-362
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               22-362
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               34-357
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               55-362
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               75-362
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-362
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 81
               

               Conread position:
               81-362
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               61, 71
               
Show alignments to all cow chromosomes.