Non-Coding RNA Search

Cow genome map


           Conread name:
           rpfco0138_h3.y1
        

               Conread position:
               168-359
               

               Cow position:
               chr6:62670144-62669945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               169-359
               

               Cow position:
               chr6:29851638-29851448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               170-359
               

               Cow position:
               chr6:8688580-8688767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               172-357
               

               Cow position:
               chr6:54127554-54127731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               174-359
               

               Cow position:
               chr6:35318871-35319054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 30
               

               Conread position:
               175-359
               

               Cow position:
               chr6:4469030-4468848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 22
               

               Conread position:
               176-337
               

               Cow position:
               chr6:60088206-60088375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 119
               

               Conread position:
               176-359
               

               Cow position:
               chr6:7189868-7190039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               176-359
               

               Cow position:
               chr6:26450562-26450392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               177-353
               

               Cow position:
               chr6:33450714-33450888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               177-353
               

               Cow position:
               chr6:53546290-53546121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               178-354
               

               Cow position:
               chr6:50771099-50771278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               179-354
               

               Cow position:
               chr6:7801139-7801312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               179-359
               

               Cow position:
               chr6:19264241-19264419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               180-301
               

               Cow position:
               chr6:12711532-12711653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-358
               

               Cow position:
               chr6:28559806-28559618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               180-359
               

               Cow position:
               chr6:55282032-55282214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               181-352
               

               Cow position:
               chr6:4048894-4049066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 26
               

               Conread position:
               181-359
               

               Cow position:
               chr6:41657524-41657347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               93, 100
               

               Conread position:
               181-359
               

               Cow position:
               chr6:67187936-67187764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               182-347
               

               Cow position:
               chr6:6850575-6850415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               182-347
               

               Cow position:
               chr6:67574648-67574479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               182-355
               

               Cow position:
               chr6:60273752-60273927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               182-357
               

               Cow position:
               chr6:15974262-15974442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               182-359
               

               Cow position:
               chr6:7291569-7291395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               182-359
               

               Cow position:
               chr6:10225393-10225576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               182-359
               

               Cow position:
               chr6:12965110-12964932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               182-359
               

               Cow position:
               chr6:33302652-33302474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               182-359
               

               Cow position:
               chr6:50577772-50577600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               182-359
               

               Cow position:
               chr6:54365070-54365248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               183-279
               

               Cow position:
               chr6:37603923-37603825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               183-310
               

               Cow position:
               chr6:23173304-23173180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               183-316
               

               Cow position:
               chr6:51019410-51019272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 134
               

               Conread position:
               183-332
               

               Cow position:
               chr6:66590328-66590181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               183-352
               

               Cow position:
               chr6:36891905-36891738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               183-352
               

               Cow position:
               chr6:60347366-60347541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               183-353
               

               Cow position:
               chr6:31928894-31928722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               183-353
               

               Cow position:
               chr6:46558310-46558143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               183-354
               

               Cow position:
               chr6:410960-411131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 101
               

               Conread position:
               183-354
               

               Cow position:
               chr6:10613088-10612926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               183-354
               

               Cow position:
               chr6:16091153-16090988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               183-354
               

               Cow position:
               chr6:21293241-21293409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               183-354
               

               Cow position:
               chr6:30122912-30123085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               183-354
               

               Cow position:
               chr6:38771529-38771365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               183-354
               

               Cow position:
               chr6:61269575-61269397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               183-357
               

               Cow position:
               chr6:16380807-16380626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               183-357
               

               Cow position:
               chr6:32453646-32453467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 143
               

               Conread position:
               183-357
               

               Cow position:
               chr6:47151073-47150901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               183-358
               

               Cow position:
               chr6:54840245-54840427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               183-359
               

               Cow position:
               chr6:2078562-2078735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:5330675-5330492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               23, 133
               

               Conread position:
               183-359
               

               Cow position:
               chr6:5601958-5601779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 161
               

               Conread position:
               183-359
               

               Cow position:
               chr6:8369680-8369501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               183-359
               

               Cow position:
               chr6:8562971-8562800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               183-359
               

               Cow position:
               chr6:10163933-10163745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:13565340-13565166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               183-359
               

               Cow position:
               chr6:14150125-14150300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               183-359
               

               Cow position:
               chr6:14913979-14914156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               183-359
               

               Cow position:
               chr6:15300586-15300753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:19936313-19936490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               183-359
               

               Cow position:
               chr6:21052191-21052370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               183-359
               

               Cow position:
               chr6:22876671-22876851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:24110541-24110361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:24776395-24776218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               183-359
               

               Cow position:
               chr6:30983770-30983599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               183-359
               

               Cow position:
               chr6:33510045-33509866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               183-359
               

               Cow position:
               chr6:35180998-35181177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               83, 14
               

               Conread position:
               183-359
               

               Cow position:
               chr6:35726348-35726174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               183-359
               

               Cow position:
               chr6:37395145-37395321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               183-359
               

               Cow position:
               chr6:44543888-44544069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:51529933-51530108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               183-359
               

               Cow position:
               chr6:53841246-53841426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr6:55548277-55548454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               183-359
               

               Cow position:
               chr6:59015320-59015494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               183-359
               

               Cow position:
               chr6:63251666-63251843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               183-359
               

               Cow position:
               chr6:64432192-64432018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               184-278
               

               Cow position:
               chr6:32809572-32809478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-328
               

               Cow position:
               chr6:63762324-63762470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               184-337
               

               Cow position:
               chr6:62849179-62849027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               184-343
               

               Cow position:
               chr6:49824837-49824998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               184-345
               

               Cow position:
               chr6:24514277-24514449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               184-345
               

               Cow position:
               chr6:53138682-53138843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               184-350
               

               Cow position:
               chr6:17313992-17313824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               184-353
               

               Cow position:
               chr6:53932589-53932761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 118
               

               Conread position:
               184-353
               

               Cow position:
               chr6:59602959-59603122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               184-354
               

               Cow position:
               chr6:3351284-3351113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               109, 79
               

               Conread position:
               184-354
               

               Cow position:
               chr6:26155399-26155233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               184-354
               

               Cow position:
               chr6:28561915-28562084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               184-355
               

               Cow position:
               chr6:42035023-42034856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               136, 11
               

               Conread position:
               184-357
               

               Cow position:
               chr6:43787652-43787829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr6:1173693-1173877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               184-359
               

               Cow position:
               chr6:1475592-1475425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               184-359
               

               Cow position:
               chr6:6201689-6201504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 145
               

               Conread position:
               184-359
               

               Cow position:
               chr6:16137510-16137691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr6:16502786-16502966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr6:19045884-19045702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr6:21470176-21470349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr6:43906425-43906604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr6:45920963-45921134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               184-359
               

               Cow position:
               chr6:47520309-47520133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               184-359
               

               Cow position:
               chr6:58697374-58697552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               184-359
               

               Cow position:
               chr6:68246578-68246754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               185-283
               

               Cow position:
               chr6:55764290-55764196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               185-350
               

               Cow position:
               chr6:54828064-54828234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               185-351
               

               Cow position:
               chr6:13653602-13653431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               185-351
               

               Cow position:
               chr6:55044386-55044554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 47
               

               Conread position:
               185-353
               

               Cow position:
               chr6:1704049-1703886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               185-353
               

               Cow position:
               chr6:12099433-12099601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               185-353
               

               Cow position:
               chr6:18440223-18440392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 44
               

               Conread position:
               185-353
               

               Cow position:
               chr6:47540587-47540757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               185-354
               

               Cow position:
               chr6:38640489-38640318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               185-354
               

               Cow position:
               chr6:42483669-42483499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               100, 21
               

               Conread position:
               185-357
               

               Cow position:
               chr6:3952775-3952600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               185-357
               

               Cow position:
               chr6:23401740-23401911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               185-359
               

               Cow position:
               chr6:12761534-12761359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               185-359
               

               Cow position:
               chr6:15172809-15172648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               185-359
               

               Cow position:
               chr6:21061635-21061806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 85
               

               Conread position:
               185-359
               

               Cow position:
               chr6:21183968-21184143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               93, 148
               

               Conread position:
               185-359
               

               Cow position:
               chr6:44541058-44540887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               185-359
               

               Cow position:
               chr6:47246038-47245860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               185-359
               

               Cow position:
               chr6:47305597-47305421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               185-359
               

               Cow position:
               chr6:54889860-54889679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               185-359
               

               Cow position:
               chr6:55417279-55417448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               186-338
               

               Cow position:
               chr6:62539355-62539502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               186-347
               

               Cow position:
               chr6:66058455-66058616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-354
               

               Cow position:
               chr6:34423206-34423374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-354
               

               Cow position:
               chr6:36808948-36809120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               186-358
               

               Cow position:
               chr6:17997063-17997239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               186-358
               

               Cow position:
               chr6:26408248-26408424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               186-358
               

               Cow position:
               chr6:38020929-38020754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               186-358
               

               Cow position:
               chr6:48436083-48435911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               186-359
               

               Cow position:
               chr6:14383928-14383755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               186-359
               

               Cow position:
               chr6:23938305-23938140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               186-359
               

               Cow position:
               chr6:32336294-32336111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               186-359
               

               Cow position:
               chr6:60850953-60850780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-328
               

               Cow position:
               chr6:67810733-67810874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               187-347
               

               Cow position:
               chr6:611796-611641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               187-347
               

               Cow position:
               chr6:58370999-58370842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               187-349
               

               Cow position:
               chr6:63233770-63233605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               187-354
               

               Cow position:
               chr6:2547515-2547340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               187-354
               

               Cow position:
               chr6:26728290-26728447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               187-354
               

               Cow position:
               chr6:36570718-36570544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               187-359
               

               Cow position:
               chr6:15937601-15937775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               187-359
               

               Cow position:
               chr6:21350778-21350953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               84, 156
               

               Conread position:
               187-359
               

               Cow position:
               chr6:36225363-36225188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               187-359
               

               Cow position:
               chr6:37994457-37994288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               167, 82
               

               Conread position:
               187-359
               

               Cow position:
               chr6:62437670-62437494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               187-359
               

               Cow position:
               chr6:65871282-65871117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               188-335
               

               Cow position:
               chr6:59759422-59759274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               188-351
               

               Cow position:
               chr6:24468146-24468308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 94
               

               Conread position:
               188-353
               

               Cow position:
               chr6:38441430-38441258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               188-359
               

               Cow position:
               chr6:21175585-21175417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               188-359
               

               Cow position:
               chr6:35171864-35171685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               188-359
               

               Cow position:
               chr6:59297297-59297132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               188-359
               

               Cow position:
               chr6:66302355-66302526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               189-357
               

               Cow position:
               chr6:59101068-59101240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               189-359
               

               Cow position:
               chr6:62079167-62079002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               190-357
               

               Cow position:
               chr6:36939124-36938949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               190-359
               

               Cow position:
               chr6:15587344-15587515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               190-359
               

               Cow position:
               chr6:53346215-53346054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               191-350
               

               Cow position:
               chr6:56850266-56850108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               191-352
               

               Cow position:
               chr6:14263642-14263803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               191-353
               

               Cow position:
               chr6:62370937-62371095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               191-354
               

               Cow position:
               chr6:8600253-8600084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               191-354
               

               Cow position:
               chr6:17068408-17068563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               191-354
               

               Cow position:
               chr6:44194307-44194464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               191-354
               

               Cow position:
               chr6:67451123-67451286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               191-357
               

               Cow position:
               chr6:15446944-15447116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               191-357
               

               Cow position:
               chr6:22215212-22215389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               191-359
               

               Cow position:
               chr6:1429881-1429720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               191-359
               

               Cow position:
               chr6:4699955-4699787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               191-359
               

               Cow position:
               chr6:10176052-10176222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               191-359
               

               Cow position:
               chr6:18447267-18447438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               87, 12
               

               Conread position:
               191-359
               

               Cow position:
               chr6:24536279-24536452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               191-359
               

               Cow position:
               chr6:34463341-34463508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 86
               

               Conread position:
               191-359
               

               Cow position:
               chr6:35436239-35436074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               191-359
               

               Cow position:
               chr6:48803391-48803556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               191-359
               

               Cow position:
               chr6:49686067-49685897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               191-359
               

               Cow position:
               chr6:53711656-53711482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               191-359
               

               Cow position:
               chr6:58304661-58304494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               191-359
               

               Cow position:
               chr6:61631359-61631529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               191-359
               

               Cow position:
               chr6:67282131-67281974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               192-352
               

               Cow position:
               chr6:5095294-5095455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               192-353
               

               Cow position:
               chr6:24491284-24491118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               192-354
               

               Cow position:
               chr6:21535288-21535124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               192-354
               

               Cow position:
               chr6:45159809-45159973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               192-359
               

               Cow position:
               chr6:34569664-34569487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 122
               

               Conread position:
               192-359
               

               Cow position:
               chr6:43345192-43345362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               192-359
               

               Cow position:
               chr6:43540014-43540171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               162, 89
               

               Conread position:
               192-359
               

               Cow position:
               chr6:61514951-61515108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               193-358
               

               Cow position:
               chr6:21235292-21235124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 12
               

               Conread position:
               194-354
               

               Cow position:
               chr6:18117803-18117965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               194-359
               

               Cow position:
               chr6:15243084-15242916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 12
               

               Conread position:
               194-359
               

               Cow position:
               chr6:39358097-39358261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               195-351
               

               Cow position:
               chr6:16287823-16287973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-353
               

               Cow position:
               chr6:25614846-25615005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               86, 11
               

               Conread position:
               195-354
               

               Cow position:
               chr6:3937032-3936867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               195-354
               

               Cow position:
               chr6:29485329-29485168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-359
               

               Cow position:
               chr6:4383718-4383559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               195-359
               

               Cow position:
               chr6:36196447-36196290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               195-359
               

               Cow position:
               chr6:48278651-48278809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               196-347
               

               Cow position:
               chr6:50444871-50445026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               196-357
               

               Cow position:
               chr6:50883435-50883594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               196-358
               

               Cow position:
               chr6:6547270-6547427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               196-359
               

               Cow position:
               chr6:35989994-35990154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               196-359
               

               Cow position:
               chr6:37692994-37692830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               196-359
               

               Cow position:
               chr6:48097359-48097521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               138, 33
               

               Conread position:
               196-359
               

               Cow position:
               chr6:62056855-62056694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               197-302
               

               Cow position:
               chr6:18903794-18903899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               197-322
               

               Cow position:
               chr6:60674074-60673951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               197-331
               

               Cow position:
               chr6:54141063-54140934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               197-335
               

               Cow position:
               chr6:57404893-57405038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               197-353
               

               Cow position:
               chr6:15305814-15305654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               197-353
               

               Cow position:
               chr6:37129692-37129849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               197-354
               

               Cow position:
               chr6:29852812-29852981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               197-354
               

               Cow position:
               chr6:36203064-36202903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               197-354
               

               Cow position:
               chr6:53024568-53024719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               197-355
               

               Cow position:
               chr6:55646706-55646867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 38
               

               Conread position:
               197-356
               

               Cow position:
               chr6:60778012-60777853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               197-357
               

               Cow position:
               chr6:1103502-1103657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 29
               

               Conread position:
               197-357
               

               Cow position:
               chr6:8966331-8966178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               157, 74
               

               Conread position:
               197-357
               

               Cow position:
               chr6:12631736-12631580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               197-357
               

               Cow position:
               chr6:29496235-29496074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               197-359
               

               Cow position:
               chr6:143135-143295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:19446496-19446329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:32268643-32268808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:37149425-37149269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:44078758-44078594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:47173794-47173948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:49421553-49421712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               197-359
               

               Cow position:
               chr6:53811829-53811662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:54490503-54490653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr6:55061113-55060942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               198-345
               

               Cow position:
               chr6:11247010-11246861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               198-354
               

               Cow position:
               chr6:8326040-8325881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               198-359
               

               Cow position:
               chr6:6060332-6060492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               198-359
               

               Cow position:
               chr6:19293040-19292881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               198-359
               

               Cow position:
               chr6:30024119-30023965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               198-359
               

               Cow position:
               chr6:32126294-32126136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               96, 77
               

               Conread position:
               198-359
               

               Cow position:
               chr6:57467841-57467676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               199-319
               

               Cow position:
               chr6:16700495-16700371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               199-345
               

               Cow position:
               chr6:67965660-67965806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               199-353
               

               Cow position:
               chr6:42728887-42728731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               199-353
               

               Cow position:
               chr6:57545988-57546143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               199-354
               

               Cow position:
               chr6:63168522-63168682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               199-357
               

               Cow position:
               chr6:7539814-7539655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 143
               

               Conread position:
               199-357
               

               Cow position:
               chr6:40032420-40032272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               199-358
               

               Cow position:
               chr6:4760234-4760072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               199-358
               

               Cow position:
               chr6:6996658-6996818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 117
               

               Conread position:
               199-359
               

               Cow position:
               chr6:10399667-10399830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 127
               

               Conread position:
               199-359
               

               Cow position:
               chr6:13367523-13367365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 76
               

               Conread position:
               199-359
               

               Cow position:
               chr6:14152650-14152811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               199-359
               

               Cow position:
               chr6:21475966-21475807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               199-359
               

               Cow position:
               chr6:23058455-23058291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               199-359
               

               Cow position:
               chr6:47356067-47355903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               199-359
               

               Cow position:
               chr6:52478170-52478331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               199-359
               

               Cow position:
               chr6:62224662-62224501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               199-359
               

               Cow position:
               chr6:65264310-65264466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               199-359
               

               Cow position:
               chr6:66839434-66839274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-359
               

               Cow position:
               chr6:66947579-66947742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               200-330
               

               Cow position:
               chr6:65831603-65831469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 124
               

               Conread position:
               200-344
               

               Cow position:
               chr6:23381426-23381574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               200-347
               

               Cow position:
               chr6:16016275-16016125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               200-347
               

               Cow position:
               chr6:47989666-47989517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               200-353
               

               Cow position:
               chr6:10039966-10039809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               200-353
               

               Cow position:
               chr6:12669338-12669181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               200-357
               

               Cow position:
               chr6:62724798-62724637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 111
               

               Conread position:
               200-359
               

               Cow position:
               chr6:16411853-16411690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               200-359
               

               Cow position:
               chr6:19225152-19225304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               200-359
               

               Cow position:
               chr6:28088807-28088968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 111
               

               Conread position:
               200-359
               

               Cow position:
               chr6:33206969-33206816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               200-359
               

               Cow position:
               chr6:66259977-66259809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               201-342
               

               Cow position:
               chr6:43770662-43770802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               201-353
               

               Cow position:
               chr6:40833781-40833929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               201-359
               

               Cow position:
               chr6:13097159-13097321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               202-359
               

               Cow position:
               chr6:45094816-45094652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               203-329
               

               Cow position:
               chr6:36846381-36846506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               203-343
               

               Cow position:
               chr6:55607712-55607846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               203-349
               

               Cow position:
               chr6:6117411-6117555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               203-354
               

               Cow position:
               chr6:8726914-8726762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               203-354
               

               Cow position:
               chr6:38853419-38853574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               203-357
               

               Cow position:
               chr6:18144438-18144279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               203-359
               

               Cow position:
               chr6:2585177-2585022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               203-359
               

               Cow position:
               chr6:24781314-24781479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               78, 132
               

               Conread position:
               203-359
               

               Cow position:
               chr6:49398392-49398540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               203-359
               

               Cow position:
               chr6:60118379-60118230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               203-359
               

               Cow position:
               chr6:65903389-65903544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               204-359
               

               Cow position:
               chr6:42567732-42567572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               205-348
               

               Cow position:
               chr6:11262976-11262837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               205-351
               

               Cow position:
               chr6:26764587-26764740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               205-351
               

               Cow position:
               chr6:36537128-36537273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               205-351
               

               Cow position:
               chr6:55945721-55945876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               205-353
               

               Cow position:
               chr6:38033093-38032943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               205-354
               

               Cow position:
               chr6:38207250-38207405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               205-354
               

               Cow position:
               chr6:54406570-54406715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               205-355
               

               Cow position:
               chr6:58725602-58725453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:5445903-5445747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 85
               

               Conread position:
               205-359
               

               Cow position:
               chr6:5609207-5609367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:8186952-8187110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:12928375-12928222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               205-359
               

               Cow position:
               chr6:13742222-13742068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 128
               

               Conread position:
               205-359
               

               Cow position:
               chr6:16627964-16627814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:19402080-19401930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:19996850-19996694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               76, 121
               

               Conread position:
               205-359
               

               Cow position:
               chr6:21004915-21004756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:21083306-21083461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:23532881-23532735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:24903340-24903498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:25772984-25773139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               78, 59
               

               Conread position:
               205-359
               

               Cow position:
               chr6:34076398-34076241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               127, 66
               

               Conread position:
               205-359
               

               Cow position:
               chr6:34475323-34475481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:34721876-34722025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               205-359
               

               Cow position:
               chr6:35984899-35985057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:41014739-41014899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:46173023-46173179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:50504691-50504536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:57079661-57079503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:57089439-57089283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:59265478-59265621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:60186416-60186583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:61110017-61109867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               205-359
               

               Cow position:
               chr6:69374599-69374753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 119
               

               Conread position:
               206-345
               

               Cow position:
               chr6:21346919-21347057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               206-353
               

               Cow position:
               chr6:32866987-32867132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               206-354
               

               Cow position:
               chr6:7128170-7128318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 101
               

               Conread position:
               206-354
               

               Cow position:
               chr6:67951191-67951034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               206-355
               

               Cow position:
               chr6:46466052-46465905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               206-356
               

               Cow position:
               chr6:31847010-31847158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               206-358
               

               Cow position:
               chr6:32006222-32006374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-359
               

               Cow position:
               chr6:10105749-10105899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               206-359
               

               Cow position:
               chr6:19563245-19563404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               206-359
               

               Cow position:
               chr6:26054666-26054825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               206-359
               

               Cow position:
               chr6:30825543-30825689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               207-354
               

               Cow position:
               chr6:60143966-60144113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               209-346
               

               Cow position:
               chr6:1941603-1941739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               209-359
               

               Cow position:
               chr6:63182516-63182368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 66
               

               Conread position:
               210-350
               

               Cow position:
               chr6:57935346-57935484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               210-359
               

               Cow position:
               chr6:9832427-9832286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               210-359
               

               Cow position:
               chr6:44867316-44867463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               210-359
               

               Cow position:
               chr6:48379381-48379534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               211-359
               

               Cow position:
               chr6:60740239-60740094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               212-336
               

               Cow position:
               chr6:30688281-30688409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               212-358
               

               Cow position:
               chr6:15058603-15058457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               212-359
               

               Cow position:
               chr6:27219394-27219247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               212-359
               

               Cow position:
               chr6:41375998-41375849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               212-359
               

               Cow position:
               chr6:56986420-56986571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               213-359
               

               Cow position:
               chr6:2758009-2757864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               213-359
               

               Cow position:
               chr6:14471592-14471442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               213-359
               

               Cow position:
               chr6:34380589-34380735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               213-359
               

               Cow position:
               chr6:41733862-41733712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               213-359
               

               Cow position:
               chr6:47022786-47022640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 68
               

               Conread position:
               213-359
               

               Cow position:
               chr6:61644629-61644779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               214-359
               

               Cow position:
               chr6:5113821-5113973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               214-359
               

               Cow position:
               chr6:40682442-40682586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               215-343
               

               Cow position:
               chr6:78909-79035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               215-353
               

               Cow position:
               chr6:51835623-51835485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               215-359
               

               Cow position:
               chr6:61681303-61681157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               217-359
               

               Cow position:
               chr6:19696032-19695886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               218-359
               

               Cow position:
               chr6:1870975-1871118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               218-359
               

               Cow position:
               chr6:39415047-39414902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               219-353
               

               Cow position:
               chr6:28483238-28483102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               220-359
               

               Cow position:
               chr6:9718697-9718834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-359
               

               Cow position:
               chr6:35842879-35842738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               223-352
               

               Cow position:
               chr6:53235436-53235566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               230-359
               

               Cow position:
               chr6:38641704-38641572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr6:30895781-30895912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               234-359
               

               Cow position:
               chr6:69153618-69153489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               238-353
               

               Cow position:
               chr6:55450136-55450019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               238-353
               

               Cow position:
               chr6:67963853-67963970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               238-359
               

               Cow position:
               chr6:6067502-6067622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               238-359
               

               Cow position:
               chr6:16352161-16352274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.
Conread position:	168-359
Cow position:	chr6:62670144-62669945 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	140
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	24, 0
Conread position:	169-359
Cow position:	chr6:29851638-29851448 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	134
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	112, 28
Conread position:	170-359
Cow position:	chr6:8688580-8688767 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	134
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	116, 0
Conread position:	172-357
Cow position:	chr6:54127554-54127731 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	140
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	34, 0
Conread position:	174-359
Cow position:	chr6:35318871-35319054 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	134
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	111, 30
Conread position:	175-359
Cow position:	chr6:4469030-4468848 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	139
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	99, 22
Conread position:	176-337
Cow position:	chr6:60088206-60088375 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	129
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	22, 119
Conread position:	176-359
Cow position:	chr6:7189868-7190039 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	135
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	21, 0
Conread position:	177-353
Cow position:	chr6:33450714-33450888 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	128
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	17, 44
Conread position:	178-354
Cow position:	chr6:50771099-50771278 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	136
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	11, 29
Conread position:	179-354
Cow position:	chr6:7801139-7801312 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	132
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	97, 50
Conread position:	179-359
Cow position:	chr6:19264241-19264419 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	137
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	90, 12
Conread position:	180-301
Cow position:	chr6:12711532-12711653 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	94
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	180-358
Cow position:	chr6:28559806-28559618 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	141
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	5, 0
Conread position:	180-359
Cow position:	chr6:55282032-55282214 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	134
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	86, 44
Conread position:	181-352
Cow position:	chr6:4048894-4049066 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	127
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	104, 26
Conread position:	181-359
Cow position:	chr6:41657524-41657347 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	130
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	93, 100
Conread position:	182-347
Cow position:	chr6:6850575-6850415 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	126
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	18, 49
Conread position:	182-355
Cow position:	chr6:60273752-60273927 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	128
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	19, 38
Conread position:	182-357
Cow position:	chr6:15974262-15974442 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	137
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	17, 0