Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-142
Cow position: chr17:11397631-11397490 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 81

Conread position: 1-146
Cow position: chr17:24824208-24824072 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-190
Cow position: chr17:5694987-5695170 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-397
Cow position: chr17:6844138-6843751 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 254
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 79

Conread position: 2-113
Cow position: chr17:6329073-6328961 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 72

Conread position: 2-121
Cow position: chr17:40792182-40792068 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 2-127
Cow position: chr17:25916856-25916731 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 64

Conread position: 2-127
Cow position: chr17:31585392-31585265 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 74

Conread position: 2-128
Cow position: chr17:7142825-7142702 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 67

Conread position: 2-132
Cow position: chr17:10510699-10510828 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 2-132
Cow position: chr17:20928874-20928748 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 71

Conread position: 2-136
Cow position: chr17:20932289-20932159 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 66

Conread position: 2-136
Cow position: chr17:24821825-24821696 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 2-141
Cow position: chr17:12591126-12590988 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-141
Cow position: chr17:36268353-36268221 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 55

Conread position: 2-142
Cow position: chr17:18109126-18109262 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 66

Conread position: 2-142
Cow position: chr17:25189247-25189103 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 52

Conread position: 2-142
Cow position: chr17:35311386-35311245 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 2-143
Cow position: chr17:24149143-24149000 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 80

Conread position: 2-144
Cow position: chr17:242597-242458 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 50

Conread position: 2-144
Cow position: chr17:5006528-5006669 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 52

Conread position: 2-144
Cow position: chr17:8544267-8544128 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 27, 67

Conread position: 2-144
Cow position: chr17:21599721-21599860 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 71

Conread position: 2-144
Cow position: chr17:21697696-21697554 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 69

Conread position: 2-144
Cow position: chr17:24580337-24580478 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 2-144
Cow position: chr17:25755747-25755606 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 2-144
Cow position: chr17:36533616-36533483 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 2-144
Cow position: chr17:38647019-38646886 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 2-145
Cow position: chr17:3442709-3442847 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-145
Cow position: chr17:22564141-22564004 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 65

Conread position: 2-145
Cow position: chr17:26183182-26183043 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 2-145
Cow position: chr17:32419154-32419297 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 72

Conread position: 2-145
Cow position: chr17:34595900-34595760 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 15

Conread position: 2-146
Cow position: chr17:966779-966919 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 51

Conread position: 2-146
Cow position: chr17:1035638-1035781 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 69

Conread position: 2-146
Cow position: chr17:1256542-1256684 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-146
Cow position: chr17:3306826-3306687 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position: chr17:3498704-3498844 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 62

Conread position: 2-146
Cow position: chr17:4436273-4436411 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 2-146
Cow position: chr17:4612115-4612257 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 66

Conread position: 2-146
Cow position: chr17:5224360-5224223 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 2-146
Cow position: chr17:6566427-6566291 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 36, 55

Conread position: 2-146
Cow position: chr17:8079276-8079137 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr17:9565269-9565129 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 64

Conread position: 2-146
Cow position: chr17:9853952-9853806 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 57

Conread position: 2-146
Cow position: chr17:9911724-9911583 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 54

Conread position: 2-146
Cow position: chr17:11381756-11381900 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 73

Conread position: 2-146
Cow position: chr17:12054681-12054539 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 68

Conread position: 2-146
Cow position: chr17:12216114-12216257 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr17:13922438-13922295 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr17:14033681-14033824 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr17:16371215-16371071 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 72

Conread position: 2-146
Cow position: chr17:17222304-17222162 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 66

Conread position: 2-146
Cow position: chr17:18473138-18472996 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 2-146
Cow position: chr17:18884377-18884529 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 78

Conread position: 2-146
Cow position: chr17:20835556-20835413 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr17:20839601-20839740 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 66

Conread position: 2-146
Cow position: chr17:21003869-21004011 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 2-146
Cow position: chr17:21017756-21017614 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 2-146
Cow position: chr17:21031742-21031605 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 53

Conread position: 2-146
Cow position: chr17:21207173-21207315 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 2-146
Cow position: chr17:21335735-21335878 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr17:21710465-21710325 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 2-146
Cow position: chr17:21738916-21739064 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 75

Conread position: 2-146
Cow position: chr17:22781651-22781507 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 72

Conread position: 2-146
Cow position: chr17:22806577-22806721 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-146
Cow position: chr17:23101249-23101391 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 36

Conread position: 2-146
Cow position: chr17:23337057-23337193 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 2-146
Cow position: chr17:24490487-24490341 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 80

Conread position: 2-146
Cow position: chr17:24550136-24549989 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 73

Conread position: 2-146
Cow position: chr17:25168278-25168130 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 63

Conread position: 2-146
Cow position: chr17:26764976-26764833 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 84

Conread position: 2-146
Cow position: chr17:26818490-26818633 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 2-146
Cow position: chr17:27667229-27667374 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 54

Conread position: 2-146
Cow position: chr17:27679277-27679424 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 81

Conread position: 2-146
Cow position: chr17:30665231-30665092 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 72

Conread position: 2-146
Cow position: chr17:31231152-31231294 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr17:31481076-31481225 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 2-146
Cow position: chr17:32027496-32027642 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 80

Conread position: 2-146
Cow position: chr17:32278946-32279087 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr17:32366247-32366104 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr17:32651579-32651436 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 67

Conread position: 2-146
Cow position: chr17:33052819-33052683 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 2-146
Cow position: chr17:34207859-34208000 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr17:37163561-37163707 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 80

Conread position: 2-146
Cow position: chr17:37480032-37480173 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 69

Conread position: 2-146
Cow position: chr17:37482113-37482259 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 2-146
Cow position: chr17:38833002-38832862 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 2-146
Cow position: chr17:40312686-40312541 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 73

Conread position: 2-146
Cow position: chr17:40331726-40331585 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 72

Conread position: 2-146
Cow position: chr17:43527937-43527797 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 72

Conread position: 2-147
Cow position: chr17:1783644-1783790 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 73

Conread position: 2-147
Cow position: chr17:24077363-24077221 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 67

Conread position: 2-147
Cow position: chr17:25078043-25078177 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 2-149
Cow position: chr17:1295610-1295753 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 55

Conread position: 2-149
Cow position: chr17:11664630-11664773 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 9

Conread position: 2-149
Cow position: chr17:32950233-32950090 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 69

Conread position: 2-153
Cow position: chr17:13143731-13143877 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 2-153
Cow position: chr17:20993080-20993226 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 66

Conread position: 2-159
Cow position: chr17:36203530-36203683 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 65

Conread position: 2-168
Cow position: chr17:908702-908543 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 155, 15

Conread position: 2-170
Cow position: chr17:3518293-3518456 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 40

Conread position: 2-172
Cow position: chr17:43717355-43717526 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 145, 54

Conread position: 2-174
Cow position: chr17:24883608-24883786 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 96, 30

Conread position: 2-179
Cow position: chr17:20126572-20126394 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 145, 29

Conread position: 2-179
Cow position: chr17:22032731-22032910 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 142, 70

Conread position: 2-180
Cow position: chr17:979196-979362 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 55

Conread position: 2-180
Cow position: chr17:4824455-4824273 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 62

Conread position: 2-182
Cow position: chr17:20870141-20870323 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 39

Conread position: 2-189
Cow position: chr17:1358841-1359034 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 54

Conread position: 2-194
Cow position: chr17:24761268-24761465 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 143, 66

Conread position: 2-210
Cow position: chr17:7132491-7132695 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 72

Conread position: 2-218
Cow position: chr17:5423111-5423321 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 2-218
Cow position: chr17:6624218-6623982 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 69

Conread position: 2-218
Cow position: chr17:9746474-9746267 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 160, 54

Conread position: 2-254
Cow position: chr17:32554065-32554325 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 144, 15

Conread position: 2-264
Cow position: chr17:7760506-7760744 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 25

Conread position: 2-272
Cow position: chr17:41290061-41290333 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 144, 77

Conread position: 2-274
Cow position: chr17:9778207-9777934 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 56

Conread position: 2-276
Cow position: chr17:25707918-25707659 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 14

Conread position: 2-288
Cow position: chr17:21312851-21313113 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 172, 53

Conread position: 2-295
Cow position: chr17:11832159-11832465 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 160

Conread position: 2-303
Cow position: chr17:9117606-9117335 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 2-304
Cow position: chr17:34079142-34079412 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 63

Conread position: 2-324
Cow position: chr17:8214885-8214574 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 255, 18

Conread position: 2-325
Cow position: chr17:1061100-1061395 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 308, 70

Conread position: 2-379
Cow position: chr17:24587581-24587179 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 71

Conread position: 2-386
Cow position: chr17:1493190-1493547 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 74

Conread position: 2-395
Cow position: chr17:8690482-8690858 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 2-398
Cow position: chr17:11618545-11618178 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 30, 52

Conread position: 2-416
Cow position: chr17:11056411-11056803 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 292
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 66

Conread position: 2-432
Cow position: chr17:18860763-18861153 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 47

Conread position: 2-440
Cow position: chr17:6423720-6423276 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 84

Conread position: 2-467
Cow position: chr17:29292407-29292854 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 2-472
Cow position: chr17:5745288-5745748 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 57

Conread position: 2-476
Cow position: chr17:10528775-10529232 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 64

Conread position: 2-479
Cow position: chr17:1410280-1410730 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 71

Conread position: 2-484
Cow position: chr17:26230910-26230443 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 79

Conread position: 2-513
Cow position: chr17:3471380-3470906 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 2-513
Cow position: chr17:15333753-15334245 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 66

Conread position: 2-525
Cow position: chr17:30539293-30539786 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 50

Conread position: 2-530
Cow position: chr17:12059135-12059633 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 65

Conread position: 2-545
Cow position: chr17:24608811-24608266 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 2-546
Cow position: chr17:14088363-14088922 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 72

Conread position: 2-556
Cow position: chr17:40741608-40741041 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 2-567
Cow position: chr17:16117463-16118005 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 144

Conread position: 2-576
Cow position: chr17:18592403-18591863 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 70

Conread position: 2-579
Cow position: chr17:40771796-40771234 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 73

Conread position: 2-581
Cow position: chr17:20216125-20215538 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 12

Conread position: 2-581
Cow position: chr17:31231971-31232532 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 2-581
Cow position: chr17:35180798-35180209 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 62

Conread position: 2-583
Cow position: chr17:5767874-5767308 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 59

Conread position: 2-583
Cow position: chr17:11386477-11385909 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 2-583
Cow position: chr17:20780470-20779926 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 65

Conread position: 2-583
Cow position: chr17:28539989-28539446 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 65

Conread position: 2-583
Cow position: chr17:36817901-36817322 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 2-584
Cow position: chr17:7559709-7560249 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 372
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 326, 17

Conread position: 3-130
Cow position: chr17:10037404-10037279 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 63

Conread position: 3-144
Cow position: chr17:1063144-1063011 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 3-144
Cow position: chr17:27162613-27162474 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 67

Conread position: 3-144
Cow position: chr17:41029913-41029775 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 63

Conread position: 3-146
Cow position: chr17:11156531-11156673 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position: chr17:14265595-14265739 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 71

Conread position: 3-146
Cow position: chr17:15102926-15103068 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position: chr17:20358834-20358698 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 65

Conread position: 3-146
Cow position: chr17:20912851-20912717 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 66

Conread position: 3-146
Cow position: chr17:21243825-21243967 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position: chr17:21323251-21323117 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 68

Conread position: 3-146
Cow position: chr17:32993660-32993794 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 3-238
Cow position: chr17:7698012-7697784 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 15

Conread position: 3-380
Cow position: chr17:24787059-24787448 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 3-439
Cow position: chr17:5246856-5246431 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 3-583
Cow position: chr17:12289459-12290013 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 14

Conread position: 4-145
Cow position: chr17:3182627-3182764 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 52

Conread position: 4-147
Cow position: chr17:25901154-25901014 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 4-197
Cow position: chr17:12219979-12220183 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 51

Conread position: 4-427
Cow position: chr17:23063672-23063277 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 66

Conread position: 4-583
Cow position: chr17:34316749-34317308 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 35

Conread position: 5-144
Cow position: chr17:11281149-11281284 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 64

Conread position: 5-146
Cow position: chr17:24553965-24553824 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 69

Conread position: 5-242
Cow position: chr17:30999729-30999485 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 138, 57

Conread position: 5-451
Cow position: chr17:21039235-21038820 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 57

Conread position: 6-556
Cow position: chr17:36791087-36790541 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 7-295
Cow position: chr17:17406093-17405817 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 171, 56

Conread position: 7-395
Cow position: chr17:3781999-3781635 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 65

Conread position: 7-505
Cow position: chr17:37773581-37774083 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 61

Conread position: 7-572
Cow position: chr17:20815329-20814786 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 8-146
Cow position: chr17:5895956-5896091 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 60

Conread position: 8-149
Cow position: chr17:923832-923695 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 51

Conread position: 8-289
Cow position: chr17:15664624-15664370 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 62

Conread position: 9-146
Cow position: chr17:27048112-27047983 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 57

Conread position: 9-451
Cow position: chr17:35184992-35184570 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 65

Conread position: 11-144
Cow position: chr17:8644990-8644859 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 15-174
Cow position: chr17:29157363-29157208 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 41

Conread position: 15-218
Cow position: chr17:7810788-7810995 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 58

Conread position: 15-583
Cow position: chr17:5898577-5899118 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 16-146
Cow position: chr17:6936717-6936843 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 53

Conread position: 16-149
Cow position: chr17:26224467-26224335 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 58

Conread position: 18-540
Cow position: chr17:8926277-8926788 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 9

Conread position: 19-169
Cow position: chr17:20269544-20269395 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 53

Conread position: 20-330
Cow position: chr17:9057025-9057321 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 158, 9

Conread position: 20-542
Cow position: chr17:29715245-29715738 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 52

Conread position: 23-146
Cow position: chr17:2662352-2662229 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 45

Conread position: 23-146
Cow position: chr17:27429520-27429398 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 24-146
Cow position: chr17:1026217-1026099 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 27

Conread position: 24-581
Cow position: chr17:17452666-17453196 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 48

Conread position: 26-494
Cow position: chr17:40406243-40405801 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 47

Conread position: 26-583
Cow position: chr17:25541878-25542401 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 28-578
Cow position: chr17:27979107-27978563 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 34-520
Cow position: chr17:33386353-33385873 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 295
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 61, 205

Conread position: 35-146
Cow position: chr17:32471864-32471974 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 36-423
Cow position: chr17:3153843-3154203 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 349, 37

Conread position: 39-274
Cow position: chr17:15376244-15376019 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 28

Conread position: 39-401
Cow position: chr17:23517246-23517572 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 39-560
Cow position: chr17:22057251-22057729 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 16

Conread position: 45-397
Cow position: chr17:18266990-18266660 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 45

Conread position: 61-482
Cow position: chr17:35223472-35223055 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 62-583
Cow position: chr17:11912796-11913295 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 58

Conread position: 68-583
Cow position: chr17:17240052-17240561 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 69-581
Cow position: chr17:18815126-18814605 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 142

Conread position: 73-548
Cow position: chr17:32456492-32456958 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 73

Conread position: 85-583
Cow position: chr17:29898529-29898037 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 64

Conread position: 103-490
Cow position: chr17:9901006-9900626 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 43

Conread position: 163-508
Cow position: chr17:30712865-30712522 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 227, 39

Conread position: 174-587
Cow position: chr17:32977378-32977795 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 169

Conread position: 178-397
Cow position: chr17:2657762-2657534 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 209

Conread position: 193-544
Cow position: chr17:29810447-29810096 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 202-337
Cow position: chr17:1036097-1036231 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 205-397
Cow position: chr17:20855465-20855278 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 134, 0

Conread position: 207-420
Cow position: chr17:20083729-20083935 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 207-547
Cow position: chr17:4601760-4602098 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 101

Conread position: 207-583
Cow position: chr17:3131843-3131463 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 64

Conread position: 208-345
Cow position: chr17:3518456-3518595 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 208-423
Cow position: chr17:20858258-20858459 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 208-482
Cow position: chr17:25340747-25341028 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 208-574
Cow position: chr17:17222126-17221762 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 47

Conread position: 208-575
Cow position: chr17:6566257-6565892 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 16

Conread position: 208-581
Cow position: chr17:6155823-6155441 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 208-581
Cow position: chr17:23337232-23337602 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 131

Conread position: 208-583
Cow position: chr17:10445986-10445614 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 137

Conread position: 208-583
Cow position: chr17:16446647-16447025 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 140

Conread position: 208-583
Cow position: chr17:23883986-23884354 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 110

Conread position: 208-583
Cow position: chr17:43527763-43527385 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 39

Conread position: 208-585
Cow position: chr17:20800598-20800217 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 137

Conread position: 208-602
Cow position: chr17:40802594-40802202 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 135

Conread position: 210-475
Cow position: chr17:25141032-25140766 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 52

Conread position: 210-488
Cow position: chr17:27305943-27305665 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 122

Conread position: 210-582
Cow position: chr17:979354-979731 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 128

Conread position: 210-583
Cow position: chr17:6082323-6081944 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 39

Conread position: 211-583
Cow position: chr17:4107239-4107607 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 51

Conread position: 211-583
Cow position: chr17:4122974-4123343 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 58

Conread position: 212-580
Cow position: chr17:20358656-20358289 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 96

Conread position: 216-581
Cow position: chr17:13143908-13144267 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 123

Conread position: 217-591
Cow position: chr17:6623452-6623080 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 22

Conread position: 221-506
Cow position: chr17:14050423-14050699 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 125

Conread position: 222-522
Cow position: chr17:12326102-12326405 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 167, 124

Conread position: 223-580
Cow position: chr17:18884558-18884917 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 122

Conread position: 223-583
Cow position: chr17:29040970-29041336 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 52

Conread position: 225-581
Cow position: chr17:24618600-24618235 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 298

Conread position: 226-416
Cow position: chr17:35232235-35232440 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 228-583
Cow position: chr17:29472241-29471886 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 20

Conread position: 230-578
Cow position: chr17:5733673-5734026 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 83

Conread position: 240-543
Cow position: chr17:21923879-21924194 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 260

Conread position: 242-575
Cow position: chr17:21115456-21115793 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 247-489
Cow position: chr17:11102040-11102291 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 250-583
Cow position: chr17:50324-50657 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 92

Conread position: 255-583
Cow position: chr17:26803081-26803409 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 90

Conread position: 256-583
Cow position: chr17:2177757-2177426 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 83

Conread position: 260-580
Cow position: chr17:41014944-41014619 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 178

Conread position: 349-518
Cow position: chr17:18489893-18489724 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 44

Conread position: 349-583
Cow position: chr17:36746824-36747066 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.