Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-144
Cow position: chr21:42463850-42463996 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 59

Conread position: 1-146
Cow position: chr21:8985530-8985392 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 56

Conread position: 1-146
Cow position: chr21:38449464-38449609 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 55

Conread position: 1-583
Cow position: chr21:26743953-26744529 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 73

Conread position: 1-583
Cow position: chr21:33350729-33350131 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 72

Conread position: 2-114
Cow position: chr21:14452218-14452111 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 2-121
Cow position: chr21:12461988-12462103 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 70

Conread position: 2-132
Cow position: chr21:17183905-17183778 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 65

Conread position: 2-134
Cow position: chr21:957654-957521 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 15

Conread position: 2-136
Cow position: chr21:5392558-5392690 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 2-141
Cow position: chr21:32237277-32237145 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 55

Conread position: 2-142
Cow position: chr21:27146007-27146145 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 68

Conread position: 2-142
Cow position: chr21:45330619-45330761 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 74

Conread position: 2-143
Cow position: chr21:9477145-9477004 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 70

Conread position: 2-143
Cow position: chr21:24642502-24642364 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 53

Conread position: 2-143
Cow position: chr21:40058787-40058651 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position: chr21:643309-643178 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 2-144
Cow position: chr21:1591534-1591393 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 103

Conread position: 2-144
Cow position: chr21:10633658-10633796 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 61

Conread position: 2-144
Cow position: chr21:16789710-16789566 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-144
Cow position: chr21:28429425-28429294 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 2-144
Cow position: chr21:28443392-28443533 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position: chr21:31662447-31662305 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 71

Conread position: 2-144
Cow position: chr21:32535957-32535821 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 52

Conread position: 2-144
Cow position: chr21:47764133-47764268 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 2-145
Cow position: chr21:3361031-3361171 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 30

Conread position: 2-145
Cow position: chr21:15911382-15911244 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 68

Conread position: 2-145
Cow position: chr21:17175133-17174988 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 76

Conread position: 2-145
Cow position: chr21:21480198-21480339 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 2-145
Cow position: chr21:40589503-40589639 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 2-145
Cow position: chr21:41155845-41155704 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 51

Conread position: 2-145
Cow position: chr21:41198422-41198567 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 74

Conread position: 2-146
Cow position: chr21:33703-33564 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 55

Conread position: 2-146
Cow position: chr21:724904-725049 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 2-146
Cow position: chr21:1464213-1464071 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 57

Conread position: 2-146
Cow position: chr21:3763757-3763895 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 54

Conread position: 2-146
Cow position: chr21:4189818-4189677 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 62

Conread position: 2-146
Cow position: chr21:4281889-4282025 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 52

Conread position: 2-146
Cow position: chr21:4399785-4399642 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 60

Conread position: 2-146
Cow position: chr21:4998504-4998644 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 2-146
Cow position: chr21:5636736-5636878 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 2-146
Cow position: chr21:9416230-9416085 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 56

Conread position: 2-146
Cow position: chr21:10001057-10000923 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 54

Conread position: 2-146
Cow position: chr21:10114351-10114486 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 2-146
Cow position: chr21:10151777-10151637 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 55

Conread position: 2-146
Cow position: chr21:12617119-12616982 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 2-146
Cow position: chr21:13128114-13128251 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 2-146
Cow position: chr21:13163873-13163733 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 68

Conread position: 2-146
Cow position: chr21:13488504-13488362 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 2-146
Cow position: chr21:13738550-13738411 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 54

Conread position: 2-146
Cow position: chr21:13763603-13763465 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 2-146
Cow position: chr21:15445091-15445236 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 73

Conread position: 2-146
Cow position: chr21:18494951-18494808 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr21:18790577-18790713 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 66

Conread position: 2-146
Cow position: chr21:19363480-19363621 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 69

Conread position: 2-146
Cow position: chr21:20925524-20925664 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 55

Conread position: 2-146
Cow position: chr21:24858297-24858154 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 2-146
Cow position: chr21:26241810-26241667 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 68

Conread position: 2-146
Cow position: chr21:28027789-28027646 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 68

Conread position: 2-146
Cow position: chr21:28191014-28190871 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr21:28512511-28512375 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-146
Cow position: chr21:29069347-29069486 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position: chr21:30231709-30231859 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 78

Conread position: 2-146
Cow position: chr21:30592322-30592461 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position: chr21:31676481-31676341 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 57

Conread position: 2-146
Cow position: chr21:32339755-32339894 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 54

Conread position: 2-146
Cow position: chr21:33791384-33791525 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 68

Conread position: 2-146
Cow position: chr21:34390993-34391128 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 2-146
Cow position: chr21:34659016-34658877 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 64

Conread position: 2-146
Cow position: chr21:35897650-35897783 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position: chr21:36162978-36163120 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 63

Conread position: 2-146
Cow position: chr21:36642889-36642750 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 62

Conread position: 2-146
Cow position: chr21:37345115-37345259 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 74

Conread position: 2-146
Cow position: chr21:39403554-39403696 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 72

Conread position: 2-146
Cow position: chr21:40244422-40244277 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 72

Conread position: 2-146
Cow position: chr21:42414119-42414260 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 10

Conread position: 2-146
Cow position: chr21:44825903-44826041 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 2-146
Cow position: chr21:45473770-45473914 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 24, 59

Conread position: 2-146
Cow position: chr21:49700052-49700193 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 67

Conread position: 2-147
Cow position: chr21:2679538-2679394 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 86

Conread position: 2-147
Cow position: chr21:28244451-28244317 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 2-147
Cow position: chr21:39450181-39450327 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 79

Conread position: 2-148
Cow position: chr21:40134142-40133997 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 2-149
Cow position: chr21:17193771-17193920 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 2-149
Cow position: chr21:33263831-33263690 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr21:38900760-38900614 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 2-153
Cow position: chr21:82061-81906 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 2-153
Cow position: chr21:7581924-7582074 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 2-153
Cow position: chr21:13048213-13048361 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 42

Conread position: 2-153
Cow position: chr21:13840307-13840159 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 67

Conread position: 2-154
Cow position: chr21:31511268-31511128 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 2-168
Cow position: chr21:14126030-14125870 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 74

Conread position: 2-170
Cow position: chr21:32297525-32297697 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 147, 71

Conread position: 2-171
Cow position: chr21:21077308-21077133 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 120, 69

Conread position: 2-172
Cow position: chr21:26244902-26244748 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-179
Cow position: chr21:39401576-39401396 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 65

Conread position: 2-180
Cow position: chr21:15584438-15584608 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 31

Conread position: 2-205
Cow position: chr21:29002176-29002392 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 84

Conread position: 2-214
Cow position: chr21:9028607-9028394 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 72

Conread position: 2-215
Cow position: chr21:46829288-46829492 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 167, 64

Conread position: 2-251
Cow position: chr21:24094766-24095032 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 74

Conread position: 2-266
Cow position: chr21:41597803-41597528 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 67

Conread position: 2-273
Cow position: chr21:21223275-21223024 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 220, 70

Conread position: 2-274
Cow position: chr21:6713544-6713800 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 128, 11

Conread position: 2-290
Cow position: chr21:36795582-36795323 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 2-291
Cow position: chr21:33562996-33562736 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 66

Conread position: 2-291
Cow position: chr21:36793874-36793604 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 2-295
Cow position: chr21:12960917-12961195 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 2-295
Cow position: chr21:30607107-30607385 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 2-316
Cow position: chr21:24765272-24764964 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 46

Conread position: 2-322
Cow position: chr21:42384492-42384199 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 65

Conread position: 2-327
Cow position: chr21:47802275-47802575 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 2-330
Cow position: chr21:2785794-2786110 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 70

Conread position: 2-336
Cow position: chr21:41974393-41974701 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 2-337
Cow position: chr21:5137502-5137831 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 44

Conread position: 2-338
Cow position: chr21:30990288-30990593 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 2-351
Cow position: chr21:11644988-11645323 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 66

Conread position: 2-372
Cow position: chr21:7068035-7067668 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 148

Conread position: 2-380
Cow position: chr21:23586862-23586501 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 2-392
Cow position: chr21:4795208-4794847 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 30

Conread position: 2-399
Cow position: chr21:42501021-42500655 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 74

Conread position: 2-402
Cow position: chr21:31159245-31158871 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 2-408
Cow position: chr21:25382996-25382602 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 2-446
Cow position: chr21:5566982-5566544 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 2-448
Cow position: chr21:42913763-42914178 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 30

Conread position: 2-467
Cow position: chr21:6051489-6051022 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 64

Conread position: 2-469
Cow position: chr21:24222556-24223004 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 69

Conread position: 2-502
Cow position: chr21:27743729-27743250 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 75

Conread position: 2-514
Cow position: chr21:41579738-41579224 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 353
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 75

Conread position: 2-518
Cow position: chr21:23683530-23683031 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 53

Conread position: 2-532
Cow position: chr21:33982824-33983328 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 30

Conread position: 2-581
Cow position: chr21:5898417-5898979 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 66

Conread position: 2-581
Cow position: chr21:29484961-29484394 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 2-582
Cow position: chr21:24607373-24606836 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 381
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 73

Conread position: 2-583
Cow position: chr21:3047658-3047095 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 21

Conread position: 2-583
Cow position: chr21:18289645-18289092 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 21

Conread position: 2-583
Cow position: chr21:18828325-18828896 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 25

Conread position: 2-583
Cow position: chr21:22718796-22719344 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 2-583
Cow position: chr21:24796056-24796598 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 2-583
Cow position: chr21:27863533-27864098 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 2-583
Cow position: chr21:33210184-33209632 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 71

Conread position: 2-583
Cow position: chr21:33419739-33420288 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 55

Conread position: 2-583
Cow position: chr21:33997245-33997794 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 44

Conread position: 2-602
Cow position: chr21:4276608-4277193 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 14

Conread position: 3-144
Cow position: chr21:394006-393866 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 3-144
Cow position: chr21:9998736-9998876 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 70

Conread position: 3-145
Cow position: chr21:11706764-11706908 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 73

Conread position: 3-145
Cow position: chr21:25764619-25764478 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 3-145
Cow position: chr21:42348693-42348834 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 3-146
Cow position: chr21:911986-912124 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 3-146
Cow position: chr21:3813499-3813640 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 65

Conread position: 3-146
Cow position: chr21:9990497-9990357 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 3-146
Cow position: chr21:19258811-19258669 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 71

Conread position: 3-146
Cow position: chr21:24131061-24130923 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 3-149
Cow position: chr21:8125816-8125960 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 57

Conread position: 3-149
Cow position: chr21:44671738-44671593 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 3-164
Cow position: chr21:28924095-28923937 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 13

Conread position: 3-179
Cow position: chr21:43357277-43357463 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 73

Conread position: 3-228
Cow position: chr21:14464571-14464336 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 93

Conread position: 3-267
Cow position: chr21:24759054-24758789 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 56

Conread position: 3-581
Cow position: chr21:12801765-12802350 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 68

Conread position: 3-582
Cow position: chr21:12154120-12153570 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 69

Conread position: 3-583
Cow position: chr21:9710724-9711290 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 61

Conread position: 3-583
Cow position: chr21:13089483-13090044 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 68

Conread position: 3-583
Cow position: chr21:33729417-33728864 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 56

Conread position: 4-144
Cow position: chr21:41878451-41878321 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 4-146
Cow position: chr21:7716804-7716948 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 72

Conread position: 4-146
Cow position: chr21:13303800-13303662 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 66

Conread position: 4-146
Cow position: chr21:43631219-43631360 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 81

Conread position: 4-147
Cow position: chr21:17642984-17643131 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 72

Conread position: 4-147
Cow position: chr21:28989594-28989454 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 52

Conread position: 4-153
Cow position: chr21:27229814-27229959 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 4-338
Cow position: chr21:17282685-17282378 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 63

Conread position: 4-466
Cow position: chr21:38692166-38691740 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 395, 59

Conread position: 4-583
Cow position: chr21:2927222-2927804 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 5-146
Cow position: chr21:23322097-23322241 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 72

Conread position: 5-464
Cow position: chr21:37706438-37706866 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 18

Conread position: 5-581
Cow position: chr21:20910113-20910671 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 5-584
Cow position: chr21:37299443-37298898 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 27

Conread position: 6-145
Cow position: chr21:3585385-3585515 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 6-146
Cow position: chr21:9334282-9334416 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 63

Conread position: 6-146
Cow position: chr21:20044789-20044931 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 7-582
Cow position: chr21:28211179-28210618 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 173

Conread position: 8-583
Cow position: chr21:20262357-20262908 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 64

Conread position: 10-146
Cow position: chr21:35897456-35897325 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 16-146
Cow position: chr21:28029369-28029240 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 19-146
Cow position: chr21:1511034-1510916 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 20-264
Cow position: chr21:13256769-13256544 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 20-279
Cow position: chr21:28907683-28907919 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 233, 36

Conread position: 21-140
Cow position: chr21:10823521-10823402 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 59

Conread position: 24-144
Cow position: chr21:28993662-28993781 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 24-146
Cow position: chr21:5153578-5153460 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 44

Conread position: 25-146
Cow position: chr21:426752-426632 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 25-314
Cow position: chr21:42053311-42053590 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 8

Conread position: 27-146
Cow position: chr21:31278735-31278622 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 28-490
Cow position: chr21:20548955-20549401 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 28

Conread position: 33-447
Cow position: chr21:14762552-14762949 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 278
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 317, 40

Conread position: 34-397
Cow position: chr21:46463144-46462812 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 299, 39

Conread position: 34-545
Cow position: chr21:21000080-21000588 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 66-503
Cow position: chr21:36909750-36909325 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 83

Conread position: 68-544
Cow position: chr21:34835505-34835987 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 134

Conread position: 69-291
Cow position: chr21:8546288-8546495 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 70-575
Cow position: chr21:21033536-21033029 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 329
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 105

Conread position: 148-582
Cow position: chr21:31661910-31661486 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 43

Conread position: 157-471
Cow position: chr21:8451696-8451402 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 172-578
Cow position: chr21:2260831-2261249 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 182

Conread position: 180-583
Cow position: chr21:1058640-1058229 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 148

Conread position: 186-583
Cow position: chr21:21076957-21076564 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 188-478
Cow position: chr21:9218754-9218467 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 13

Conread position: 198-555
Cow position: chr21:13585307-13585663 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 20

Conread position: 198-583
Cow position: chr21:28908027-28908383 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 200-399
Cow position: chr21:15976453-15976260 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 206-559
Cow position: chr21:13395361-13395019 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 206-583
Cow position: chr21:44658125-44657749 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 142

Conread position: 206-583
Cow position: chr21:48484636-48485009 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 13

Conread position: 207-515
Cow position: chr21:22464596-22464285 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 139

Conread position: 208-391
Cow position: chr21:7814906-7815091 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 72

Conread position: 208-393
Cow position: chr21:46777168-46777348 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 208-411
Cow position: chr21:937856-937655 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 189, 19

Conread position: 208-465
Cow position: chr21:297524-297270 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 190, 29

Conread position: 208-470
Cow position: chr21:46912349-46912085 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 108

Conread position: 208-506
Cow position: chr21:4080159-4079864 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 137

Conread position: 208-577
Cow position: chr21:22856024-22855657 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 88

Conread position: 208-583
Cow position: chr21:8125991-8126353 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 26

Conread position: 208-583
Cow position: chr21:24130886-24130525 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 58

Conread position: 208-583
Cow position: chr21:36163158-36163531 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 120

Conread position: 208-583
Cow position: chr21:38900578-38900203 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 56

Conread position: 208-584
Cow position: chr21:12366192-12365809 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 137

Conread position: 208-593
Cow position: chr21:363460-363068 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 135

Conread position: 209-583
Cow position: chr21:45263217-45263586 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 210-552
Cow position: chr21:32113-31770 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 210-583
Cow position: chr21:28477428-28477053 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 129

Conread position: 210-583
Cow position: chr21:32297697-32298078 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 137

Conread position: 212-387
Cow position: chr21:9416043-9415874 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 56

Conread position: 212-583
Cow position: chr21:28810449-28810826 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 16

Conread position: 212-587
Cow position: chr21:48262934-48262563 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 18

Conread position: 217-475
Cow position: chr21:10514608-10514349 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 173, 122

Conread position: 219-583
Cow position: chr21:28617396-28617037 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 127

Conread position: 220-575
Cow position: chr21:26829442-26829798 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 119

Conread position: 221-396
Cow position: chr21:18494767-18494602 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 221-423
Cow position: chr21:9980901-9981099 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 169, 57

Conread position: 222-461
Cow position: chr21:8420456-8420220 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 174, 85

Conread position: 222-500
Cow position: chr21:36756405-36756119 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 29

Conread position: 223-582
Cow position: chr21:34254492-34254850 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 17

Conread position: 224-516
Cow position: chr21:47823478-47823777 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 224-583
Cow position: chr21:2367129-2366776 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 82

Conread position: 226-397
Cow position: chr21:28909916-28910081 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 226-583
Cow position: chr21:4585562-4585919 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 115

Conread position: 226-583
Cow position: chr21:5595451-5595094 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 113

Conread position: 226-583
Cow position: chr21:33579977-33579620 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 90

Conread position: 229-588
Cow position: chr21:35389037-35389393 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 99, 240

Conread position: 241-584
Cow position: chr21:28026898-28026562 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 100

Conread position: 257-592
Cow position: chr21:21907823-21908162 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 82

Conread position: 260-583
Cow position: chr21:29015406-29015712 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 131, 83

Conread position: 269-583
Cow position: chr21:3585832-3586142 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 57

Conread position: 280-544
Cow position: chr21:14383947-14383683 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 52, 152

Conread position: 284-475
Cow position: chr21:29955519-29955712 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 55

Conread position: 297-500
Cow position: chr21:48196615-48196420 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 50

Conread position: 312-524
Cow position: chr21:3381557-3381770 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 27

Conread position: 349-494
Cow position: chr21:2537180-2537332 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 349-497
Cow position: chr21:33620431-33620274 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 351-586
Cow position: chr21:18285796-18285560 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 76

Show alignments to all cow chromosomes.