Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-147
Cow position: chr23:5723466-5723323 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 50

Conread position: 1-387
Cow position: chr23:4579112-4579469 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 10, 57

Conread position: 1-557
Cow position: chr23:39775651-39775102 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 66

Conread position: 2-129
Cow position: chr23:16631190-16631062 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 20

Conread position: 2-129
Cow position: chr23:30656254-30656377 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 46

Conread position: 2-134
Cow position: chr23:39309194-39309322 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 55

Conread position: 2-136
Cow position: chr23:1776709-1776840 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-136
Cow position: chr23:22399325-22399192 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 2-138
Cow position: chr23:33940235-33940366 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-139
Cow position: chr23:18296729-18296595 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 70

Conread position: 2-140
Cow position: chr23:4523055-4523192 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 71

Conread position: 2-142
Cow position: chr23:29345836-29345975 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 53

Conread position: 2-142
Cow position: chr23:29459170-29459304 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 2-143
Cow position: chr23:1923916-1924052 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 2-143
Cow position: chr23:3247505-3247372 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-144
Cow position: chr23:1398114-1398255 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 61

Conread position: 2-144
Cow position: chr23:3262575-3262716 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 72

Conread position: 2-144
Cow position: chr23:4528962-4529109 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 97

Conread position: 2-144
Cow position: chr23:8293425-8293284 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 47

Conread position: 2-144
Cow position: chr23:9268513-9268372 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 2-144
Cow position: chr23:11045406-11045267 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 2-144
Cow position: chr23:20744671-20744806 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-144
Cow position: chr23:38854816-38854951 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 2-144
Cow position: chr23:40781246-40781109 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 2-145
Cow position: chr23:1068392-1068531 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 66

Conread position: 2-145
Cow position: chr23:18322495-18322638 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 72

Conread position: 2-145
Cow position: chr23:24867226-24867084 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 2-145
Cow position: chr23:37065763-37065619 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 73

Conread position: 2-146
Cow position: chr23:187098-186952 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 70

Conread position: 2-146
Cow position: chr23:344254-344397 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr23:534148-534010 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 2-146
Cow position: chr23:1321279-1321413 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 2-146
Cow position: chr23:1536246-1536108 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 55

Conread position: 2-146
Cow position: chr23:1690712-1690569 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr23:1883314-1883174 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 2-146
Cow position: chr23:1885251-1885395 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 72

Conread position: 2-146
Cow position: chr23:2259675-2259819 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 72

Conread position: 2-146
Cow position: chr23:3208699-3208838 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 2-146
Cow position: chr23:3727475-3727621 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 74

Conread position: 2-146
Cow position: chr23:4810674-4810531 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 69

Conread position: 2-146
Cow position: chr23:4980625-4980763 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 2-146
Cow position: chr23:6367526-6367386 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 31

Conread position: 2-146
Cow position: chr23:6767811-6767671 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 2-146
Cow position: chr23:7402622-7402487 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 2-146
Cow position: chr23:7596411-7596550 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 64

Conread position: 2-146
Cow position: chr23:9734335-9734195 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 66

Conread position: 2-146
Cow position: chr23:10554088-10554231 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 122
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 2-146
Cow position: chr23:10852972-10852833 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 63

Conread position: 2-146
Cow position: chr23:13520371-13520238 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 62

Conread position: 2-146
Cow position: chr23:13599265-13599122 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr23:14739368-14739229 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 2-146
Cow position: chr23:15056722-15056861 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 2-146
Cow position: chr23:15287209-15287353 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 72

Conread position: 2-146
Cow position: chr23:15710152-15710297 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 71

Conread position: 2-146
Cow position: chr23:16690134-16690281 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 73

Conread position: 2-146
Cow position: chr23:16700118-16700258 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 69

Conread position: 2-146
Cow position: chr23:18802351-18802492 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 72

Conread position: 2-146
Cow position: chr23:19979026-19979166 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 16

Conread position: 2-146
Cow position: chr23:20056946-20057086 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 2-146
Cow position: chr23:22530494-22530637 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr23:24509622-24509483 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr23:25378575-25378436 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 65

Conread position: 2-146
Cow position: chr23:26632723-26632580 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr23:27544749-27544613 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 2-146
Cow position: chr23:31601531-31601677 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 74

Conread position: 2-146
Cow position: chr23:33601607-33601743 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 62

Conread position: 2-146
Cow position: chr23:37992911-37992770 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 53

Conread position: 2-146
Cow position: chr23:39753038-39752895 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr23:40778187-40778043 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 72

Conread position: 2-146
Cow position: chr23:41348724-41348868 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 72

Conread position: 2-149
Cow position: chr23:38455261-38455407 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 71

Conread position: 2-169
Cow position: chr23:10014459-10014289 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 117, 70

Conread position: 2-197
Cow position: chr23:33711682-33711487 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 135, 54

Conread position: 2-210
Cow position: chr23:29242871-29242667 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 71

Conread position: 2-218
Cow position: chr23:29034237-29034005 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 142, 70

Conread position: 2-278
Cow position: chr23:16881242-16881508 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 167, 58

Conread position: 2-286
Cow position: chr23:38208646-38208354 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 181

Conread position: 2-295
Cow position: chr23:5162348-5162083 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 65

Conread position: 2-309
Cow position: chr23:5617498-5617190 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 67

Conread position: 2-321
Cow position: chr23:14164481-14164773 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 2-335
Cow position: chr23:27862253-27861957 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 67

Conread position: 2-348
Cow position: chr23:21336566-21336888 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 68

Conread position: 2-351
Cow position: chr23:11380332-11380678 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 182

Conread position: 2-365
Cow position: chr23:11434338-11434682 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 9, 69

Conread position: 2-370
Cow position: chr23:2501933-2502277 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 2-378
Cow position: chr23:32961445-32961805 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 2-380
Cow position: chr23:41220300-41220674 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 255
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 70

Conread position: 2-396
Cow position: chr23:18698103-18698469 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 2-399
Cow position: chr23:36199211-36198803 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 30

Conread position: 2-420
Cow position: chr23:35926513-35926128 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 298
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 55

Conread position: 2-446
Cow position: chr23:26986351-26986776 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 71

Conread position: 2-458
Cow position: chr23:4338683-4339125 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 146, 70

Conread position: 2-476
Cow position: chr23:1721064-1721528 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 60

Conread position: 2-478
Cow position: chr23:3140784-3140303 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 314
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 167, 16

Conread position: 2-541
Cow position: chr23:18367614-18367099 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 27

Conread position: 2-579
Cow position: chr23:4608461-4609024 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 2-580
Cow position: chr23:36309341-36308786 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 65

Conread position: 2-582
Cow position: chr23:17404759-17404186 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 65

Conread position: 2-582
Cow position: chr23:22804646-22804096 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 85

Conread position: 2-583
Cow position: chr23:1337380-1337912 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 72

Conread position: 2-583
Cow position: chr23:6592779-6593350 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 66

Conread position: 2-583
Cow position: chr23:7845213-7844658 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 2-583
Cow position: chr23:21343330-21343938 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 25

Conread position: 2-584
Cow position: chr23:5870259-5870831 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 68

Conread position: 3-126
Cow position: chr23:1188979-1189101 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 66

Conread position: 3-140
Cow position: chr23:40648806-40648941 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 3-141
Cow position: chr23:2457385-2457248 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-143
Cow position: chr23:8698367-8698227 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 70

Conread position: 3-145
Cow position: chr23:27563787-27563927 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 67

Conread position: 3-146
Cow position: chr23:1605596-1605460 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 3-146
Cow position: chr23:2179723-2179866 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 60

Conread position: 3-146
Cow position: chr23:2470511-2470365 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 85

Conread position: 3-146
Cow position: chr23:5395503-5395644 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 3-146
Cow position: chr23:5706919-5706781 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 3-146
Cow position: chr23:7175544-7175401 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 69

Conread position: 3-147
Cow position: chr23:4504750-4504607 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 3-343
Cow position: chr23:29742303-29741961 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 29

Conread position: 3-397
Cow position: chr23:16664647-16665008 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 159, 68

Conread position: 3-466
Cow position: chr23:36128980-36129416 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 65

Conread position: 3-581
Cow position: chr23:645252-644681 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 60

Conread position: 4-124
Cow position: chr23:19371152-19371268 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 60

Conread position: 4-144
Cow position: chr23:24704200-24704062 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 52

Conread position: 4-146
Cow position: chr23:2055624-2055483 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 82

Conread position: 4-471
Cow position: chr23:1429876-1430321 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 63

Conread position: 4-522
Cow position: chr23:20435134-20435636 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 63

Conread position: 5-146
Cow position: chr23:1605147-1605004 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 71

Conread position: 5-146
Cow position: chr23:28118182-28118322 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 71

Conread position: 5-354
Cow position: chr23:3394576-3394910 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 67

Conread position: 7-145
Cow position: chr23:25864772-25864902 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 7-455
Cow position: chr23:39573377-39573799 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 304
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 190, 57

Conread position: 7-583
Cow position: chr23:11129153-11128589 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 52

Conread position: 8-144
Cow position: chr23:41472529-41472392 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 75

Conread position: 8-146
Cow position: chr23:13511650-13511514 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 10-398
Cow position: chr23:32650156-32650516 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 51

Conread position: 14-145
Cow position: chr23:7937636-7937758 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 15-146
Cow position: chr23:14895889-14896023 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 62

Conread position: 15-262
Cow position: chr23:1610762-1610531 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 15-370
Cow position: chr23:8063463-8063113 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 204, 43

Conread position: 16-146
Cow position: chr23:670530-670401 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 16-146
Cow position: chr23:1877965-1878090 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 16-170
Cow position: chr23:40502601-40502762 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 60

Conread position: 32-583
Cow position: chr23:20026060-20025511 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 47

Conread position: 34-584
Cow position: chr23:11813737-11814285 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 38

Conread position: 35-397
Cow position: chr23:5151879-5151538 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 271, 38

Conread position: 35-583
Cow position: chr23:11209898-11209363 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 46-543
Cow position: chr23:2802405-2802886 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 33

Conread position: 112-327
Cow position: chr23:2269477-2269689 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 34

Conread position: 156-466
Cow position: chr23:26795421-26795734 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 190

Conread position: 191-396
Cow position: chr23:5420750-5420948 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 200-522
Cow position: chr23:33332074-33332399 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 5

Conread position: 202-563
Cow position: chr23:416919-416552 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 206-464
Cow position: chr23:3282642-3282899 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 184, 12

Conread position: 207-457
Cow position: chr23:15710333-15710586 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 132

Conread position: 208-397
Cow position: chr23:221813-221634 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 208-464
Cow position: chr23:406415-406672 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 183, 69

Conread position: 208-465
Cow position: chr23:8959342-8959085 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 131

Conread position: 208-497
Cow position: chr23:18802530-18802822 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 138

Conread position: 208-576
Cow position: chr23:6720533-6720900 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 111

Conread position: 208-583
Cow position: chr23:29447298-29447680 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 139

Conread position: 209-397
Cow position: chr23:27563955-27564135 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 5

Conread position: 209-472
Cow position: chr23:1670659-1670397 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 173, 22

Conread position: 210-393
Cow position: chr23:20744848-20745026 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 0

Conread position: 210-502
Cow position: chr23:3877226-3877520 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 176, 128

Conread position: 210-504
Cow position: chr23:20001817-20001524 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 186, 122

Conread position: 210-583
Cow position: chr23:10852795-10852421 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 14

Conread position: 210-583
Cow position: chr23:26829196-26828825 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 128

Conread position: 210-584
Cow position: chr23:7311613-7311239 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 128

Conread position: 211-397
Cow position: chr23:32309421-32309240 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 211-532
Cow position: chr23:26797949-26798267 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 75

Conread position: 211-586
Cow position: chr23:10014287-10013910 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 13

Conread position: 212-582
Cow position: chr23:1321451-1321817 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 220-583
Cow position: chr23:6223739-6223394 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 31

Conread position: 221-583
Cow position: chr23:25664882-25665242 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 226-432
Cow position: chr23:11473782-11473988 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 168, 45

Conread position: 226-583
Cow position: chr23:1696554-1696189 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 117

Conread position: 247-583
Cow position: chr23:40688932-40688577 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 135, 92

Conread position: 260-583
Cow position: chr23:32937312-32937636 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 260-583
Cow position: chr23:32939973-32940300 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 262-532
Cow position: chr23:15845061-15845331 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 6

Conread position: 277-566
Cow position: chr23:29459399-29459686 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 113, 66

Conread position: 280-512
Cow position: chr23:36715738-36715965 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 54

Conread position: 283-581
Cow position: chr23:7468826-7468525 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 313-583
Cow position: chr23:29446107-29446372 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 34

Conread position: 334-563
Cow position: chr23:2262629-2262863 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 14

Conread position: 349-581
Cow position: chr23:14738724-14738477 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 186

Conread position: 350-583
Cow position: chr23:5721382-5721620 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 110

Show alignments to all cow chromosomes.