Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-141
Cow position: chr24:36554939-36555070 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 32

Conread position: 1-146
Cow position: chr24:814370-814510 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 1-466
Cow position: chr24:33944298-33943860 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 21

Conread position: 1-545
Cow position: chr24:43200381-43200945 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 63

Conread position: 2-134
Cow position: chr24:18695514-18695388 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 55

Conread position: 2-136
Cow position: chr24:19535357-19535483 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 66

Conread position: 2-136
Cow position: chr24:25194163-25194031 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 2-141
Cow position: chr24:20874574-20874436 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 2-142
Cow position: chr24:33723952-33724092 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 37

Conread position: 2-142
Cow position: chr24:39218947-39219088 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 79

Conread position: 2-143
Cow position: chr24:5152131-5151991 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 56

Conread position: 2-143
Cow position: chr24:27052600-27052737 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 52

Conread position: 2-143
Cow position: chr24:42825600-42825740 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position: chr24:2095996-2096132 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 2-144
Cow position: chr24:21522998-21522856 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 63

Conread position: 2-144
Cow position: chr24:24457351-24457491 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 55

Conread position: 2-144
Cow position: chr24:25677932-25677791 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 71

Conread position: 2-144
Cow position: chr24:27207300-27207438 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 64

Conread position: 2-144
Cow position: chr24:27967971-27967837 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 2-144
Cow position: chr24:29782058-29781918 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 2-144
Cow position: chr24:30178129-30177993 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 2-144
Cow position: chr24:32204900-32205037 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 2-144
Cow position: chr24:34742649-34742506 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 50

Conread position: 2-145
Cow position: chr24:211879-211737 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 2-145
Cow position: chr24:27267528-27267391 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 73

Conread position: 2-145
Cow position: chr24:37246317-37246462 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 80

Conread position: 2-146
Cow position: chr24:5754732-5754596 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 2-146
Cow position: chr24:6900721-6900579 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 57

Conread position: 2-146
Cow position: chr24:6957072-6956932 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr24:7913898-7913753 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 79

Conread position: 2-146
Cow position: chr24:14279788-14279643 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 73

Conread position: 2-146
Cow position: chr24:15473255-15473110 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 72

Conread position: 2-146
Cow position: chr24:18025075-18025217 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 30

Conread position: 2-146
Cow position: chr24:18374672-18374529 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr24:18390394-18390534 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 54

Conread position: 2-146
Cow position: chr24:18485103-18485245 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 2-146
Cow position: chr24:18732229-18732368 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 2-146
Cow position: chr24:18741676-18741816 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 63

Conread position: 2-146
Cow position: chr24:19658451-19658303 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 75

Conread position: 2-146
Cow position: chr24:21264614-21264756 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 68

Conread position: 2-146
Cow position: chr24:25320890-25320744 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 73

Conread position: 2-146
Cow position: chr24:27149290-27149152 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 47

Conread position: 2-146
Cow position: chr24:27941115-27941253 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr24:29595916-29596061 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 43

Conread position: 2-146
Cow position: chr24:30314135-30314281 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 86

Conread position: 2-146
Cow position: chr24:34533022-34532878 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 71

Conread position: 2-146
Cow position: chr24:34565019-34564881 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 56

Conread position: 2-146
Cow position: chr24:35073987-35073847 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 50

Conread position: 2-146
Cow position: chr24:38375179-38375039 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 54

Conread position: 2-146
Cow position: chr24:39483371-39483228 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr24:39493189-39493052 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 66

Conread position: 2-146
Cow position: chr24:43635332-43635189 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr24:44041117-44041254 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 64

Conread position: 2-149
Cow position: chr24:15861706-15861849 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 66

Conread position: 2-149
Cow position: chr24:41068167-41068020 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 69

Conread position: 2-167
Cow position: chr24:250676-250849 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 72

Conread position: 2-170
Cow position: chr24:20943061-20942894 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 52

Conread position: 2-180
Cow position: chr24:31324176-31323995 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 70

Conread position: 2-230
Cow position: chr24:35794842-35795069 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 172, 70

Conread position: 2-257
Cow position: chr24:38347579-38347347 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 68

Conread position: 2-266
Cow position: chr24:3430627-3430381 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 2-278
Cow position: chr24:6102723-6102456 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 76

Conread position: 2-278
Cow position: chr24:18734457-18734718 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 72

Conread position: 2-290
Cow position: chr24:18975095-18974795 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 57

Conread position: 2-304
Cow position: chr24:27543582-27543855 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 2-330
Cow position: chr24:43364254-43363958 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 55

Conread position: 2-337
Cow position: chr24:27874496-27874194 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 69

Conread position: 2-370
Cow position: chr24:29673414-29673080 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 55

Conread position: 2-371
Cow position: chr24:7917468-7917809 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 73

Conread position: 2-376
Cow position: chr24:16625594-16625945 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 151

Conread position: 2-392
Cow position: chr24:27810081-27809717 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 47

Conread position: 2-397
Cow position: chr24:18331618-18331218 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 63

Conread position: 2-397
Cow position: chr24:28332377-28332778 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 270
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 175

Conread position: 2-397
Cow position: chr24:30544965-30545352 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 53

Conread position: 2-421
Cow position: chr24:43432687-43432283 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 2-423
Cow position: chr24:39440660-39441056 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 68

Conread position: 2-446
Cow position: chr24:40184520-40184051 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 26

Conread position: 2-471
Cow position: chr24:20024510-20024065 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 328
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 70

Conread position: 2-484
Cow position: chr24:28062846-28062387 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 71

Conread position: 2-500
Cow position: chr24:40130021-40129543 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 2-504
Cow position: chr24:28721785-28721310 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 80

Conread position: 2-515
Cow position: chr24:17363753-17364242 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 61

Conread position: 2-521
Cow position: chr24:32370024-32370515 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 2-523
Cow position: chr24:33098595-33099087 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 67

Conread position: 2-532
Cow position: chr24:11007114-11006605 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 2-543
Cow position: chr24:18970613-18971125 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 2-571
Cow position: chr24:8886810-8886234 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 2-572
Cow position: chr24:5141838-5141305 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 71

Conread position: 2-581
Cow position: chr24:25991266-25991810 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 30

Conread position: 2-581
Cow position: chr24:32758865-32759447 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 2-581
Cow position: chr24:33238648-33239210 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 2-582
Cow position: chr24:32822885-32823463 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 70

Conread position: 2-583
Cow position: chr24:6340910-6340373 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 68

Conread position: 2-583
Cow position: chr24:18266271-18266822 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 2-583
Cow position: chr24:24136962-24137508 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 61

Conread position: 2-583
Cow position: chr24:27906332-27905777 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 14

Conread position: 2-583
Cow position: chr24:31816482-31815900 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 52

Conread position: 2-583
Cow position: chr24:36486163-36486702 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 71

Conread position: 2-583
Cow position: chr24:39259056-39258489 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 14

Conread position: 2-586
Cow position: chr24:6507870-6508470 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 2-590
Cow position: chr24:24250622-24250057 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 54

Conread position: 2-593
Cow position: chr24:2730675-2731213 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 64

Conread position: 3-141
Cow position: chr24:201741-201875 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 3-144
Cow position: chr24:25424956-25424820 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 66

Conread position: 3-146
Cow position: chr24:6487816-6487675 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-146
Cow position: chr24:15246745-15246880 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 3-146
Cow position: chr24:18324515-18324371 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 72

Conread position: 3-146
Cow position: chr24:19769387-19769253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 20

Conread position: 3-146
Cow position: chr24:27844629-27844765 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-146
Cow position: chr24:28303460-28303594 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 3-146
Cow position: chr24:28496690-28496834 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 71

Conread position: 3-146
Cow position: chr24:30229370-30229223 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 72

Conread position: 3-146
Cow position: chr24:40301052-40300910 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 70

Conread position: 3-174
Cow position: chr24:30235766-30235591 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 134, 69

Conread position: 3-275
Cow position: chr24:39350319-39350577 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 67

Conread position: 3-337
Cow position: chr24:2993025-2993342 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 69

Conread position: 3-348
Cow position: chr24:3493785-3493472 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 330, 52

Conread position: 3-370
Cow position: chr24:39607661-39608036 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 128, 11

Conread position: 3-427
Cow position: chr24:24002872-24002475 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 381, 60

Conread position: 3-558
Cow position: chr24:17860362-17860900 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 67

Conread position: 3-581
Cow position: chr24:27633306-27632738 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 3-582
Cow position: chr24:22193624-22193067 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 50

Conread position: 4-146
Cow position: chr24:11887052-11886912 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 4-146
Cow position: chr24:17311319-17311454 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 4-146
Cow position: chr24:18474853-18474993 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 4-146
Cow position: chr24:23556435-23556576 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 4-146
Cow position: chr24:40055829-40055967 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 52

Conread position: 4-569
Cow position: chr24:6154703-6154185 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 388
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 306, 12

Conread position: 4-574
Cow position: chr24:11119177-11118637 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 4-583
Cow position: chr24:11876777-11876222 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 69

Conread position: 5-142
Cow position: chr24:28699949-28699816 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 63

Conread position: 5-146
Cow position: chr24:29679412-29679556 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 74

Conread position: 5-195
Cow position: chr24:34396283-34396465 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 5-275
Cow position: chr24:16268222-16268500 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 91

Conread position: 9-146
Cow position: chr24:19804578-19804442 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 9-149
Cow position: chr24:11840073-11839930 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 9-466
Cow position: chr24:40974887-40974453 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 358, 47

Conread position: 10-453
Cow position: chr24:28553661-28554082 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 307
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 287, 54

Conread position: 13-291
Cow position: chr24:15288743-15288491 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 15-146
Cow position: chr24:37975190-37975316 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 16-581
Cow position: chr24:33621604-33622141 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 57

Conread position: 19-587
Cow position: chr24:37386470-37387026 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 50

Conread position: 21-146
Cow position: chr24:19466055-19466178 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 23-515
Cow position: chr24:16556760-16557245 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 7

Conread position: 24-379
Cow position: chr24:36730372-36730019 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 150, 45

Conread position: 31-146
Cow position: chr24:33372419-33372305 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 35-521
Cow position: chr24:15666545-15667006 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 38

Conread position: 37-218
Cow position: chr24:28143828-28144014 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 30

Conread position: 43-469
Cow position: chr24:27563819-27564254 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 12

Conread position: 144-584
Cow position: chr24:37946057-37946512 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 198-583
Cow position: chr24:29170705-29170331 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 17

Conread position: 200-532
Cow position: chr24:17294657-17294992 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 147

Conread position: 202-542
Cow position: chr24:6450255-6449919 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 137

Conread position: 202-579
Cow position: chr24:15372842-15372463 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 36

Conread position: 205-583
Cow position: chr24:18390872-18391262 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 205-584
Cow position: chr24:25424726-25424349 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 57

Conread position: 207-408
Cow position: chr24:37984628-37984830 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 73

Conread position: 207-583
Cow position: chr24:9087754-9088127 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 138

Conread position: 208-397
Cow position: chr24:38655375-38655563 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 137, 0

Conread position: 208-470
Cow position: chr24:13819658-13819392 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 164, 133

Conread position: 208-475
Cow position: chr24:27052775-27053040 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 27

Conread position: 208-571
Cow position: chr24:32693421-32693058 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 16

Conread position: 208-581
Cow position: chr24:37037334-37036956 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 137

Conread position: 208-584
Cow position: chr24:6141239-6141611 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 131

Conread position: 209-432
Cow position: chr24:27720036-27720255 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 181, 20

Conread position: 209-473
Cow position: chr24:16897124-16897395 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 108

Conread position: 209-581
Cow position: chr24:4616030-4616404 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 139

Conread position: 210-397
Cow position: chr24:27889192-27889374 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 210-447
Cow position: chr24:43506798-43507033 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 115

Conread position: 210-479
Cow position: chr24:27844805-27845076 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 189, 136

Conread position: 210-504
Cow position: chr24:40056003-40056301 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 16

Conread position: 210-507
Cow position: chr24:18741856-18742141 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 101, 36

Conread position: 210-507
Cow position: chr24:39219131-39219417 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 106, 0

Conread position: 210-583
Cow position: chr24:17407108-17406742 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 18

Conread position: 210-583
Cow position: chr24:38814688-38814313 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 14

Conread position: 210-593
Cow position: chr24:16610735-16611119 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 136

Conread position: 212-453
Cow position: chr24:7001356-7001597 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 177, 96

Conread position: 212-583
Cow position: chr24:41063504-41063128 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 9

Conread position: 214-502
Cow position: chr24:28601020-28601306 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 125

Conread position: 217-423
Cow position: chr24:40206551-40206344 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 99

Conread position: 221-574
Cow position: chr24:17833740-17834095 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 34

Conread position: 232-482
Cow position: chr24:40771811-40771559 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 157, 70

Conread position: 251-470
Cow position: chr24:34396467-34396687 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 11

Conread position: 261-582
Cow position: chr24:14375666-14375989 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 91

Conread position: 268-456
Cow position: chr24:16400259-16400448 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 122

Conread position: 268-581
Cow position: chr24:16268575-16268895 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 146

Conread position: 268-583
Cow position: chr24:17752265-17752578 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 56

Conread position: 275-594
Cow position: chr24:25543232-25543548 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 280-439
Cow position: chr24:20225223-20225383 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 66

Conread position: 298-569
Cow position: chr24:24496220-24495940 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 126

Conread position: 349-523
Cow position: chr24:28497243-28497423 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 349-583
Cow position: chr24:5910732-5910490 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 40, 227

Conread position: 349-583
Cow position: chr24:45010095-45009855 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 148

Conread position: 350-583
Cow position: chr24:8418221-8417991 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 116, 43

Show alignments to all cow chromosomes.