Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-146
Cow position: chr25:13642394-13642539 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 68

Conread position: 1-146
Cow position: chr25:30279287-30279430 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 51

Conread position: 1-464
Cow position: chr25:24167984-24168446 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 55

Conread position: 2-112
Cow position: chr25:18905802-18905692 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 71

Conread position: 2-116
Cow position: chr25:13672310-13672195 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 72

Conread position: 2-116
Cow position: chr25:35110209-35110323 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 71

Conread position: 2-119
Cow position: chr25:12755574-12755687 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 55

Conread position: 2-121
Cow position: chr25:448428-448543 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 57

Conread position: 2-127
Cow position: chr25:17704670-17704545 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 79

Conread position: 2-133
Cow position: chr25:36779413-36779282 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 71

Conread position: 2-141
Cow position: chr25:20060110-20060250 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 69

Conread position: 2-142
Cow position: chr25:9396367-9396231 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 14

Conread position: 2-142
Cow position: chr25:12899673-12899536 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 2-142
Cow position: chr25:31732817-31732955 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 2-142
Cow position: chr25:40957071-40957206 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 58

Conread position: 2-143
Cow position: chr25:21266926-21266786 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 27

Conread position: 2-144
Cow position: chr25:7329464-7329323 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position: chr25:10218131-10218272 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 68

Conread position: 2-144
Cow position: chr25:10365834-10365973 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 65

Conread position: 2-144
Cow position: chr25:12097758-12097621 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 2-144
Cow position: chr25:18448756-18448616 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-145
Cow position: chr25:6474180-6474321 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 2-145
Cow position: chr25:17566504-17566365 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 68

Conread position: 2-146
Cow position: chr25:61577-61434 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 67

Conread position: 2-146
Cow position: chr25:1735397-1735539 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 2-146
Cow position: chr25:1838154-1838017 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 66

Conread position: 2-146
Cow position: chr25:2110993-2110860 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 2-146
Cow position: chr25:2596102-2595954 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 2-146
Cow position: chr25:5514927-5514783 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 72

Conread position: 2-146
Cow position: chr25:6256020-6256161 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 66

Conread position: 2-146
Cow position: chr25:7306218-7306075 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr25:8120697-8120553 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 72

Conread position: 2-146
Cow position: chr25:12817292-12817149 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 22

Conread position: 2-146
Cow position: chr25:14196776-14196633 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr25:14791670-14791529 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr25:15254417-15254554 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 2-146
Cow position: chr25:16001608-16001743 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 2-146
Cow position: chr25:16921875-16922017 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 2-146
Cow position: chr25:17712453-17712311 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 44

Conread position: 2-146
Cow position: chr25:18075591-18075446 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 74

Conread position: 2-146
Cow position: chr25:18988298-18988153 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 73

Conread position: 2-146
Cow position: chr25:19129769-19129631 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr25:19679260-19679119 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 2-146
Cow position: chr25:20461043-20460900 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr25:20785669-20785807 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 2-146
Cow position: chr25:21289263-21289117 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 74

Conread position: 2-146
Cow position: chr25:21894970-21895109 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 2-146
Cow position: chr25:22203768-22203913 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 71

Conread position: 2-146
Cow position: chr25:22297102-22297240 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 2-146
Cow position: chr25:24669520-24669654 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 2-146
Cow position: chr25:25051464-25051607 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 62

Conread position: 2-146
Cow position: chr25:25754080-25754220 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 2-146
Cow position: chr25:26087437-26087292 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 30, 73

Conread position: 2-146
Cow position: chr25:26654826-26654683 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 62

Conread position: 2-146
Cow position: chr25:26700953-26700815 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 2-146
Cow position: chr25:30319527-30319672 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 76

Conread position: 2-146
Cow position: chr25:33691474-33691330 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 72

Conread position: 2-146
Cow position: chr25:35347824-35347681 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr25:36026925-36026784 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 54

Conread position: 2-146
Cow position: chr25:36081793-36081650 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 69, 83

Conread position: 2-146
Cow position: chr25:36535520-36535658 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 67

Conread position: 2-146
Cow position: chr25:36762023-36761883 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 62

Conread position: 2-147
Cow position: chr25:16389374-16389515 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 72

Conread position: 2-147
Cow position: chr25:33550424-33550281 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 2-148
Cow position: chr25:16867146-16867003 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 31

Conread position: 2-149
Cow position: chr25:14513027-14512890 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 2-153
Cow position: chr25:17975451-17975597 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 2-170
Cow position: chr25:12239231-12239400 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 11, 71

Conread position: 2-180
Cow position: chr25:25827385-25827194 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 74

Conread position: 2-212
Cow position: chr25:40407554-40407772 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 64

Conread position: 2-215
Cow position: chr25:35333075-35332867 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 30, 71

Conread position: 2-216
Cow position: chr25:9754172-9754384 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 70

Conread position: 2-217
Cow position: chr25:35625261-35625477 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 133, 18

Conread position: 2-267
Cow position: chr25:35344947-35344686 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 28

Conread position: 2-270
Cow position: chr25:5837049-5837306 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 2-278
Cow position: chr25:36036864-36037121 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 2-289
Cow position: chr25:21245687-21245948 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 69

Conread position: 2-290
Cow position: chr25:6961238-6961520 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 200, 46

Conread position: 2-293
Cow position: chr25:11131497-11131208 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 144, 67

Conread position: 2-318
Cow position: chr25:4002717-4002404 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 52

Conread position: 2-322
Cow position: chr25:8226017-8225709 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 144, 70

Conread position: 2-338
Cow position: chr25:7801055-7800745 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 2-345
Cow position: chr25:7216747-7216423 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 70

Conread position: 2-354
Cow position: chr25:26938313-26938667 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 94, 9

Conread position: 2-370
Cow position: chr25:20008051-20007698 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 53

Conread position: 2-389
Cow position: chr25:22531201-22530851 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 51

Conread position: 2-397
Cow position: chr25:20402796-20403164 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 68

Conread position: 2-419
Cow position: chr25:5791883-5792275 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 75

Conread position: 2-420
Cow position: chr25:12824103-12824503 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 2-496
Cow position: chr25:26238787-26238323 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 70

Conread position: 2-497
Cow position: chr25:18310721-18310223 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 2-512
Cow position: chr25:14833742-14834228 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 54

Conread position: 2-518
Cow position: chr25:20395108-20394626 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 349
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 269, 18

Conread position: 2-528
Cow position: chr25:35607805-35608302 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 68

Conread position: 2-533
Cow position: chr25:28188030-28188569 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 2-540
Cow position: chr25:24405819-24406370 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 71

Conread position: 2-545
Cow position: chr25:12204386-12203869 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 66

Conread position: 2-575
Cow position: chr25:33839296-33838749 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 2-582
Cow position: chr25:21951044-21950497 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 70

Conread position: 2-583
Cow position: chr25:11585433-11584878 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 31

Conread position: 2-583
Cow position: chr25:12081404-12081989 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 68

Conread position: 3-131
Cow position: chr25:26270018-26270142 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 64

Conread position: 3-145
Cow position: chr25:10138012-10137876 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position: chr25:788180-788046 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-146
Cow position: chr25:7007830-7007693 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 3-146
Cow position: chr25:7581509-7581651 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 63

Conread position: 3-146
Cow position: chr25:8918356-8918501 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 69

Conread position: 3-146
Cow position: chr25:12778613-12778755 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position: chr25:17658529-17658391 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 65

Conread position: 3-146
Cow position: chr25:20023474-20023616 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position: chr25:21209029-21209171 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position: chr25:33256284-33256145 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 61

Conread position: 3-146
Cow position: chr25:34169869-34169731 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 3-397
Cow position: chr25:10010803-10011164 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 3-573
Cow position: chr25:10407498-10408051 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 4-146
Cow position: chr25:15319834-15319697 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 4-146
Cow position: chr25:20348776-20348635 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 71

Conread position: 4-396
Cow position: chr25:9642270-9641900 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 5-146
Cow position: chr25:15377241-15377110 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 5-146
Cow position: chr25:18294401-18294536 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 53

Conread position: 5-149
Cow position: chr25:19478604-19478462 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 6-237
Cow position: chr25:24452255-24452493 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 62

Conread position: 6-301
Cow position: chr25:34669159-34668861 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 35

Conread position: 7-145
Cow position: chr25:433162-433302 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 9-474
Cow position: chr25:6891615-6892054 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 59

Conread position: 10-288
Cow position: chr25:6238040-6237748 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 37

Conread position: 10-310
Cow position: chr25:14266595-14266890 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 194, 55

Conread position: 10-439
Cow position: chr25:38135655-38135230 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 62

Conread position: 12-145
Cow position: chr25:9842910-9842779 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 13-145
Cow position: chr25:36557595-36557464 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 14-145
Cow position: chr25:21193036-21193166 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 19-180
Cow position: chr25:10330500-10330665 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 127, 9

Conread position: 23-146
Cow position: chr25:16319235-16319355 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 32-500
Cow position: chr25:9625699-9625263 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 305
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 48

Conread position: 33-297
Cow position: chr25:40321404-40321658 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 242, 46

Conread position: 43-366
Cow position: chr25:16691395-16691087 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 102, 30

Conread position: 69-324
Cow position: chr25:2517399-2517151 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 74-583
Cow position: chr25:37594263-37593771 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 127

Conread position: 79-506
Cow position: chr25:13443756-13444186 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 76

Conread position: 86-350
Cow position: chr25:38403103-38402830 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 103

Conread position: 168-406
Cow position: chr25:15254805-15255046 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 70

Conread position: 168-575
Cow position: chr25:12220045-12219636 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 70

Conread position: 191-515
Cow position: chr25:23829356-23829684 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 69

Conread position: 206-583
Cow position: chr25:18072943-18072587 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 12

Conread position: 207-386
Cow position: chr25:7329095-7328919 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 138

Conread position: 208-387
Cow position: chr25:11830157-11830330 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 61

Conread position: 208-475
Cow position: chr25:26112021-26111755 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 106

Conread position: 208-487
Cow position: chr25:21041559-21041279 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 54

Conread position: 208-578
Cow position: chr25:18181853-18181491 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 88

Conread position: 208-581
Cow position: chr25:11540852-11540493 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 136

Conread position: 208-583
Cow position: chr25:4522078-4522446 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 135

Conread position: 208-583
Cow position: chr25:13333162-13332781 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 94

Conread position: 208-583
Cow position: chr25:17658354-17657980 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 137

Conread position: 210-351
Cow position: chr25:18935272-18935413 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 133, 92

Conread position: 210-397
Cow position: chr25:14225058-14225247 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 210-397
Cow position: chr25:21191226-21191044 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 210-583
Cow position: chr25:14569170-14568808 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 128

Conread position: 210-583
Cow position: chr25:34659367-34659733 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 128

Conread position: 211-583
Cow position: chr25:11054664-11054306 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 37

Conread position: 212-391
Cow position: chr25:1735575-1735755 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 0

Conread position: 212-456
Cow position: chr25:36779231-36778989 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 179, 131

Conread position: 212-476
Cow position: chr25:22730383-22730134 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 212-519
Cow position: chr25:33256108-33255814 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 8

Conread position: 218-480
Cow position: chr25:9268897-9268633 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 115, 14

Conread position: 219-399
Cow position: chr25:38972561-38972387 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 219-496
Cow position: chr25:599059-598783 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 171, 13

Conread position: 221-583
Cow position: chr25:25510621-25510257 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 117

Conread position: 222-444
Cow position: chr25:33091248-33091470 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 84

Conread position: 222-581
Cow position: chr25:2136084-2135729 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 24

Conread position: 223-506
Cow position: chr25:25754271-25754558 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 125

Conread position: 226-563
Cow position: chr25:24779319-24778984 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 226-583
Cow position: chr25:17562790-17562431 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 36

Conread position: 229-522
Cow position: chr25:4488454-4488161 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 114

Conread position: 229-583
Cow position: chr25:11666385-11666030 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 79

Conread position: 248-571
Cow position: chr25:5824167-5823841 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 97

Conread position: 257-583
Cow position: chr25:19367001-19367331 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 88

Conread position: 259-583
Cow position: chr25:20785840-20786167 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 298-578
Cow position: chr25:2516948-2516670 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 47

Conread position: 300-581
Cow position: chr25:23914594-23914299 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 249

Conread position: 305-583
Cow position: chr25:24669716-24669996 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 40

Conread position: 349-525
Cow position: chr25:33687376-33687554 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 41

Conread position: 349-583
Cow position: chr25:10137433-10137190 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.