Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-118
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 65

Conread position: 1-144
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 76

Conread position: 1-583
Cow position:
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 2-107
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 2-124
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 66

Conread position: 2-125
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 56

Conread position: 2-129
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 71

Conread position: 2-134
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 76

Conread position: 2-135
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 80

Conread position: 2-136
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 2-136
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 2-137
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-139
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 66

Conread position: 2-140
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 2-141
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 2-141
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 71

Conread position: 2-141
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 70

Conread position: 2-142
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 65

Conread position: 2-142
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 37

Conread position: 2-142
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 70

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 70

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 2-144
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 67

Conread position: 2-145
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 77

Conread position: 2-145
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 2-145
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 56

Conread position: 2-145
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 64

Conread position: 2-145
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 63

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 9

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 129

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 84

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 74

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 67

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 75

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 56

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 55

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 62

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 26

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 71

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 2-146
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 77

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 2-146
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 76

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 71

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 70

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 64

Conread position: 2-146
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 75

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 75

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 83

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 69

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 62

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 78

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 74

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 54

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 74

Conread position: 2-146
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 76

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 71

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 70

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 69

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 74

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 81

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 66

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 55

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 66

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 72

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 67

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 66

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 68

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-146
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 83

Conread position: 2-146
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 22

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 74

Conread position: 2-146
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 48

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 68

Conread position: 2-146
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 72

Conread position: 2-146
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-147
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 2-147
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 69

Conread position: 2-147
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 15

Conread position: 2-147
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 2-147
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 65

Conread position: 2-149
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 72

Conread position: 2-149
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 26

Conread position: 2-166
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 70

Conread position: 2-197
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 55

Conread position: 2-215
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 67

Conread position: 2-215
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 52

Conread position: 2-218
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 71

Conread position: 2-229
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 44

Conread position: 2-264
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 73

Conread position: 2-270
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 55

Conread position: 2-271
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 71

Conread position: 2-274
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 64

Conread position: 2-275
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 175, 44

Conread position: 2-288
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 5

Conread position: 2-296
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 18

Conread position: 2-303
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 58

Conread position: 2-303
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 69

Conread position: 2-308
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 14

Conread position: 2-309
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 56

Conread position: 2-323
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 71

Conread position: 2-324
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 75

Conread position: 2-326
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 2-338
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 146, 72

Conread position: 2-343
Cow position:
Alignm length: 358
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 144, 71

Conread position: 2-369
Cow position:
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 53

Conread position: 2-370
Cow position:
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 2-370
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 144, 10

Conread position: 2-389
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 26

Conread position: 2-396
Cow position:
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 46

Conread position: 2-397
Cow position:
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 54

Conread position: 2-401
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 14

Conread position: 2-402
Cow position:
Alignm length: 407
Alignm identity: 272
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 329, 71

Conread position: 2-409
Cow position:
Alignm length: 418
Alignm identity: 283
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 68

Conread position: 2-427
Cow position:
Alignm length: 434
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 104

Conread position: 2-445
Cow position:
Alignm length: 448
Alignm identity: 304
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 308, 71

Conread position: 2-448
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 60

Conread position: 2-452
Cow position:
Alignm length: 472
Alignm identity: 310
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 65

Conread position: 2-456
Cow position:
Alignm length: 458
Alignm identity: 309
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 309, 54

Conread position: 2-464
Cow position:
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 2-472
Cow position:
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 56

Conread position: 2-485
Cow position:
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 48

Conread position: 2-509
Cow position:
Alignm length: 525
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 2-518
Cow position:
Alignm length: 523
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 60

Conread position: 2-521
Cow position:
Alignm length: 525
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 63

Conread position: 2-533
Cow position:
Alignm length: 539
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 70

Conread position: 2-558
Cow position:
Alignm length: 566
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 2-575
Cow position:
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 2-579
Cow position:
Alignm length: 582
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 70

Conread position: 2-583
Cow position:
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 65

Conread position: 2-583
Cow position:
Alignm length: 600
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 2-583
Cow position:
Alignm length: 601
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 70

Conread position: 2-583
Cow position:
Alignm length: 589
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 67

Conread position: 2-583
Cow position:
Alignm length: 591
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 2-583
Cow position:
Alignm length: 587
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 71

Conread position: 2-584
Cow position:
Alignm length: 599
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 30

Conread position: 2-584
Cow position:
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 2-584
Cow position:
Alignm length: 599
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 2-587
Cow position:
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 55

Conread position: 2-594
Cow position:
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 65

Conread position: 2-598
Cow position:
Alignm length: 605
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 3-127
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 3-146
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 77

Conread position: 3-146
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 16

Conread position: 3-146
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 71

Conread position: 3-146
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 42

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 11

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 3-146
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 54

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 79

Conread position: 3-149
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 83

Conread position: 3-166
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 70

Conread position: 3-338
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 192, 53

Conread position: 3-347
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 252, 9

Conread position: 3-387
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 69

Conread position: 3-423
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 14

Conread position: 3-434
Cow position:
Alignm length: 444
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 81

Conread position: 3-506
Cow position:
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-581
Cow position:
Alignm length: 604
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 3-581
Cow position:
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 4-146
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 4-146
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 47

Conread position: 4-146
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 4-146
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 64

Conread position: 4-218
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 70

Conread position: 4-349
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 64

Conread position: 5-146
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 71

Conread position: 5-146
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 27, 64

Conread position: 5-147
Cow position:
Alignm length: 143
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 5-323
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 5-347
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 139, 62

Conread position: 5-397
Cow position:
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 66

Conread position: 7-144
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 59

Conread position: 7-146
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 7-485
Cow position:
Alignm length: 490
Alignm identity: 321
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 390, 64

Conread position: 8-144
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 60

Conread position: 8-397
Cow position:
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 56

Conread position: 8-583
Cow position:
Alignm length: 587
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 15-257
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 156, 58

Conread position: 15-563
Cow position:
Alignm length: 566
Alignm identity: 350
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 130, 18

Conread position: 15-583
Cow position:
Alignm length: 575
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 58

Conread position: 16-218
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 39

Conread position: 16-218
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 39

Conread position: 16-364
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 25

Conread position: 16-370
Cow position:
Alignm length: 362
Alignm identity: 246
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 132, 57

Conread position: 17-146
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 18-146
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 20-271
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 144, 31

Conread position: 20-571
Cow position:
Alignm length: 571
Alignm identity: 364
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 46

Conread position: 20-581
Cow position:
Alignm length: 576
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 25

Conread position: 20-583
Cow position:
Alignm length: 567
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 34

Conread position: 22-497
Cow position:
Alignm length: 485
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 205, 51

Conread position: 24-581
Cow position:
Alignm length: 561
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 63

Conread position: 25-583
Cow position:
Alignm length: 578
Alignm identity: 376
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 11, 31

Conread position: 32-583
Cow position:
Alignm length: 563
Alignm identity: 364
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 178, 41

Conread position: 57-380
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 57-522
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 7

Conread position: 61-427
Cow position:
Alignm length: 371
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 230, 36

Conread position: 63-311
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 120

Conread position: 68-380
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 16

Conread position: 71-532
Cow position:
Alignm length: 471
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 115

Conread position: 73-513
Cow position:
Alignm length: 469
Alignm identity: 308
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 105, 73

Conread position: 77-370
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 34

Conread position: 95-387
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 202

Conread position: 168-583
Cow position:
Alignm length: 423
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 140

Conread position: 169-465
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 162

Conread position: 174-572
Cow position:
Alignm length: 402
Alignm identity: 260
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 31, 42

Conread position: 178-506
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 212, 104

Conread position: 179-583
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Conread position: 198-504
Cow position:
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 199-503
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 10

Conread position: 201-586
Cow position:
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 9

Conread position: 203-431
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 14, 141

Conread position: 207-583
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 208-391
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 208-392
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 208-397
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 0

Conread position: 208-442
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 174, 130

Conread position: 208-459
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 16

Conread position: 208-471
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 182, 137

Conread position: 208-562
Cow position:
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 131

Conread position: 208-568
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 136

Conread position: 208-580
Cow position:
Alignm length: 390
Alignm identity: 262
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 125, 16

Conread position: 208-581
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 376

Conread position: 208-583
Cow position:
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 117

Conread position: 208-583
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 100

Conread position: 209-423
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 131, 142

Conread position: 209-462
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 173, 10

Conread position: 209-548
Cow position:
Alignm length: 348
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 37

Conread position: 210-424
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 210-424
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 210-512
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 9

Conread position: 210-522
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 98

Conread position: 210-580
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 52

Conread position: 210-581
Cow position:
Alignm length: 378
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 129

Conread position: 211-497
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 70

Conread position: 213-397
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 42

Conread position: 213-583
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 27

Conread position: 217-380
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 109

Conread position: 220-473
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 0

Conread position: 221-446
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 11, 119

Conread position: 221-471
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 222-461
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 223-582
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 116

Conread position: 224-583
Cow position:
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 115

Conread position: 225-517
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 164, 38

Conread position: 225-581
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 69

Conread position: 226-583
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 113

Conread position: 248-582
Cow position:
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 66

Conread position: 273-563
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 71

Conread position: 284-582
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 55

Conread position: 293-546
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 178, 47

Conread position: 349-583
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 350-583
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 190

Show alignments to all cow chromosomes.