Cow genome map

Conread name: rpfco0140_i1.y1

Conread position: 1-146
Cow position: chr9:8869033-8868886 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 80

Conread position: 1-146
Cow position: chr9:44914979-44914845 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 67

Conread position: 1-288
Cow position: chr9:44408150-44408441 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 24

Conread position: 1-289
Cow position: chr9:50076167-50076459 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 161

Conread position: 1-530
Cow position: chr9:30138238-30138767 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 55

Conread position: 1-575
Cow position: chr9:8338137-8338699 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 22

Conread position: 1-581
Cow position: chr9:52725111-52724540 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 2-117
Cow position: chr9:28354629-28354739 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 2-125
Cow position: chr9:50667534-50667653 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 64

Conread position: 2-139
Cow position: chr9:6840112-6840254 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 57

Conread position: 2-139
Cow position: chr9:32307126-32306993 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 54

Conread position: 2-141
Cow position: chr9:34957944-34957806 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 2-141
Cow position: chr9:52131128-52131263 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 69

Conread position: 2-142
Cow position: chr9:22616735-22616869 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 2-142
Cow position: chr9:35533842-35533705 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 68

Conread position: 2-142
Cow position: chr9:50139395-50139527 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 25

Conread position: 2-143
Cow position: chr9:3387801-3387937 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 66

Conread position: 2-144
Cow position: chr9:6225343-6225204 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 67

Conread position: 2-144
Cow position: chr9:17871996-17871859 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 57

Conread position: 2-144
Cow position: chr9:31640212-31640070 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 72

Conread position: 2-144
Cow position: chr9:32812455-32812596 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 2-144
Cow position: chr9:47869117-47869255 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 2-144
Cow position: chr9:58204771-58204914 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 37

Conread position: 2-144
Cow position: chr9:59795176-59795032 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 75

Conread position: 2-145
Cow position: chr9:1751448-1751583 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 2-145
Cow position: chr9:5161954-5161817 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 66

Conread position: 2-145
Cow position: chr9:5393159-5393300 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 2-145
Cow position: chr9:5433748-5433884 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 67

Conread position: 2-145
Cow position: chr9:5621924-5621781 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 72

Conread position: 2-145
Cow position: chr9:27077136-27077002 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 2-145
Cow position: chr9:48343712-48343851 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 54

Conread position: 2-145
Cow position: chr9:64050450-64050306 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 59

Conread position: 2-145
Cow position: chr9:64091795-64091937 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 79

Conread position: 2-146
Cow position: chr9:1350336-1350195 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr9:1952158-1952019 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position: chr9:4128673-4128534 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 2-146
Cow position: chr9:4928738-4928881 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr9:5227060-5226914 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 74

Conread position: 2-146
Cow position: chr9:5500968-5501101 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 2-146
Cow position: chr9:5509832-5509974 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 72

Conread position: 2-146
Cow position: chr9:5532058-5532203 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 73

Conread position: 2-146
Cow position: chr9:5594610-5594750 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 55

Conread position: 2-146
Cow position: chr9:6192351-6192209 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 2-146
Cow position: chr9:7409888-7410032 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 57

Conread position: 2-146
Cow position: chr9:8534580-8534433 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 77

Conread position: 2-146
Cow position: chr9:8998467-8998605 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr9:9199669-9199534 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 2-146
Cow position: chr9:9416294-9416157 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 55

Conread position: 2-146
Cow position: chr9:9490901-9491043 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 72

Conread position: 2-146
Cow position: chr9:9516658-9516520 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 2-146
Cow position: chr9:10877761-10877616 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 75

Conread position: 2-146
Cow position: chr9:11193062-11192918 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 79

Conread position: 2-146
Cow position: chr9:14974820-14974676 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 52

Conread position: 2-146
Cow position: chr9:16218540-16218393 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 2-146
Cow position: chr9:17740837-17740694 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 2-146
Cow position: chr9:17928870-17929022 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 2-146
Cow position: chr9:18002841-18002699 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 56

Conread position: 2-146
Cow position: chr9:20406744-20406888 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 72

Conread position: 2-146
Cow position: chr9:20416400-20416259 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 18

Conread position: 2-146
Cow position: chr9:20738812-20738952 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 2-146
Cow position: chr9:20810954-20810811 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 84

Conread position: 2-146
Cow position: chr9:21888277-21888419 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 73

Conread position: 2-146
Cow position: chr9:22114524-22114383 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 2-146
Cow position: chr9:22151972-22151837 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-146
Cow position: chr9:22696331-22696467 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 63

Conread position: 2-146
Cow position: chr9:23431035-23430892 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr9:24726569-24726428 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 69

Conread position: 2-146
Cow position: chr9:24887310-24887450 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-146
Cow position: chr9:26086172-26086317 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 73

Conread position: 2-146
Cow position: chr9:26390878-26391018 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 2-146
Cow position: chr9:26403895-26404039 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 72

Conread position: 2-146
Cow position: chr9:26577746-26577610 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 54

Conread position: 2-146
Cow position: chr9:29185022-29184883 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr9:30664673-30664528 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 26

Conread position: 2-146
Cow position: chr9:30749476-30749335 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 67

Conread position: 2-146
Cow position: chr9:31347066-31347204 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 2-146
Cow position: chr9:31626257-31626399 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 2-146
Cow position: chr9:32371650-32371510 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 129, 54

Conread position: 2-146
Cow position: chr9:32676790-32676936 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 74

Conread position: 2-146
Cow position: chr9:32732578-32732436 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 14

Conread position: 2-146
Cow position: chr9:33598091-33598231 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 66

Conread position: 2-146
Cow position: chr9:33681794-33681934 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 64

Conread position: 2-146
Cow position: chr9:35375538-35375674 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 53

Conread position: 2-146
Cow position: chr9:38875466-38875324 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 66

Conread position: 2-146
Cow position: chr9:41416462-41416601 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 67

Conread position: 2-146
Cow position: chr9:41652896-41653039 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr9:41995820-41995964 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 36, 72

Conread position: 2-146
Cow position: chr9:42497936-42498079 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 69

Conread position: 2-146
Cow position: chr9:44467242-44467099 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr9:51204831-51204975 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-146
Cow position: chr9:52407277-52407420 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 71

Conread position: 2-146
Cow position: chr9:52484810-52484667 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 2-146
Cow position: chr9:54611125-54610981 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 78

Conread position: 2-146
Cow position: chr9:54997917-54997773 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 72

Conread position: 2-146
Cow position: chr9:55084187-55084047 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 69

Conread position: 2-146
Cow position: chr9:55287787-55287641 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 69

Conread position: 2-146
Cow position: chr9:58979508-58979651 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 2-146
Cow position: chr9:59386663-59386527 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 13

Conread position: 2-146
Cow position: chr9:61997489-61997345 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 78

Conread position: 2-146
Cow position: chr9:64516990-64516846 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 73

Conread position: 2-147
Cow position: chr9:8288728-8288868 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 2-147
Cow position: chr9:41283124-41283277 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 94

Conread position: 2-147
Cow position: chr9:64155749-64155605 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 2-149
Cow position: chr9:61544759-61544902 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 48

Conread position: 2-153
Cow position: chr9:52001115-52001264 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 69

Conread position: 2-168
Cow position: chr9:11319523-11319358 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 70

Conread position: 2-170
Cow position: chr9:33823209-33823379 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 67

Conread position: 2-170
Cow position: chr9:45141491-45141330 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 30

Conread position: 2-172
Cow position: chr9:4267873-4267703 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 150, 70

Conread position: 2-176
Cow position: chr9:29825147-29825323 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 138, 63

Conread position: 2-179
Cow position: chr9:33093063-33093241 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 65

Conread position: 2-196
Cow position: chr9:33119775-33119577 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 145, 70

Conread position: 2-201
Cow position: chr9:37141341-37141533 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 66

Conread position: 2-225
Cow position: chr9:26279061-26278836 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 31

Conread position: 2-232
Cow position: chr9:33940715-33940957 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 55

Conread position: 2-246
Cow position: chr9:29034920-29034702 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 2-256
Cow position: chr9:47875844-47875584 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 29

Conread position: 2-258
Cow position: chr9:41513734-41513980 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 10

Conread position: 2-271
Cow position: chr9:49764767-49765060 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 30

Conread position: 2-274
Cow position: chr9:52578425-52578142 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 10

Conread position: 2-276
Cow position: chr9:36999950-36999678 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 11

Conread position: 2-278
Cow position: chr9:38344001-38344253 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 2-295
Cow position: chr9:40542229-40542523 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 64

Conread position: 2-304
Cow position: chr9:25657619-25657908 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 37, 71

Conread position: 2-312
Cow position: chr9:56453439-56453743 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 84

Conread position: 2-320
Cow position: chr9:35167282-35167573 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 39, 54

Conread position: 2-321
Cow position: chr9:7363133-7363436 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 66

Conread position: 2-323
Cow position: chr9:26310665-26310999 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 71

Conread position: 2-323
Cow position: chr9:41958689-41958382 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 72

Conread position: 2-337
Cow position: chr9:50080936-50080629 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 54

Conread position: 2-373
Cow position: chr9:10761239-10760867 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 40

Conread position: 2-386
Cow position: chr9:27697618-27697269 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 2-397
Cow position: chr9:8723904-8724299 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 60

Conread position: 2-397
Cow position: chr9:37069459-37069072 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 72

Conread position: 2-397
Cow position: chr9:42445869-42445502 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 55

Conread position: 2-427
Cow position: chr9:42585515-42585121 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 67

Conread position: 2-427
Cow position: chr9:52505200-52504796 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 75

Conread position: 2-472
Cow position: chr9:29006673-29007120 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 51

Conread position: 2-474
Cow position: chr9:47500099-47499645 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 2-477
Cow position: chr9:38184374-38183920 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 2-519
Cow position: chr9:2718353-2717860 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 58

Conread position: 2-532
Cow position: chr9:34000513-33999999 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 73

Conread position: 2-537
Cow position: chr9:17310452-17309916 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 46

Conread position: 2-542
Cow position: chr9:43037588-43038133 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 358
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 11, 72

Conread position: 2-544
Cow position: chr9:28726610-28726105 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 53

Conread position: 2-563
Cow position: chr9:23388567-23388032 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 70

Conread position: 2-568
Cow position: chr9:6089202-6089753 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 98

Conread position: 2-573
Cow position: chr9:18140186-18139656 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 60

Conread position: 2-581
Cow position: chr9:7634384-7634919 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 70

Conread position: 2-581
Cow position: chr9:9200615-9200060 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 71

Conread position: 2-581
Cow position: chr9:20989347-20988778 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 37

Conread position: 2-582
Cow position: chr9:28773232-28773782 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 54

Conread position: 2-583
Cow position: chr9:1520627-1520064 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 2-583
Cow position: chr9:1950030-1950578 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 2-583
Cow position: chr9:1984415-1983841 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 95

Conread position: 2-583
Cow position: chr9:9723773-9723225 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 2-583
Cow position: chr9:15805814-15805261 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 21

Conread position: 2-583
Cow position: chr9:15982974-15982417 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 2-583
Cow position: chr9:20901014-20900453 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 68

Conread position: 2-583
Cow position: chr9:21460042-21459497 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 2-583
Cow position: chr9:24997409-24996834 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 2-583
Cow position: chr9:30402310-30401757 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 2-583
Cow position: chr9:31077570-31077006 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 69

Conread position: 2-583
Cow position: chr9:35100978-35101540 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 71

Conread position: 2-583
Cow position: chr9:38961324-38960770 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 45

Conread position: 2-583
Cow position: chr9:53608284-53607729 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 70

Conread position: 2-593
Cow position: chr9:9443487-9442922 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 55

Conread position: 2-602
Cow position: chr9:24872942-24873522 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 3-133
Cow position: chr9:45756472-45756597 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-136
Cow position: chr9:49709949-49710084 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-144
Cow position: chr9:34742618-34742480 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 68

Conread position: 3-144
Cow position: chr9:35850011-35850147 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 3-146
Cow position: chr9:5245967-5246099 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 3-146
Cow position: chr9:5327367-5327504 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 3-146
Cow position: chr9:6879878-6880020 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 13

Conread position: 3-146
Cow position: chr9:18008752-18008617 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 62

Conread position: 3-146
Cow position: chr9:37016995-37017134 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 61

Conread position: 3-146
Cow position: chr9:54681616-54681752 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 54

Conread position: 3-146
Cow position: chr9:55889916-55890059 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 67

Conread position: 3-213
Cow position: chr9:2977487-2977699 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 73

Conread position: 3-397
Cow position: chr9:41789396-41789768 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 19

Conread position: 3-483
Cow position: chr9:58133915-58133403 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 3-515
Cow position: chr9:25958529-25959052 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 53

Conread position: 3-583
Cow position: chr9:34689490-34688927 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 53

Conread position: 3-584
Cow position: chr9:58673846-58674427 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 73

Conread position: 4-141
Cow position: chr9:8562950-8563086 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 4-146
Cow position: chr9:13670745-13670886 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 4-146
Cow position: chr9:13994296-13994438 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 66

Conread position: 4-497
Cow position: chr9:10144364-10143854 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 4-583
Cow position: chr9:15215573-15214995 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 65

Conread position: 5-141
Cow position: chr9:35359995-35359857 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 69

Conread position: 5-145
Cow position: chr9:6952203-6952340 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 52

Conread position: 5-146
Cow position: chr9:5319743-5319879 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 5-146
Cow position: chr9:19539204-19539347 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 71

Conread position: 5-147
Cow position: chr9:18216990-18216849 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 5-204
Cow position: chr9:20091155-20091348 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 61

Conread position: 5-271
Cow position: chr9:32306325-32306068 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 50

Conread position: 6-291
Cow position: chr9:5763519-5763259 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 50

Conread position: 7-146
Cow position: chr9:58439665-58439531 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 45

Conread position: 7-265
Cow position: chr9:51928813-51929067 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 7-396
Cow position: chr9:54528627-54528985 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 266
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 41

Conread position: 7-401
Cow position: chr9:30020083-30020480 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 269
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 246

Conread position: 7-583
Cow position: chr9:30477665-30477125 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 58

Conread position: 8-146
Cow position: chr9:28747407-28747272 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 9-142
Cow position: chr9:8546436-8546564 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 10-433
Cow position: chr9:6626549-6626982 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 29, 169

Conread position: 12-144
Cow position: chr9:29338917-29338785 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 61

Conread position: 12-146
Cow position: chr9:20465596-20465463 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 15-146
Cow position: chr9:22361135-22361265 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 15-438
Cow position: chr9:34400158-34400579 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 16-584
Cow position: chr9:25969467-25970014 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 17-146
Cow position: chr9:51557240-51557112 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 19-397
Cow position: chr9:41317839-41317476 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 313, 54

Conread position: 20-461
Cow position: chr9:61236396-61236847 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 301
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 32, 45

Conread position: 20-515
Cow position: chr9:44552877-44553373 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 13

Conread position: 21-150
Cow position: chr9:34355800-34355671 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 53

Conread position: 21-522
Cow position: chr9:5399848-5400367 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 23-139
Cow position: chr9:3186270-3186385 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 24-370
Cow position: chr9:40060198-40059853 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 49

Conread position: 24-540
Cow position: chr9:19267031-19266523 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 48

Conread position: 24-581
Cow position: chr9:8612416-8612962 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 49

Conread position: 24-581
Cow position: chr9:34093297-34092732 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 50

Conread position: 28-280
Cow position: chr9:3582806-3582560 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 5

Conread position: 29-365
Cow position: chr9:48118559-48118230 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 35

Conread position: 30-285
Cow position: chr9:48856471-48856705 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 41

Conread position: 33-581
Cow position: chr9:9558116-9558642 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 25

Conread position: 39-309
Cow position: chr9:8570879-8571155 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 40

Conread position: 83-290
Cow position: chr9:33697469-33697271 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 85-332
Cow position: chr9:19067987-19068236 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 0

Conread position: 191-581
Cow position: chr9:23422453-23422080 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 90, 114

Conread position: 200-584
Cow position: chr9:34523506-34523876 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 76

Conread position: 205-397
Cow position: chr9:10876800-10876612 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 57, 27

Conread position: 205-514
Cow position: chr9:55983445-55983132 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 57

Conread position: 206-390
Cow position: chr9:8534400-8534221 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 206-583
Cow position: chr9:9780086-9780457 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 120

Conread position: 207-423
Cow position: chr9:789070-789286 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 175, 132

Conread position: 208-389
Cow position: chr9:34918996-34918819 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 141

Conread position: 208-397
Cow position: chr9:4126332-4126517 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 0

Conread position: 208-465
Cow position: chr9:11097727-11097475 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 208-470
Cow position: chr9:37510305-37510563 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 77

Conread position: 208-515
Cow position: chr9:51691741-51692051 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 144

Conread position: 208-532
Cow position: chr9:24726390-24726065 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 61

Conread position: 208-537
Cow position: chr9:41932358-41932696 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 174, 9

Conread position: 208-546
Cow position: chr9:3724774-3724439 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 261, 173

Conread position: 208-559
Cow position: chr9:33823379-33823750 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 208-571
Cow position: chr9:5524479-5524842 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 20

Conread position: 208-586
Cow position: chr9:30736644-30737030 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 132

Conread position: 210-379
Cow position: chr9:2528373-2528204 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 210-563
Cow position: chr9:34901317-34900977 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 14

Conread position: 210-569
Cow position: chr9:18419691-18420032 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 28

Conread position: 210-581
Cow position: chr9:5268846-5269219 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 135

Conread position: 210-583
Cow position: chr9:8525355-8525720 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 129

Conread position: 211-471
Cow position: chr9:28948144-28948411 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 179, 0

Conread position: 211-508
Cow position: chr9:44500552-44500255 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 122, 137

Conread position: 212-521
Cow position: chr9:13115627-13115945 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 118, 236

Conread position: 212-571
Cow position: chr9:10676239-10675868 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 176, 12

Conread position: 212-583
Cow position: chr9:23541152-23540779 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 15

Conread position: 212-590
Cow position: chr9:62668696-62669077 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 91

Conread position: 221-525
Cow position: chr9:20816142-20816447 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 123

Conread position: 223-470
Cow position: chr9:1846708-1846463 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 168, 30

Conread position: 223-586
Cow position: chr9:44921109-44920745 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 121

Conread position: 224-397
Cow position: chr9:6880072-6880247 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 104

Conread position: 226-432
Cow position: chr9:5246151-5246359 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 164, 69

Conread position: 226-466
Cow position: chr9:28747219-28746979 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 119

Conread position: 226-584
Cow position: chr9:26978701-26978342 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 16

Conread position: 231-583
Cow position: chr9:41416773-41417129 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 108

Conread position: 252-555
Cow position: chr9:46524394-46524702 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 264-575
Cow position: chr9:44218657-44218331 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 265-583
Cow position: chr9:5327565-5327883 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 268-434
Cow position: chr9:52689294-52689127 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 75

Conread position: 316-461
Cow position: chr9:13671833-13671972 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 349-492
Cow position: chr9:9947516-9947657 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 59

Conread position: 349-543
Cow position: chr9:59386373-59386172 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.