Cow genome map

Conread name: rpgl08_f5.y1

Conread position: 1-371
Cow position:
Alignm length: 397
Alignm identity: 268
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 22

Conread position: 2-374
Cow position:
Alignm length: 376
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 21

Conread position: 3-167
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 20

Conread position: 4-292
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 135, 19

Conread position: 4-351
Cow position:
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 19

Conread position: 5-371
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 40

Conread position: 7-371
Cow position:
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 33

Conread position: 7-371
Cow position:
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 16

Conread position: 7-378
Cow position:
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 16

Conread position: 8-171
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 9

Conread position: 8-319
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 22

Conread position: 8-371
Cow position:
Alignm length: 369
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 18

Conread position: 8-374
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 8-375
Cow position:
Alignm length: 373
Alignm identity: 256
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 15

Conread position: 8-391
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 15

Conread position: 10-168
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 13

Conread position: 11-194
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 137

Conread position: 11-261
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 123, 15

Conread position: 13-356
Cow position:
Alignm length: 357
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 13-371
Cow position:
Alignm length: 363
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 74

Conread position: 13-385
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 66

Conread position: 13-386
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 10

Conread position: 13-391
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 10

Conread position: 15-136
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 16-378
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 129

Conread position: 17-283
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 17-296
Cow position:
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 152

Conread position: 17-354
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 156

Conread position: 17-371
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 70

Conread position: 19-346
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 135

Conread position: 20-351
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 73

Conread position: 20-371
Cow position:
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 75

Conread position: 23-356
Cow position:
Alignm length: 340
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 90

Conread position: 23-364
Cow position:
Alignm length: 345
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 281, 62

Conread position: 23-369
Cow position:
Alignm length: 350
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 42

Conread position: 25-371
Cow position:
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 347

Conread position: 31-371
Cow position:
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 34-391
Cow position:
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 31

Conread position: 35-310
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 35-385
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 51

Conread position: 36-384
Cow position:
Alignm length: 356
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 70

Conread position: 37-378
Cow position:
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 106

Conread position: 44-316
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 47

Conread position: 44-391
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 35

Conread position: 45-302
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 131

Conread position: 45-385
Cow position:
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 9

Conread position: 47-378
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 50-371
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 196, 45

Conread position: 54-371
Cow position:
Alignm length: 324
Alignm identity: 216
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 62

Conread position: 70-391
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 151, 85

Conread position: 88-370
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 68

Conread position: 91-371
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 157, 29

Conread position: 123-365
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 33

Conread position: 125-371
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 15

Conread position: 132-371
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 43

Conread position: 201-371
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 41

Conread position: 204-378
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 15

Conread position: 205-378
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 158

Conread position: 210-371
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 8

Conread position: 218-391
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 89, 142

Conread position: 221-346
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 223-391
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 100

Show alignments to all cow chromosomes.