Cow genome map


           Conread name:
           rpgl08_f5.y1
        

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               133, 16
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               147, 22
               

               Conread position:
               7-378
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               7-391
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 23
               

               Conread position:
               8-371
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               278
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               8-371
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 9
               

               Conread position:
               8-371
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 129
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 18
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 139
               

               Conread position:
               11-215
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               11-371
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               13-226
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               13-262
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               13-352
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 88
               

               Conread position:
               13-353
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 10
               

               Conread position:
               13-371
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 128
               

               Conread position:
               13-371
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 10
               

               Conread position:
               13-371
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 104
               

               Conread position:
               13-378
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               16-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 82
               

               Conread position:
               16-378
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               17-135
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               17-144
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-168
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 139
               

               Conread position:
               17-334
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               117, 139
               

               Conread position:
               17-336
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               17-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 323
               

               Conread position:
               17-371
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               17-371
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 50
               

               Conread position:
               17-375
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 113
               

               Conread position:
               17-378
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               17-378
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               276, 141
               

               Conread position:
               17-391
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               18-371
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 156
               

               Conread position:
               18-371
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 148
               

               Conread position:
               19-253
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               19-386
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               115, 91
               

               Conread position:
               20-275
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               115, 157
               

               Conread position:
               20-287
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 113
               

               Conread position:
               20-371
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 145
               

               Conread position:
               20-371
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 89
               

               Conread position:
               23-278
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               54, 116
               

               Conread position:
               23-371
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               27-371
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 148
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 234
               

               Conread position:
               35-391
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 76
               

               Conread position:
               38-371
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               40-321
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 9
               

               Conread position:
               44-171
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               45-371
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 97
               

               Conread position:
               46-226
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               90, 123
               

               Conread position:
               46-391
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 110
               

               Conread position:
               49-325
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               101, 37
               

               Conread position:
               50-371
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               242, 62
               

               Conread position:
               51-378
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 97
               

               Conread position:
               54-371
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 32
               

               Conread position:
               70-368
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               222, 49
               

               Conread position:
               70-387
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               166, 71
               

               Conread position:
               71-363
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               127, 102
               

               Conread position:
               131-371
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               175, 43
               

               Conread position:
               203-391
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               203-391
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               204-378
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 160
               

               Conread position:
               205-345
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               209-356
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               210-351
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               91, 113
               

               Conread position:
               210-371
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               211-371
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               215-371
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               224-386
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               83, 136
               

               Conread position:
               268-371
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               271-371
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.