Cow genome map
Conread name: | rpgl08_f5.y1 |
Conread position: | 1-371 |
Cow position: | chr14:31380958-31380580 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 43 |
Conread position: | 2-352 |
Cow position: | chr14:43220186-43219853 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 114 |
Conread position: | 2-370 |
Cow position: | chr14:25988343-25988719 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 23 |
Conread position: | 2-375 |
Cow position: | chr14:21998300-21998660 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 13 |
Conread position: | 3-352 |
Cow position: | chr14:46564473-46564836 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 135 |
Conread position: | 4-371 |
Cow position: | chr14:32723621-32723973 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 19 |
Conread position: | 5-363 |
Cow position: | chr14:44481561-44481194 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 12 |
Conread position: | 5-371 |
Cow position: | chr14:33595007-33595362 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 71 |
Conread position: | 6-299 |
Cow position: | chr14:37769043-37768754 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 207 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 128, 150 |
Conread position: | 7-332 |
Cow position: | chr14:42409225-42409567 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 16 |
Conread position: | 8-378 |
Cow position: | chr14:35172977-35172618 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 9 |
Conread position: | 8-391 |
Cow position: | chr14:21875616-21875239 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 139 |
Conread position: | 11-352 |
Cow position: | chr14:11672611-11672276 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 12 |
Conread position: | 11-371 |
Cow position: | chr14:46046531-46046150 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 272 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 145, 12 |
Conread position: | 11-372 |
Cow position: | chr14:12299372-12299747 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 84 |
Conread position: | 13-272 |
Cow position: | chr14:21776904-21776649 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 193 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 115, 134 |
Conread position: | 13-352 |
Cow position: | chr14:1208980-1208641 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 10 |
Conread position: | 13-371 |
Cow position: | chr14:2326380-2326718 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 14 |
Conread position: | 13-371 |
Cow position: | chr14:45764104-45763735 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 13 |
Conread position: | 13-372 |
Cow position: | chr14:25170872-25170516 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 38 |
Conread position: | 16-292 |
Cow position: | chr14:9580664-9580396 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 202 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 123, 131 |
Conread position: | 16-364 |
Cow position: | chr14:1454623-1454284 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 83 |
Conread position: | 17-265 |
Cow position: | chr14:18213373-18213142 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 17-345 |
Cow position: | chr14:46582974-46582635 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 10 |
Conread position: | 17-371 |
Cow position: | chr14:3168152-3168504 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 121 |
Conread position: | 17-371 |
Cow position: | chr14:32797521-32797872 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 151 |
Conread position: | 17-372 |
Cow position: | chr14:14779271-14778904 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 77 |
Conread position: | 17-390 |
Cow position: | chr14:3332897-3332540 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 271 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 117, 31 |
Conread position: | 18-386 |
Cow position: | chr14:3926141-3925770 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 100 |
Conread position: | 19-343 |
Cow position: | chr14:26186098-26186410 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 235 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 124, 139 |
Conread position: | 20-212 |
Cow position: | chr14:46952568-46952757 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 137 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 92, 74 |
Conread position: | 20-374 |
Cow position: | chr14:48105254-48104898 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 59 |
Conread position: | 23-371 |
Cow position: | chr14:45595304-45594951 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 254 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 120, 209 |
Conread position: | 27-356 |
Cow position: | chr14:37448293-37447971 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 15 |
Conread position: | 44-352 |
Cow position: | chr14:25151117-25151447 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 240 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 137, 53 |
Conread position: | 46-371 |
Cow position: | chr14:29712676-29712350 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 242 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 135, 50 |
Conread position: | 67-378 |
Cow position: | chr14:24385584-24385885 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 227 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 21, 81 |
Conread position: | 68-345 |
Cow position: | chr14:26130720-26130463 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 80-349 |
Cow position: | chr14:3094570-3094834 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 61 |
Conread position: | 91-356 |
Cow position: | chr14:35049207-35049486 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 205 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 102, 32 |
Conread position: | 200-367 |
Cow position: | chr14:8217378-8217542 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 19, 72 |
Conread position: | 203-375 |
Cow position: | chr14:12369346-12369513 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 88, 15 |
Conread position: | 204-341 |
Cow position: | chr14:10735474-10735615 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 7, 56 |
Conread position: | 218-352 |
Cow position: | chr14:46952821-46952953 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 114 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 86, 108 |
Conread position: | 219-356 |
Cow position: | chr14:32215809-32215672 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 40, 100 |
Conread position: | 233-370 |
Cow position: | chr14:1479875-1480019 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.