Cow genome map

Conread name: rpgl08_f5.y1

Conread position: 1-371
Cow position: chr14:31380958-31380580 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 43

Conread position: 2-352
Cow position: chr14:43220186-43219853 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 114

Conread position: 2-370
Cow position: chr14:25988343-25988719 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 23

Conread position: 2-375
Cow position: chr14:21998300-21998660 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 13

Conread position: 3-352
Cow position: chr14:46564473-46564836 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 135

Conread position: 4-371
Cow position: chr14:32723621-32723973 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 19

Conread position: 5-363
Cow position: chr14:44481561-44481194 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 12

Conread position: 5-371
Cow position: chr14:33595007-33595362 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 71

Conread position: 6-299
Cow position: chr14:37769043-37768754 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 128, 150

Conread position: 7-332
Cow position: chr14:42409225-42409567 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 16

Conread position: 8-378
Cow position: chr14:35172977-35172618 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 9

Conread position: 8-391
Cow position: chr14:21875616-21875239 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 139

Conread position: 11-352
Cow position: chr14:11672611-11672276 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 12

Conread position: 11-371
Cow position: chr14:46046531-46046150 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 12

Conread position: 11-372
Cow position: chr14:12299372-12299747 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 84

Conread position: 13-272
Cow position: chr14:21776904-21776649 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 115, 134

Conread position: 13-352
Cow position: chr14:1208980-1208641 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 10

Conread position: 13-371
Cow position: chr14:2326380-2326718 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 14

Conread position: 13-371
Cow position: chr14:45764104-45763735 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 13

Conread position: 13-372
Cow position: chr14:25170872-25170516 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 38

Conread position: 16-292
Cow position: chr14:9580664-9580396 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 123, 131

Conread position: 16-364
Cow position: chr14:1454623-1454284 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 83

Conread position: 17-265
Cow position: chr14:18213373-18213142 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 17-345
Cow position: chr14:46582974-46582635 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 10

Conread position: 17-371
Cow position: chr14:3168152-3168504 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 121

Conread position: 17-371
Cow position: chr14:32797521-32797872 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 151

Conread position: 17-372
Cow position: chr14:14779271-14778904 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 77

Conread position: 17-390
Cow position: chr14:3332897-3332540 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 117, 31

Conread position: 18-386
Cow position: chr14:3926141-3925770 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 100

Conread position: 19-343
Cow position: chr14:26186098-26186410 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 124, 139

Conread position: 20-212
Cow position: chr14:46952568-46952757 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 92, 74

Conread position: 20-374
Cow position: chr14:48105254-48104898 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 59

Conread position: 23-371
Cow position: chr14:45595304-45594951 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 209

Conread position: 27-356
Cow position: chr14:37448293-37447971 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 15

Conread position: 44-352
Cow position: chr14:25151117-25151447 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 137, 53

Conread position: 46-371
Cow position: chr14:29712676-29712350 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 135, 50

Conread position: 67-378
Cow position: chr14:24385584-24385885 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 81

Conread position: 68-345
Cow position: chr14:26130720-26130463 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 80-349
Cow position: chr14:3094570-3094834 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 61

Conread position: 91-356
Cow position: chr14:35049207-35049486 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 102, 32

Conread position: 200-367
Cow position: chr14:8217378-8217542 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 72

Conread position: 203-375
Cow position: chr14:12369346-12369513 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 88, 15

Conread position: 204-341
Cow position: chr14:10735474-10735615 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 56

Conread position: 218-352
Cow position: chr14:46952821-46952953 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 108

Conread position: 219-356
Cow position: chr14:32215809-32215672 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 100

Conread position: 233-370
Cow position: chr14:1479875-1480019 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Show alignments to all cow chromosomes.