Cow genome map
| Conread name: | rpgl08_f5.y1 |
| Conread position: | 2-286 |
| Cow position: | chr19:49072032-49071759 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 7-391 |
| Cow position: | chr19:36293832-36293468 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 8-279 |
| Cow position: | chr19:18076012-18076265 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 8-321 |
| Cow position: | chr19:29957645-29957955 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 15 |
| Conread position: | 8-346 |
| Cow position: | chr19:26010047-26009717 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 15 |
| Conread position: | 8-364 |
| Cow position: | chr19:26017839-26017506 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 88 |
| Conread position: | 8-371 |
| Cow position: | chr19:19767208-19766829 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 8-378 |
| Cow position: | chr19:45590663-45590302 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 9 |
| Conread position: | 11-350 |
| Cow position: | chr19:7592092-7591746 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 11-371 |
| Cow position: | chr19:6489485-6489153 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 123, 12 |
| Conread position: | 13-276 |
| Cow position: | chr19:34245158-34244879 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 13-370 |
| Cow position: | chr19:2074474-2074849 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 162, 331 |
| Conread position: | 13-371 |
| Cow position: | chr19:43240100-43240440 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 125, 13 |
| Conread position: | 17-341 |
| Cow position: | chr19:56007725-56007389 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 19-364 |
| Cow position: | chr19:55123865-55123506 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 112 |
| Conread position: | 19-369 |
| Cow position: | chr19:51938868-51938527 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 54 |
| Conread position: | 19-371 |
| Cow position: | chr19:7581841-7581503 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 20-378 |
| Cow position: | chr19:20417968-20417625 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 22-364 |
| Cow position: | chr19:13249682-13249325 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 23-160 |
| Cow position: | chr19:51980853-51980716 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 27-375 |
| Cow position: | chr19:10367406-10367060 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 129 |
| Conread position: | 33-270 |
| Cow position: | chr19:6487699-6487930 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 101, 61 |
| Conread position: | 35-371 |
| Cow position: | chr19:19764642-19764301 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 133 |
| Conread position: | 38-387 |
| Cow position: | chr19:9080649-9080311 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 46-305 |
| Cow position: | chr19:53837745-53838023 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 46-346 |
| Cow position: | chr19:11433637-11433933 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 133 |
| Conread position: | 63-363 |
| Cow position: | chr19:18629246-18628957 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 76, 97 |
| Conread position: | 76-372 |
| Cow position: | chr19:22166150-22165859 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 101 |
| Conread position: | 101-371 |
| Cow position: | chr19:54415246-54414956 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 116-371 |
| Cow position: | chr19:24226011-24225756 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 200-372 |
| Cow position: | chr19:8770884-8770713 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 205-356 |
| Cow position: | chr19:12124618-12124770 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 221-371 |
| Cow position: | chr19:51980216-51980073 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 233-371 |
| Cow position: | chr19:27833242-27833382 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 233-391 |
| Cow position: | chr19:47320978-47321135 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 72 |
Show alignments to all cow chromosomes.