Cow genome map
| Conread name: | rpgl08_f5.y1 |
| Conread position: | 3-198 |
| Cow position: | chr23:10542323-10542515 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 4-378 |
| Cow position: | chr23:6216270-6215906 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 5-371 |
| Cow position: | chr23:37975401-37975053 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 7-279 |
| Cow position: | chr23:23016375-23016632 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 129, 8 |
| Conread position: | 7-279 |
| Cow position: | chr23:23042332-23042589 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 130, 10 |
| Conread position: | 8-149 |
| Cow position: | chr23:21467134-21466994 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 12-288 |
| Cow position: | chr23:6094144-6094410 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 14 |
| Conread position: | 16-282 |
| Cow position: | chr23:18859052-18858794 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 118, 138 |
| Conread position: | 16-352 |
| Cow position: | chr23:14495231-14495557 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 17-303 |
| Cow position: | chr23:38705161-38704883 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 139 |
| Conread position: | 17-371 |
| Cow position: | chr23:22874464-22874126 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 236, 53 |
| Conread position: | 18-277 |
| Cow position: | chr23:23087848-23088097 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 19-165 |
| Cow position: | chr23:22724095-22723948 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-197 |
| Cow position: | chr23:26758021-26758191 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 19-359 |
| Cow position: | chr23:40912913-40912591 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 20-345 |
| Cow position: | chr23:39713750-39714085 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 133, 102 |
| Conread position: | 20-346 |
| Cow position: | chr23:37712622-37712948 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 8, 93 |
| Conread position: | 20-375 |
| Cow position: | chr23:4547617-4547983 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 21-391 |
| Cow position: | chr23:20767189-20767553 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 126 |
| Conread position: | 23-305 |
| Cow position: | chr23:33619097-33619375 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 47 |
| Conread position: | 23-361 |
| Cow position: | chr23:4829452-4829095 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 118 |
| Conread position: | 27-350 |
| Cow position: | chr23:37664585-37664248 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 151 |
| Conread position: | 40-360 |
| Cow position: | chr23:13097640-13097299 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 125 |
| Conread position: | 44-355 |
| Cow position: | chr23:19676376-19676686 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 87, 52 |
| Conread position: | 44-386 |
| Cow position: | chr23:33450070-33449740 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 45-371 |
| Cow position: | chr23:41375325-41374992 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 87-282 |
| Cow position: | chr23:18871741-18871554 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 143-329 |
| Cow position: | chr23:5713046-5713228 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 209-371 |
| Cow position: | chr23:19637034-19636866 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 212-371 |
| Cow position: | chr23:10542546-10542705 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 95, 147 |
| Conread position: | 233-371 |
| Cow position: | chr23:9727764-9727623 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 125 |
| Conread position: | 249-391 |
| Cow position: | chr23:26758436-26758580 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 255-363 |
| Cow position: | chr23:26993553-26993661 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 97 |
Show alignments to all cow chromosomes.