Cow genome map
Conread name: | rpgl08_f5.y1 |
Conread position: | 1-371 |
Cow position: | chr24:2448538-2448193 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 22 |
Conread position: | 4-262 |
Cow position: | chr24:239255-239502 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 130, 22 |
Conread position: | 5-167 |
Cow position: | chr24:31203539-31203706 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 8-379 |
Cow position: | chr24:24901683-24902041 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 22 |
Conread position: | 8-386 |
Cow position: | chr24:23686847-23686477 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 23 |
Conread position: | 12-371 |
Cow position: | chr24:9166747-9167103 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 247 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 16, 33 |
Conread position: | 13-199 |
Cow position: | chr24:36905129-36905312 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 121, 10 |
Conread position: | 13-356 |
Cow position: | chr24:2121432-2121095 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 135 |
Conread position: | 13-370 |
Cow position: | chr24:26680095-26680448 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 97 |
Conread position: | 13-371 |
Cow position: | chr24:17844725-17845098 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 10 |
Conread position: | 14-177 |
Cow position: | chr24:319597-319437 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 17-371 |
Cow position: | chr24:11907635-11907301 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 240 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 274, 79 |
Conread position: | 18-372 |
Cow position: | chr24:35552838-35553178 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 244 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 8, 124 |
Conread position: | 19-363 |
Cow position: | chr24:27254485-27254130 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 92 |
Conread position: | 23-371 |
Cow position: | chr24:6089372-6089013 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 153 |
Conread position: | 27-305 |
Cow position: | chr24:24646360-24646071 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 110, 64 |
Conread position: | 34-375 |
Cow position: | chr24:42009492-42009140 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 244 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 139, 64 |
Conread position: | 38-341 |
Cow position: | chr24:33446438-33446144 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 13 |
Conread position: | 45-364 |
Cow position: | chr24:27333306-27332982 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 233 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 129, 41 |
Conread position: | 45-386 |
Cow position: | chr24:17972802-17973140 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 102 |
Conread position: | 48-386 |
Cow position: | chr24:20260536-20260214 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 106 |
Conread position: | 54-278 |
Cow position: | chr24:9357169-9357384 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 156 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 80, 95 |
Conread position: | 54-289 |
Cow position: | chr24:26874069-26874290 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 54-391 |
Cow position: | chr24:9095949-9096280 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 102 |
Conread position: | 55-391 |
Cow position: | chr24:36905974-36906308 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 10 |
Conread position: | 202-371 |
Cow position: | chr24:319201-319036 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 210-371 |
Cow position: | chr24:6073573-6073414 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 88, 13 |
Conread position: | 218-371 |
Cow position: | chr24:31203784-31203938 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 86, 104 |
Conread position: | 227-371 |
Cow position: | chr24:29356000-29356146 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 69, 16 |
Conread position: | 232-391 |
Cow position: | chr24:245945-246105 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 75, 91 |
Conread position: | 233-371 |
Cow position: | chr24:5917351-5917492 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 118 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 63, 125 |
Conread position: | 249-371 |
Cow position: | chr24:36836420-36836298 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 103 |
Show alignments to all cow chromosomes.