Cow genome map
Conread name: | rpgl08_f5.y1 |
Conread position: | 1-370 |
Cow position: | chr25:6261324-6261686 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 60 |
Conread position: | 4-371 |
Cow position: | chr25:22265353-22265728 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 72 |
Conread position: | 5-200 |
Cow position: | chr25:9597892-9597698 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 154 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 61, 138 |
Conread position: | 5-323 |
Cow position: | chr25:16812064-16811760 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 233 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 66, 23 |
Conread position: | 6-371 |
Cow position: | chr25:15914533-15914887 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 253 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 83, 51 |
Conread position: | 8-371 |
Cow position: | chr25:18679684-18679335 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 45 |
Conread position: | 8-391 |
Cow position: | chr25:4498858-4498484 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 124 |
Conread position: | 8-391 |
Cow position: | chr25:8557034-8556662 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 18 |
Conread position: | 15-176 |
Cow position: | chr25:34438502-34438660 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 113, 11 |
Conread position: | 18-371 |
Cow position: | chr25:22272414-22272049 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 34 |
Conread position: | 19-199 |
Cow position: | chr25:6962439-6962260 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 109, 138 |
Conread position: | 19-279 |
Cow position: | chr25:30350140-30350385 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 185 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 115, 52 |
Conread position: | 19-346 |
Cow position: | chr25:5898982-5899301 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 51 |
Conread position: | 19-371 |
Cow position: | chr25:5868319-5868659 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 83 |
Conread position: | 19-371 |
Cow position: | chr25:15479365-15479728 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 119 |
Conread position: | 20-371 |
Cow position: | chr25:15632215-15632575 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 119 |
Conread position: | 23-389 |
Cow position: | chr25:17374101-17374460 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 57 |
Conread position: | 35-371 |
Cow position: | chr25:31580663-31580317 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 66 |
Conread position: | 44-371 |
Cow position: | chr25:6257075-6257418 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 131 |
Conread position: | 44-371 |
Cow position: | chr25:41167535-41167849 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 225, 10 |
Conread position: | 47-370 |
Cow position: | chr25:29816521-29816854 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 14 |
Conread position: | 56-387 |
Cow position: | chr25:26100262-26099937 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 248, 14 |
Conread position: | 66-347 |
Cow position: | chr25:20247756-20248047 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 57 |
Conread position: | 144-327 |
Cow position: | chr25:15457035-15457214 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 139 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 75, 29 |
Conread position: | 200-379 |
Cow position: | chr25:7668326-7668145 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 143 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 19, 161 |
Conread position: | 203-341 |
Cow position: | chr25:23677570-23677711 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 203-346 |
Cow position: | chr25:34439446-34439586 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 13, 116 |
Conread position: | 204-386 |
Cow position: | chr25:7802793-7802974 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 51, 44 |
Conread position: | 209-371 |
Cow position: | chr25:4506558-4506718 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 80, 115 |
Conread position: | 227-371 |
Cow position: | chr25:9597692-9597549 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 118, 89 |
Conread position: | 233-371 |
Cow position: | chr25:19017839-19017698 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 61, 125 |
Conread position: | 249-371 |
Cow position: | chr25:15961099-15960979 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 105 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 51, 105 |
Show alignments to all cow chromosomes.