Cow genome map
| Conread name: | rpgl08_f5.y1 |
| Conread position: | 1-363 |
| Cow position: | chr26:18847387-18847759 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 22 |
| Conread position: | 1-391 |
| Cow position: | chr26:13743750-13743369 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 22 |
| Conread position: | 7-391 |
| Cow position: | chr26:1542304-1542681 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 8-171 |
| Cow position: | chr26:6663109-6663269 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-334 |
| Cow position: | chr26:10984898-10985217 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 8-364 |
| Cow position: | chr26:29776426-29776061 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 19 |
| Conread position: | 8-368 |
| Cow position: | chr26:375703-376056 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 8-371 |
| Cow position: | chr26:11823925-11823563 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 163 |
| Conread position: | 8-371 |
| Cow position: | chr26:12264539-12264173 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 15 |
| Conread position: | 8-371 |
| Cow position: | chr26:24954322-24954689 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 8-391 |
| Cow position: | chr26:6530399-6530025 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 11-332 |
| Cow position: | chr26:12220963-12220652 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 12 |
| Conread position: | 13-347 |
| Cow position: | chr26:34857910-34857574 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 204, 13 |
| Conread position: | 13-356 |
| Cow position: | chr26:6604727-6605053 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 13-371 |
| Cow position: | chr26:11988935-11989310 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 156 |
| Conread position: | 17-169 |
| Cow position: | chr26:15627862-15627712 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 17-275 |
| Cow position: | chr26:29764857-29764612 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 124 |
| Conread position: | 18-355 |
| Cow position: | chr26:35105365-35105689 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 34 |
| Conread position: | 18-371 |
| Cow position: | chr26:18490500-18490843 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 18-371 |
| Cow position: | chr26:18507839-18508182 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 18-391 |
| Cow position: | chr26:26673762-26674127 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 19-378 |
| Cow position: | chr26:34993493-34993146 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 19-391 |
| Cow position: | chr26:19761368-19761733 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 137 |
| Conread position: | 20-319 |
| Cow position: | chr26:28745423-28745150 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 284, 76 |
| Conread position: | 23-371 |
| Cow position: | chr26:34782697-34782374 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 280, 53 |
| Conread position: | 25-135 |
| Cow position: | chr26:2921167-2921276 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 30-278 |
| Cow position: | chr26:27157203-27156963 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 104, 116 |
| Conread position: | 30-371 |
| Cow position: | chr26:28459210-28458879 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 269, 15 |
| Conread position: | 48-170 |
| Cow position: | chr26:19169154-19169031 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 64-370 |
| Cow position: | chr26:10990664-10990370 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 53 |
| Conread position: | 122-371 |
| Cow position: | chr26:28697586-28697336 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 155-371 |
| Cow position: | chr26:7062013-7062231 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 140 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 201-371 |
| Cow position: | chr26:31954401-31954235 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 210-347 |
| Cow position: | chr26:15627362-15627222 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 211-354 |
| Cow position: | chr26:19167770-19167628 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 112 |
Show alignments to all cow chromosomes.