Cow genome map
| Conread name: | rpgl08_f5.y1 | 
| Conread position: | 1-378 | 
| Cow position: | chr3:28207968-28207611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 22 | 
| Conread position: | 5-167 | 
| Cow position: | chr3:22699320-22699158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 16, 146 | 
| Conread position: | 5-205 | 
| Cow position: | chr3:82508110-82508309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 165, 106 | 
| Conread position: | 5-352 | 
| Cow position: | chr3:7830233-7830597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 18 | 
| Conread position: | 7-352 | 
| Cow position: | chr3:24773421-24773082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 298, 16 | 
| Conread position: | 8-158 | 
| Cow position: | chr3:65525743-65525891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 8-192 | 
| Cow position: | chr3:42935830-42936011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 126, 19 | 
| Conread position: | 8-275 | 
| Cow position: | chr3:60520662-60520917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 126, 18 | 
| Conread position: | 8-276 | 
| Cow position: | chr3:28462287-28462544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 123, 9 | 
| Conread position: | 8-278 | 
| Cow position: | chr3:75097486-75097750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 23, 146 | 
| Conread position: | 8-352 | 
| Cow position: | chr3:60068027-60067696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 293, 15 | 
| Conread position: | 8-371 | 
| Cow position: | chr3:7812905-7812557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 15 | 
| Conread position: | 8-371 | 
| Cow position: | chr3:10687737-10688116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 167 | 
| Conread position: | 8-391 | 
| Cow position: | chr3:6190478-6190095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 15 | 
| Conread position: | 8-391 | 
| Cow position: | chr3:14296494-14296120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 18 | 
| Conread position: | 8-391 | 
| Cow position: | chr3:35352370-35352739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 18 | 
| Conread position: | 11-118 | 
| Cow position: | chr3:28463924-28464029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 11-354 | 
| Cow position: | chr3:81391015-81391336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 15 | 
| Conread position: | 11-371 | 
| Cow position: | chr3:5619530-5619188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 39, 87 | 
| Conread position: | 12-363 | 
| Cow position: | chr3:77332712-77333051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 14 | 
| Conread position: | 13-191 | 
| Cow position: | chr3:22702447-22702621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 53, 17 | 
| Conread position: | 13-201 | 
| Cow position: | chr3:56307820-56308006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 28, 10 | 
| Conread position: | 13-250 | 
| Cow position: | chr3:3804045-3803816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 121, 143 | 
| Conread position: | 13-316 | 
| Cow position: | chr3:36843982-36844273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 44, 14 | 
| Conread position: | 13-319 | 
| Cow position: | chr3:74711461-74711151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 10 | 
| Conread position: | 13-347 | 
| Cow position: | chr3:2306127-2306474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 217 | 
| Conread position: | 13-370 | 
| Cow position: | chr3:1839926-1839555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 159 | 
| Conread position: | 13-371 | 
| Cow position: | chr3:19696736-19696385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 187, 10 | 
| Conread position: | 13-372 | 
| Cow position: | chr3:85150233-85149881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 53 | 
| Conread position: | 13-385 | 
| Cow position: | chr3:28485691-28485328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 134 | 
| Conread position: | 13-391 | 
| Cow position: | chr3:77944097-77943733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 89, 10 | 
| Conread position: | 16-372 | 
| Cow position: | chr3:11952449-11952787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 290, 11 | 
| Conread position: | 17-333 | 
| Cow position: | chr3:36780514-36780824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 121 | 
| Conread position: | 17-345 | 
| Cow position: | chr3:9194764-9195098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 117, 67 | 
| Conread position: | 17-369 | 
| Cow position: | chr3:22696563-22696906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 116 | 
| Conread position: | 17-370 | 
| Cow position: | chr3:17641615-17641990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 186, 102 | 
| Conread position: | 17-371 | 
| Cow position: | chr3:33020355-33020700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 151 | 
| Conread position: | 17-371 | 
| Cow position: | chr3:49006442-49006097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 35 | 
| Conread position: | 17-371 | 
| Cow position: | chr3:58307126-58306783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 163 | 
| Conread position: | 17-371 | 
| Cow position: | chr3:84919471-84919130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 133 | 
| Conread position: | 18-277 | 
| Cow position: | chr3:24797630-24797364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 125, 34 | 
| Conread position: | 18-291 | 
| Cow position: | chr3:38124646-38124911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 116, 129 | 
| Conread position: | 18-371 | 
| Cow position: | chr3:59205744-59205392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 155 | 
| Conread position: | 18-391 | 
| Cow position: | chr3:3253555-3253923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 130 | 
| Conread position: | 19-287 | 
| Cow position: | chr3:60507873-60508133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 128 | 
| Conread position: | 19-370 | 
| Cow position: | chr3:28724949-28724607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 240, 77 | 
| Conread position: | 19-378 | 
| Cow position: | chr3:78548646-78548994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 32 | 
| Conread position: | 19-391 | 
| Cow position: | chr3:84954631-84954997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 138 | 
| Conread position: | 20-200 | 
| Cow position: | chr3:53578241-53578421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 133, 150 | 
| Conread position: | 20-224 | 
| Cow position: | chr3:56305301-56305104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 148, 0 | 
| Conread position: | 22-375 | 
| Cow position: | chr3:6645713-6645370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 132 | 
| Conread position: | 23-166 | 
| Cow position: | chr3:6050022-6049879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 23-356 | 
| Cow position: | chr3:23846941-23846614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 134 | 
| Conread position: | 23-357 | 
| Cow position: | chr3:36783244-36783573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 153 | 
| Conread position: | 23-375 | 
| Cow position: | chr3:83785445-83785781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 270, 97 | 
| Conread position: | 25-344 | 
| Cow position: | chr3:6762114-6762450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 99 | 
| Conread position: | 34-204 | 
| Cow position: | chr3:5534705-5534538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 35-363 | 
| Cow position: | chr3:49849815-49850153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 11 | 
| Conread position: | 37-391 | 
| Cow position: | chr3:28443949-28443607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 64 | 
| Conread position: | 38-325 | 
| Cow position: | chr3:48037247-48037530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 110 | 
| Conread position: | 39-299 | 
| Cow position: | chr3:30988272-30988015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 229, 129 | 
| Conread position: | 42-391 | 
| Cow position: | chr3:7810087-7810443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 98, 182 | 
| Conread position: | 44-391 | 
| Cow position: | chr3:32168554-32168215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 107 | 
| Conread position: | 45-378 | 
| Cow position: | chr3:48090947-48091269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 108 | 
| Conread position: | 46-359 | 
| Cow position: | chr3:11030187-11030518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 132 | 
| Conread position: | 50-372 | 
| Cow position: | chr3:2060091-2059787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 248, 88 | 
| Conread position: | 50-382 | 
| Cow position: | chr3:29705699-29705378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 235, 83 | 
| Conread position: | 54-361 | 
| Cow position: | chr3:34868488-34868181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 118 | 
| Conread position: | 69-378 | 
| Cow position: | chr3:5737150-5736866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 65, 50 | 
| Conread position: | 70-371 | 
| Cow position: | chr3:48573461-48573169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 221, 26 | 
| Conread position: | 80-386 | 
| Cow position: | chr3:7810024-7809728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 54, 76 | 
| Conread position: | 112-391 | 
| Cow position: | chr3:28464553-28464836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 29 | 
| Conread position: | 116-371 | 
| Cow position: | chr3:65525898-65526163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 87, 58 | 
| Conread position: | 141-371 | 
| Cow position: | chr3:28692074-28692304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 9, 33 | 
| Conread position: | 145-363 | 
| Cow position: | chr3:31360122-31360332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 74, 28 | 
| Conread position: | 193-369 | 
| Cow position: | chr3:6049605-6049430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 114, 18 | 
| Conread position: | 193-371 | 
| Cow position: | chr3:25899142-25899323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 19, 41 | 
| Conread position: | 204-378 | 
| Cow position: | chr3:22699140-22698968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 15, 120 | 
| Conread position: | 204-391 | 
| Cow position: | chr3:34399216-34399032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 100, 61 | 
| Conread position: | 210-371 | 
| Cow position: | chr3:10215696-10215545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 97, 32 | 
| Conread position: | 211-371 | 
| Cow position: | chr3:28500950-28500793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 23, 28 | 
| Conread position: | 215-363 | 
| Cow position: | chr3:3251543-3251400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 76, 92 | 
| Conread position: | 215-374 | 
| Cow position: | chr3:48095266-48095426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 92, 145 | 
| Conread position: | 215-375 | 
| Cow position: | chr3:81387245-81387083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 92, 146 | 
| Conread position: | 218-378 | 
| Cow position: | chr3:56308283-56308442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 88, 105 | 
| Conread position: | 233-371 | 
| Cow position: | chr3:45838909-45838766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 248-371 | 
| Cow position: | chr3:82515718-82515841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 60, 21 | 
Show alignments to all cow chromosomes.
