Cow genome map

Conread name: rpgl08_f5.y1

Conread position: 1-391
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 25

Conread position: 2-378
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 15

Conread position: 5-356
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 7-378
Cow position:
Alignm length: 384
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 16

Conread position: 7-391
Cow position:
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 10

Conread position: 8-235
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 123, 15

Conread position: 8-259
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 22

Conread position: 8-371
Cow position:
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 78

Conread position: 8-371
Cow position:
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 35

Conread position: 8-391
Cow position:
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 8-391
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 11-169
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 13-119
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 13-190
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 13-274
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 10

Conread position: 13-278
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 144

Conread position: 13-363
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 125

Conread position: 13-371
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 10

Conread position: 13-371
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 16-310
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 16-370
Cow position:
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 220

Conread position: 16-375
Cow position:
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 16-391
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 140

Conread position: 16-391
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 18

Conread position: 17-274
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 170

Conread position: 17-371
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 121

Conread position: 17-371
Cow position:
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 17-372
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 151

Conread position: 17-374
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 107

Conread position: 17-378
Cow position:
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 130

Conread position: 18-333
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 110, 138

Conread position: 18-371
Cow position:
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 322

Conread position: 19-171
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 48

Conread position: 19-279
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 19

Conread position: 19-371
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 187

Conread position: 19-391
Cow position:
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 135

Conread position: 23-363
Cow position:
Alignm length: 345
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 119

Conread position: 23-371
Cow position:
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 151

Conread position: 24-370
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 117

Conread position: 33-235
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 11

Conread position: 36-371
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 138

Conread position: 45-371
Cow position:
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 25

Conread position: 45-371
Cow position:
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 111

Conread position: 45-386
Cow position:
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 102

Conread position: 72-355
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 24

Conread position: 104-391
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 44

Conread position: 119-351
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 180, 11

Conread position: 194-356
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 203-374
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 104, 36

Conread position: 203-374
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 158

Conread position: 205-378
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 155

Conread position: 209-370
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 122

Conread position: 210-371
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 131, 101

Conread position: 210-371
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 101

Conread position: 218-370
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 75

Conread position: 219-352
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 65

Conread position: 233-371
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 125

Conread position: 233-371
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 125

Conread position: 235-370
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 123

Conread position: 249-375
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 109

Show alignments to all cow chromosomes.