Cow genome map

Conread name: rpgl08_f5.y1

Conread position: 4-371
Cow position:
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 24

Conread position: 5-391
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 18

Conread position: 5-391
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 18

Conread position: 6-375
Cow position:
Alignm length: 375
Alignm identity: 252
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 17

Conread position: 6-386
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 11

Conread position: 7-201
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 159

Conread position: 7-277
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 127, 16

Conread position: 7-309
Cow position:
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 16

Conread position: 7-352
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 59, 24

Conread position: 7-371
Cow position:
Alignm length: 378
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 139

Conread position: 7-374
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 10

Conread position: 8-171
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 8-349
Cow position:
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 15

Conread position: 8-371
Cow position:
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 8-371
Cow position:
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 22

Conread position: 8-371
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 15

Conread position: 8-371
Cow position:
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 18

Conread position: 8-371
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 87, 19

Conread position: 8-371
Cow position:
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 15

Conread position: 8-372
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 15

Conread position: 8-387
Cow position:
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 8-391
Cow position:
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 12-129
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 12-276
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 145

Conread position: 12-378
Cow position:
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 14

Conread position: 13-366
Cow position:
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 9

Conread position: 13-372
Cow position:
Alignm length: 366
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 37

Conread position: 13-385
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 13-385
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 121, 13

Conread position: 13-391
Cow position:
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 14-365
Cow position:
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 16-170
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 118, 140

Conread position: 16-330
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 16-375
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 11

Conread position: 16-391
Cow position:
Alignm length: 381
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 140

Conread position: 17-227
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 17-352
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 34

Conread position: 17-364
Cow position:
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 17-370
Cow position:
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 18-339
Cow position:
Alignm length: 322
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 137, 0

Conread position: 18-378
Cow position:
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 94

Conread position: 19-372
Cow position:
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 313

Conread position: 23-328
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 116, 159

Conread position: 30-334
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 57

Conread position: 45-200
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 123

Conread position: 45-371
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 45-372
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 84

Conread position: 49-352
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 127

Conread position: 54-370
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 32

Conread position: 54-371
Cow position:
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 87

Conread position: 55-362
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 49

Conread position: 70-371
Cow position:
Alignm length: 323
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 125, 103

Conread position: 72-352
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 75

Conread position: 104-375
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 205, 33

Conread position: 116-371
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 59

Conread position: 133-371
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 150

Conread position: 135-379
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 20

Conread position: 136-371
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 6

Conread position: 204-371
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 130

Conread position: 210-371
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 96, 8

Conread position: 221-371
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 139

Conread position: 233-371
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 125

Conread position: 233-371
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 126

Conread position: 233-375
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 16

Conread position: 235-371
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 78

Conread position: 240-356
Cow position:
Alignm length: 118
Alignm identity: 104
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 110, 0

Show alignments to all cow chromosomes.