Cow genome map

Conread name: rpgl08_f5.y1

Conread position: 1-163
Cow position: chr6:14883125-14883285 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 26

Conread position: 3-142
Cow position: chr6:61845084-61844948 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 23

Conread position: 3-319
Cow position: chr6:1054719-1055032 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 132, 20

Conread position: 5-391
Cow position: chr6:45339512-45339888 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 10

Conread position: 6-132
Cow position: chr6:48151030-48151153 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 7-371
Cow position: chr6:37885008-37884628 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 16

Conread position: 7-378
Cow position: chr6:1632655-1632293 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 20

Conread position: 8-129
Cow position: chr6:15068543-15068662 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 8-371
Cow position: chr6:26242146-26242493 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 283, 18

Conread position: 8-378
Cow position: chr6:50482065-50481705 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 8-385
Cow position: chr6:7496668-7497040 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 18

Conread position: 11-309
Cow position: chr6:6228072-6227791 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 16

Conread position: 11-362
Cow position: chr6:37390010-37390355 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 11-371
Cow position: chr6:38940036-38939668 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 12

Conread position: 11-371
Cow position: chr6:50265670-50266017 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 12

Conread position: 11-378
Cow position: chr6:62423473-62423137 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 16

Conread position: 13-171
Cow position: chr6:44230841-44230999 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 39

Conread position: 13-349
Cow position: chr6:61435953-61436278 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 14

Conread position: 13-371
Cow position: chr6:49801708-49801338 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 10

Conread position: 15-356
Cow position: chr6:50743433-50743098 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 156

Conread position: 16-334
Cow position: chr6:27734053-27734364 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 35

Conread position: 16-391
Cow position: chr6:59297607-59297969 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 140

Conread position: 17-371
Cow position: chr6:62859871-62860239 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 156

Conread position: 18-356
Cow position: chr6:5717389-5717055 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 154

Conread position: 18-371
Cow position: chr6:11177491-11177153 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 35

Conread position: 18-391
Cow position: chr6:26454019-26454375 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 118, 73

Conread position: 19-228
Cow position: chr6:55961157-55960956 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 104

Conread position: 19-370
Cow position: chr6:42804433-42804092 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 50

Conread position: 19-371
Cow position: chr6:60794675-60795020 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 149

Conread position: 19-391
Cow position: chr6:27413091-27413451 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 81

Conread position: 19-391
Cow position: chr6:61542394-61542758 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 52

Conread position: 25-370
Cow position: chr6:47226376-47226016 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 118

Conread position: 30-281
Cow position: chr6:14638771-14638532 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 21

Conread position: 30-371
Cow position: chr6:47228560-47228895 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 28

Conread position: 33-378
Cow position: chr6:28433588-28433916 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 186, 79

Conread position: 35-267
Cow position: chr6:56911353-56911125 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 138

Conread position: 44-371
Cow position: chr6:62994327-62993990 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 22

Conread position: 46-321
Cow position: chr6:46552616-46552885 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 110

Conread position: 47-371
Cow position: chr6:16604815-16604475 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 298

Conread position: 50-371
Cow position: chr6:26451034-26451339 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 118

Conread position: 50-371
Cow position: chr6:44495934-44496250 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 98, 41

Conread position: 54-391
Cow position: chr6:60064783-60065114 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 81, 102

Conread position: 70-371
Cow position: chr6:24803512-24803829 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 104

Conread position: 118-386
Cow position: chr6:48151362-48151624 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 38

Conread position: 126-386
Cow position: chr6:53233540-53233799 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 24

Conread position: 152-378
Cow position: chr6:15068663-15068882 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 149, 21

Conread position: 200-385
Cow position: chr6:14883298-14883485 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 133

Conread position: 203-349
Cow position: chr6:44231080-44231228 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 16

Conread position: 203-367
Cow position: chr6:54337866-54338034 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 149

Conread position: 203-390
Cow position: chr6:61844922-61844735 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 7

Conread position: 208-369
Cow position: chr6:67782314-67782153 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 59

Conread position: 233-370
Cow position: chr6:23899851-23899990 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 30

Show alignments to all cow chromosomes.