Cow genome map
Conread name: | rpgl08_f5.y1 |
Conread position: | 1-163 |
Cow position: | chr6:14883125-14883285 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 138, 26 |
Conread position: | 3-142 |
Cow position: | chr6:61845084-61844948 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 131, 23 |
Conread position: | 3-319 |
Cow position: | chr6:1054719-1055032 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 231 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 132, 20 |
Conread position: | 5-391 |
Cow position: | chr6:45339512-45339888 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 10 |
Conread position: | 6-132 |
Cow position: | chr6:48151030-48151153 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 7-371 |
Cow position: | chr6:37885008-37884628 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 16 |
Conread position: | 7-378 |
Cow position: | chr6:1632655-1632293 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 20 |
Conread position: | 8-129 |
Cow position: | chr6:15068543-15068662 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 8-371 |
Cow position: | chr6:26242146-26242493 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 247 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 283, 18 |
Conread position: | 8-378 |
Cow position: | chr6:50482065-50481705 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 15 |
Conread position: | 8-385 |
Cow position: | chr6:7496668-7497040 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 18 |
Conread position: | 11-309 |
Cow position: | chr6:6228072-6227791 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 202 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 138, 16 |
Conread position: | 11-362 |
Cow position: | chr6:37390010-37390355 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 12 |
Conread position: | 11-371 |
Cow position: | chr6:38940036-38939668 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 12 |
Conread position: | 11-371 |
Cow position: | chr6:50265670-50266017 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 12 |
Conread position: | 11-378 |
Cow position: | chr6:62423473-62423137 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 248 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 137, 16 |
Conread position: | 13-171 |
Cow position: | chr6:44230841-44230999 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 13-349 |
Cow position: | chr6:61435953-61436278 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 14 |
Conread position: | 13-371 |
Cow position: | chr6:49801708-49801338 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 10 |
Conread position: | 15-356 |
Cow position: | chr6:50743433-50743098 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 156 |
Conread position: | 16-334 |
Cow position: | chr6:27734053-27734364 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 35 |
Conread position: | 16-391 |
Cow position: | chr6:59297607-59297969 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 140 |
Conread position: | 17-371 |
Cow position: | chr6:62859871-62860239 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 156 |
Conread position: | 18-356 |
Cow position: | chr6:5717389-5717055 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 154 |
Conread position: | 18-371 |
Cow position: | chr6:11177491-11177153 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 35 |
Conread position: | 18-391 |
Cow position: | chr6:26454019-26454375 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 269 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 118, 73 |
Conread position: | 19-228 |
Cow position: | chr6:55961157-55960956 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 44, 104 |
Conread position: | 19-370 |
Cow position: | chr6:42804433-42804092 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 50 |
Conread position: | 19-371 |
Cow position: | chr6:60794675-60795020 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 149 |
Conread position: | 19-391 |
Cow position: | chr6:27413091-27413451 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 81 |
Conread position: | 19-391 |
Cow position: | chr6:61542394-61542758 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 52 |
Conread position: | 25-370 |
Cow position: | chr6:47226376-47226016 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 118 |
Conread position: | 30-281 |
Cow position: | chr6:14638771-14638532 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 104, 21 |
Conread position: | 30-371 |
Cow position: | chr6:47228560-47228895 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 238 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 110, 28 |
Conread position: | 33-378 |
Cow position: | chr6:28433588-28433916 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 247 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 186, 79 |
Conread position: | 35-267 |
Cow position: | chr6:56911353-56911125 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 179 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 36, 138 |
Conread position: | 44-371 |
Cow position: | chr6:62994327-62993990 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 22 |
Conread position: | 46-321 |
Cow position: | chr6:46552616-46552885 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 204 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 91, 110 |
Conread position: | 47-371 |
Cow position: | chr6:16604815-16604475 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 298 |
Conread position: | 50-371 |
Cow position: | chr6:26451034-26451339 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 118 |
Conread position: | 50-371 |
Cow position: | chr6:44495934-44496250 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 233 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 98, 41 |
Conread position: | 54-391 |
Cow position: | chr6:60064783-60065114 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 242 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 81, 102 |
Conread position: | 70-371 |
Cow position: | chr6:24803512-24803829 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 104 |
Conread position: | 118-386 |
Cow position: | chr6:48151362-48151624 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 196 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 16, 38 |
Conread position: | 126-386 |
Cow position: | chr6:53233540-53233799 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 195 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 152-378 |
Cow position: | chr6:15068663-15068882 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 149, 21 |
Conread position: | 200-385 |
Cow position: | chr6:14883298-14883485 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 149 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 19, 133 |
Conread position: | 203-349 |
Cow position: | chr6:44231080-44231228 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 98, 16 |
Conread position: | 203-367 |
Cow position: | chr6:54337866-54338034 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 13, 149 |
Conread position: | 203-390 |
Cow position: | chr6:61844922-61844735 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 16, 7 |
Conread position: | 208-369 |
Cow position: | chr6:67782314-67782153 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 131 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 95, 59 |
Conread position: | 233-370 |
Cow position: | chr6:23899851-23899990 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 66, 30 |
Show alignments to all cow chromosomes.