Cow genome map


           Conread name:
           rpgl08_f5.y1
        

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               2-391
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 156
               

               Conread position:
               7-278
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               8-306
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 18
               

               Conread position:
               8-346
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               8-371
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 15
               

               Conread position:
               8-371
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 7
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 148
               

               Conread position:
               11-371
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               11-391
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               12-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 18
               

               Conread position:
               13-241
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               135, 14
               

               Conread position:
               16-378
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               16-391
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               16-391
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 81
               

               Conread position:
               17-378
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               18-338
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 26
               

               Conread position:
               18-375
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 129
               

               Conread position:
               19-151
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               19-370
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 77
               

               Conread position:
               19-378
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 137
               

               Conread position:
               19-379
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 129
               

               Conread position:
               19-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               20-371
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 50
               

               Conread position:
               20-371
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               25-371
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 45
               

               Conread position:
               30-371
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 60
               

               Conread position:
               34-361
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               35-351
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               37-292
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               198, 33
               

               Conread position:
               37-371
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 69
               

               Conread position:
               46-352
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               66-363
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 101
               

               Conread position:
               70-375
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               104-385
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               113-371
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               204-351
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               204-391
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               209-371
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 96
               

               Conread position:
               210-371
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               96, 8
               

               Conread position:
               223-371
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 138
               
Show alignments to all cow chromosomes.