• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rpgl10_d10.y1
        

               
Conread position:
               
1-169
               

               
Cow position:
               
chr18:3044337-3044509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr18:22214377-22214560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:51691568-51691329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:5711754-5711498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr18:40759103-40759259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
2-164
               

               
Cow position:
               
chr18:49659984-49659822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr18:16997149-16997321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr18:35012417-35012250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr18:36458830-36458997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr18:48828884-48828709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr18:56159358-56159527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr18:52854947-52855123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:4204024-4203858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:4871970-4872135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:19883426-19883605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:19896558-19896379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:25984673-25984505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:31125324-31125158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:47967027-47966855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:18369466-18369289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr18:21266400-21266578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr18:38344702-38344877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr18:4182292-4182112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr18:1732965-1732791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr18:56165880-56166060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr18:47517320-47517119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr18:43020499-43020317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr18:19273205-19273001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr18:39434723-39434917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr18:56044453-56044645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr18:21102875-21102677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr18:51656147-51655922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr18:11377261-11377488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr18:24266513-24266272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 222
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr18:12273554-12273809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 213
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr18:23162789-23163061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr18:36264869-36264614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
164, 72
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr18:49038356-49038620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 215
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr18:53642856-53642582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr18:29474637-29474906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:4264494-4264227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:51515371-51515096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 217
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:13359961-13360201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 46
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:19193469-19193202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
39, 209
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:30341277-30341012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:30586326-30586066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:31672613-31672348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:32883203-32883462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:49017399-49017653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:50382152-50382420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:54130437-54130172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr18:2592271-2591989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr18:2864098-2863834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 213
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr18:7415129-7414863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr18:23714990-23714718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 205
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr18:36768908-36768643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:5766309-5766582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:20127210-20126954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:21195448-21195175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 217
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:26355130-26354869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:31586471-31586222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
228, 80
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:38669906-38669651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr18:8171189-8170918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 213
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr18:18919060-18918790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr18:10214299-10214017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 220
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr18:12584947-12584668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr18:7109025-7109308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 218
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr18:48242086-48242358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr18:38985588-38985868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr18:19646075-19646334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr18:11322492-11322765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 205
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:10322703-10322977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:29958263-29958000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:43283861-43283575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:43555628-43555333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 226
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:43950720-43951021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 220
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:46647252-46646973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
163, 17
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr18:4556268-4555998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr18:43797056-43796786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 209
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr18:47511903-47512177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chr18:27109396-27109220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr18:51392742-51392550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr18:10977314-10977043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr18:50095499-50095233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr18:37023653-37023478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr18:9066592-9066870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 220
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr18:3180314-3180582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
163, 41
               

               
Conread position:
               
6-193
               

               
Cow position:
               
chr18:39022160-39022346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
8-166
               

               
Cow position:
               
chr18:38996360-38996201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
8-192
               

               
Cow position:
               
chr18:42747495-42747680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
8-195
               

               
Cow position:
               
chr18:55015275-55015460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr18:2774233-2774001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
157, 209
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr18:24508336-24508062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 224
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr18:4668595-4668334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr18:25281989-25281740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr18:20175289-20175027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr18:727935-728195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr18:42290422-42290158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr18:42293150-42292886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr18:14586562-14586299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
160, 34
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr18:29371771-29372050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 215
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr18:39662682-39662962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
9-169
               

               
Cow position:
               
chr18:5701153-5701314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr18:48961837-48962069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 214
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr18:39623704-39623971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 212
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr18:55747590-55747856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr18:22120977-22120704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr18:39001897-39001664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
10-255
               

               
Cow position:
               
chr18:51643463-51643205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
10-256
               

               
Cow position:
               
chr18:5632170-5632431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 207
               

               
Conread position:
               
10-259
               

               
Cow position:
               
chr18:51406001-51405747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr18:5078871-5078608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr18:47485957-47486223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr18:50974389-50974221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
11-225
               

               
Cow position:
               
chr18:2619307-2619092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 179
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr18:46048665-46048923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr18:1144280-1144014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr18:20462788-20462534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
14-173
               

               
Cow position:
               
chr18:51212751-51212908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
14-261
               

               
Cow position:
               
chr18:12058912-12059165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr18:32411100-32410843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr18:11867246-11867512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 204
               

               
Conread position:
               
15-324
               

               
Cow position:
               
chr18:21782602-21782915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
16-172
               

               
Cow position:
               
chr18:4624237-4624081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
23-163
               

               
Cow position:
               
chr18:2098826-2098684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
30-259
               

               
Cow position:
               
chr18:55119799-55120036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 185
               

               
Conread position:
               
30-260
               

               
Cow position:
               
chr18:40035922-40036132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr18:47125473-47125241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
153, 134
               

               
Conread position:
               
31-175
               

               
Cow position:
               
chr18:24342769-24342914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
31-262
               

               
Cow position:
               
chr18:5072483-5072245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
32-257
               

               
Cow position:
               
chr18:32189576-32189351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr18:32599982-32600221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 190
               

               
Conread position:
               
34-262
               

               
Cow position:
               
chr18:23630672-23630443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
35-228
               

               
Cow position:
               
chr18:51867617-51867419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
35-256
               

               
Cow position:
               
chr18:29091673-29091894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
37-173
               

               
Cow position:
               
chr18:46072397-46072535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
38-262
               

               
Cow position:
               
chr18:15172945-15173176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 177
               

               
Conread position:
               
39-265
               

               
Cow position:
               
chr18:17756994-17756766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
40-242
               

               
Cow position:
               
chr18:47565764-47565967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
40-255
               

               
Cow position:
               
chr18:5647750-5647973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
125, 170
               

               
Conread position:
               
42-173
               

               
Cow position:
               
chr18:2549364-2549231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
42-173
               

               
Cow position:
               
chr18:24529930-24529800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
42-173
               

               
Cow position:
               
chr18:56191022-56190890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
42-245
               

               
Cow position:
               
chr18:40047559-40047349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
42-255
               

               
Cow position:
               
chr18:3859786-3859998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
42-263
               

               
Cow position:
               
chr18:31557221-31556984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 176
               

               
Conread position:
               
42-263
               

               
Cow position:
               
chr18:52251918-52251680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
126, 176
               

               
Conread position:
               
43-192
               

               
Cow position:
               
chr18:38757897-38757742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
43-251
               

               
Cow position:
               
chr18:4758092-4757872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
44-172
               

               
Cow position:
               
chr18:22170559-22170689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
44-261
               

               
Cow position:
               
chr18:51192799-51192577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 166
               

               
Conread position:
               
45-173
               

               
Cow position:
               
chr18:56172068-56171942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
45-175
               

               
Cow position:
               
chr18:19787921-19788051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-192
               

               
Cow position:
               
chr18:6399690-6399542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
45-198
               

               
Cow position:
               
chr18:35889153-35889005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
45-246
               

               
Cow position:
               
chr18:19295830-19296031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
45-257
               

               
Cow position:
               
chr18:47693008-47693221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 126
               

               
Conread position:
               
45-258
               

               
Cow position:
               
chr18:24719255-24719477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
121, 165
               

               
Conread position:
               
45-259
               

               
Cow position:
               
chr18:912161-911954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
45-260
               

               
Cow position:
               
chr18:6818722-6818497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 174
               

               
Conread position:
               
45-262
               

               
Cow position:
               
chr18:7965174-7965405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 115
               

               
Conread position:
               
45-262
               

               
Cow position:
               
chr18:47525350-47525564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
186, 126
               

               
Conread position:
               
45-264
               

               
Cow position:
               
chr18:4649504-4649726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
45-264
               

               
Cow position:
               
chr18:20641554-20641327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 169
               

               
Conread position:
               
45-265
               

               
Cow position:
               
chr18:26843156-26842942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
181, 120
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr18:1954647-1954404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chr18:23653181-23652937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chr18:38806528-38806745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
190, 104
               

               
Conread position:
               
45-271
               

               
Cow position:
               
chr18:3211820-3212063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
118, 172
               

               
Conread position:
               
45-271
               

               
Cow position:
               
chr18:47416944-47417182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 168
               

               
Conread position:
               
45-271
               

               
Cow position:
               
chr18:52642182-52641951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 160
               

               
Conread position:
               
46-172
               

               
Cow position:
               
chr18:4757627-4757501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-262
               

               
Cow position:
               
chr18:35827430-35827206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
47-169
               

               
Cow position:
               
chr18:52635126-52635004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-244
               

               
Cow position:
               
chr18:11754077-11754281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
47-257
               

               
Cow position:
               
chr18:2146635-2146425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
181, 149
               

               
Conread position:
               
47-261
               

               
Cow position:
               
chr18:45558091-45558314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
47-271
               

               
Cow position:
               
chr18:135710-135482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
121, 90
               

               
Conread position:
               
47-271
               

               
Cow position:
               
chr18:53053290-53053052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 173
               

               
Conread position:
               
48-175
               

               
Cow position:
               
chr18:27388529-27388654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
48-194
               

               
Cow position:
               
chr18:15025618-15025768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
48-261
               

               
Cow position:
               
chr18:26458404-26458200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
181, 119
               

               
Conread position:
               
48-262
               

               
Cow position:
               
chr18:4066271-4066485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
49-256
               

               
Cow position:
               
chr18:15301088-15301282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
49-261
               

               
Cow position:
               
chr18:4851531-4851314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
50-163
               

               
Cow position:
               
chr18:21708180-21708067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
50-171
               

               
Cow position:
               
chr18:35692803-35692925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
51-175
               

               
Cow position:
               
chr18:11657603-11657727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
51-227
               

               
Cow position:
               
chr18:49655633-49655815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
51-255
               

               
Cow position:
               
chr18:42427568-42427781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
117, 161
               

               
Conread position:
               
52-172
               

               
Cow position:
               
chr18:52003481-52003601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
53-268
               

               
Cow position:
               
chr18:31082398-31082165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
55-261
               

               
Cow position:
               
chr18:9846458-9846247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 151
               

               
Conread position:
               
56-253
               

               
Cow position:
               
chr18:39168485-39168693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
57-262
               

               
Cow position:
               
chr18:9974374-9974158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 156
               

               
Conread position:
               
57-277
               

               
Cow position:
               
chr18:44917711-44917941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 161
               

               
Conread position:
               
58-256
               

               
Cow position:
               
chr18:14225349-14225554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 157
               

               
Conread position:
               
58-264
               

               
Cow position:
               
chr18:2794016-2793801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 155
               

               
Conread position:
               
62-174
               

               
Cow position:
               
chr18:4467027-4466913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
66-279
               

               
Cow position:
               
chr18:48407702-48407921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
91, 96
               

               
Conread position:
               
70-260
               

               
Cow position:
               
chr18:51413561-51413751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
70-261
               

               
Cow position:
               
chr18:47868577-47868767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
71-271
               

               
Cow position:
               
chr18:24946056-24946262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
73-260
               

               
Cow position:
               
chr18:28189753-28189564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
76-263
               

               
Cow position:
               
chr18:28297889-28297710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
76-264
               

               
Cow position:
               
chr18:51395912-51395721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr18:697242-697054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
78-271
               

               
Cow position:
               
chr18:35582063-35581873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
153, 93
               

               
Conread position:
               
81-262
               

               
Cow position:
               
chr18:45573358-45573553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
84-259
               

               
Cow position:
               
chr18:39860791-39860609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
85-272
               

               
Cow position:
               
chr18:33492342-33492530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
86-262
               

               
Cow position:
               
chr18:36501094-36500909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
88-262
               

               
Cow position:
               
chr18:45897717-45897899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
89-260
               

               
Cow position:
               
chr18:19917139-19917309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
101-270
               

               
Cow position:
               
chr18:20057174-20057350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
103-260
               

               
Cow position:
               
chr18:19831582-19831745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
108-227
               

               
Cow position:
               
chr18:3066349-3066469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
114-260
               

               
Cow position:
               
chr18:43400704-43400555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
116-271
               

               
Cow position:
               
chr18:18597070-18596912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
121-270
               

               
Cow position:
               
chr18:10117758-10117915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 93
               
Show alignments to all cow chromosomes.