Cow genome map
| Conread name: | rpgl10_d10.y1 |
| Conread position: | 2-150 |
| Cow position: | chr20:16715368-16715515 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 2-155 |
| Cow position: | chr20:24000825-24000668 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-169 |
| Cow position: | chr20:12996038-12995863 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 137 |
| Conread position: | 2-169 |
| Cow position: | chr20:19751280-19751450 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-169 |
| Cow position: | chr20:23506497-23506327 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-171 |
| Cow position: | chr20:14100461-14100291 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 2-171 |
| Cow position: | chr20:16548305-16548134 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 2-172 |
| Cow position: | chr20:35797581-35797754 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 41, 105 |
| Conread position: | 2-173 |
| Cow position: | chr20:6096521-6096347 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-173 |
| Cow position: | chr20:15565853-15565681 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 41, 125 |
| Conread position: | 2-173 |
| Cow position: | chr20:22484835-22485007 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 2-173 |
| Cow position: | chr20:34777152-34777328 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-173 |
| Cow position: | chr20:35907079-35906902 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 2-173 |
| Cow position: | chr20:36633791-36633960 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 2-173 |
| Cow position: | chr20:40157873-40158048 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-173 |
| Cow position: | chr20:40446305-40446477 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 2-174 |
| Cow position: | chr20:5636456-5636630 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 2-176 |
| Cow position: | chr20:40781940-40782109 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-177 |
| Cow position: | chr20:10772176-10772355 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 2-189 |
| Cow position: | chr20:33976454-33976646 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 2-190 |
| Cow position: | chr20:21714728-21714933 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-192 |
| Cow position: | chr20:20056512-20056319 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 61 |
| Conread position: | 2-199 |
| Cow position: | chr20:41883707-41883900 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 2-227 |
| Cow position: | chr20:9433558-9433792 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 43, 212 |
| Conread position: | 2-229 |
| Cow position: | chr20:6423944-6424166 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 2-241 |
| Cow position: | chr20:34001420-34001190 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 2-242 |
| Cow position: | chr20:7550211-7550462 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 151 |
| Conread position: | 2-250 |
| Cow position: | chr20:20898618-20898353 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 2-256 |
| Cow position: | chr20:7659246-7658983 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 37, 169 |
| Conread position: | 2-257 |
| Cow position: | chr20:4945274-4945006 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 2-257 |
| Cow position: | chr20:5644759-5645019 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 33, 116 |
| Conread position: | 2-257 |
| Cow position: | chr20:15568973-15568720 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 176, 23 |
| Conread position: | 2-257 |
| Cow position: | chr20:29845022-29845298 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 219 |
| Conread position: | 2-257 |
| Cow position: | chr20:33435194-33434916 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 223 |
| Conread position: | 2-257 |
| Cow position: | chr20:35192750-35193002 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 164, 43 |
| Conread position: | 2-259 |
| Cow position: | chr20:4334552-4334293 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 2-260 |
| Cow position: | chr20:3599422-3599156 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 2-260 |
| Cow position: | chr20:21345400-21345685 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 226 |
| Conread position: | 2-260 |
| Cow position: | chr20:29805689-29805431 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 144 |
| Conread position: | 2-260 |
| Cow position: | chr20:34108084-34108335 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 2-261 |
| Cow position: | chr20:6240549-6240273 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 133 |
| Conread position: | 2-261 |
| Cow position: | chr20:20983969-20984244 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 164, 40 |
| Conread position: | 2-261 |
| Cow position: | chr20:21761745-21762003 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 2-262 |
| Cow position: | chr20:6603012-6603277 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 2-262 |
| Cow position: | chr20:9376441-9376710 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 2-262 |
| Cow position: | chr20:11188826-11188575 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 164, 99 |
| Conread position: | 2-262 |
| Cow position: | chr20:14759688-14759426 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 33 |
| Conread position: | 2-262 |
| Cow position: | chr20:14980541-14980259 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 226 |
| Conread position: | 2-262 |
| Cow position: | chr20:28594255-28594540 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 39, 113 |
| Conread position: | 2-262 |
| Cow position: | chr20:38817978-38818237 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 2-262 |
| Cow position: | chr20:38868616-38868869 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 166, 33 |
| Conread position: | 2-263 |
| Cow position: | chr20:7442155-7441893 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 46 |
| Conread position: | 2-264 |
| Cow position: | chr20:746919-747181 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 163, 120 |
| Conread position: | 2-264 |
| Cow position: | chr20:11359657-11359388 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 2-264 |
| Cow position: | chr20:13023521-13023250 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 163, 98 |
| Conread position: | 2-264 |
| Cow position: | chr20:24711808-24712092 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 44, 223 |
| Conread position: | 2-264 |
| Cow position: | chr20:40256943-40257200 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 2-268 |
| Cow position: | chr20:14572387-14572123 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 2-268 |
| Cow position: | chr20:21428132-21428412 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 39, 218 |
| Conread position: | 2-269 |
| Cow position: | chr20:16492044-16492304 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 36, 170 |
| Conread position: | 2-271 |
| Cow position: | chr20:7738254-7737977 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 164, 43 |
| Conread position: | 2-271 |
| Cow position: | chr20:11741328-11741060 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 2-271 |
| Cow position: | chr20:15548928-15548636 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 226 |
| Conread position: | 2-272 |
| Cow position: | chr20:16941318-16941026 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 2-281 |
| Cow position: | chr20:11135790-11135484 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 226 |
| Conread position: | 3-261 |
| Cow position: | chr20:12581983-12581709 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 215 |
| Conread position: | 4-173 |
| Cow position: | chr20:11482160-11481987 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 153 |
| Conread position: | 4-173 |
| Cow position: | chr20:42458875-42458708 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 162, 31 |
| Conread position: | 4-199 |
| Cow position: | chr20:6890689-6890882 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 132 |
| Conread position: | 4-221 |
| Cow position: | chr20:21928880-21929100 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 180 |
| Conread position: | 4-256 |
| Cow position: | chr20:5009709-5009974 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 163, 127 |
| Conread position: | 4-260 |
| Cow position: | chr20:21372281-21372542 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 206 |
| Conread position: | 4-271 |
| Cow position: | chr20:5078598-5078892 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 230 |
| Conread position: | 4-271 |
| Cow position: | chr20:13652392-13652124 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 210 |
| Conread position: | 4-271 |
| Cow position: | chr20:20967293-20967574 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 46, 213 |
| Conread position: | 5-174 |
| Cow position: | chr20:580948-580771 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 5-227 |
| Cow position: | chr20:33067390-33067149 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 38, 219 |
| Conread position: | 6-174 |
| Cow position: | chr20:28955725-28955554 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 6-260 |
| Cow position: | chr20:311310-311549 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 222, 16 |
| Conread position: | 6-265 |
| Cow position: | chr20:9267131-9266848 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 6-270 |
| Cow position: | chr20:7624272-7624004 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 7-262 |
| Cow position: | chr20:13025638-13025375 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 207 |
| Conread position: | 7-264 |
| Cow position: | chr20:34397435-34397184 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 219, 119 |
| Conread position: | 8-165 |
| Cow position: | chr20:17765350-17765194 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 8-227 |
| Cow position: | chr20:354918-354688 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 8-243 |
| Cow position: | chr20:15822531-15822779 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 148, 118 |
| Conread position: | 8-247 |
| Cow position: | chr20:23850599-23850854 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 8-257 |
| Cow position: | chr20:5950663-5950397 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 8-257 |
| Cow position: | chr20:12126326-12126058 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 213 |
| Conread position: | 8-257 |
| Cow position: | chr20:34083698-34083964 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 160, 68 |
| Conread position: | 8-259 |
| Cow position: | chr20:8429728-8429987 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 8-262 |
| Cow position: | chr20:4755853-4755586 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 90, 207 |
| Conread position: | 8-265 |
| Cow position: | chr20:35146000-35146265 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 202 |
| Conread position: | 9-173 |
| Cow position: | chr20:24902319-24902145 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 9-264 |
| Cow position: | chr20:17251695-17251971 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 10-173 |
| Cow position: | chr20:9537117-9537280 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 10-173 |
| Cow position: | chr20:36040454-36040623 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 10-257 |
| Cow position: | chr20:25953247-25953510 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 120, 212 |
| Conread position: | 10-264 |
| Cow position: | chr20:10200323-10200602 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 214 |
| Conread position: | 11-256 |
| Cow position: | chr20:5702703-5702964 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 11-262 |
| Cow position: | chr20:19237059-19237319 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 12-257 |
| Cow position: | chr20:12534759-12534505 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 13-260 |
| Cow position: | chr20:40423119-40422852 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 209 |
| Conread position: | 13-262 |
| Cow position: | chr20:38551357-38551625 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 14-245 |
| Cow position: | chr20:16291678-16291922 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 15-173 |
| Cow position: | chr20:11038574-11038724 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 25-173 |
| Cow position: | chr20:361190-361042 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 27-192 |
| Cow position: | chr20:31799204-31799036 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 28-271 |
| Cow position: | chr20:26077667-26077437 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 207, 140 |
| Conread position: | 29-265 |
| Cow position: | chr20:35445101-35444856 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 137, 189 |
| Conread position: | 35-173 |
| Cow position: | chr20:15589048-15589191 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 39-261 |
| Cow position: | chr20:11101426-11101649 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 127, 66 |
| Conread position: | 40-271 |
| Cow position: | chr20:23590734-23590496 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 41-255 |
| Cow position: | chr20:31148177-31148392 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 126, 45 |
| Conread position: | 45-258 |
| Cow position: | chr20:28818909-28818692 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 45-271 |
| Cow position: | chr20:12239663-12239438 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 46-256 |
| Cow position: | chr20:14917304-14917512 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 182, 148 |
| Conread position: | 46-257 |
| Cow position: | chr20:33623533-33623316 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 97 |
| Conread position: | 46-258 |
| Cow position: | chr20:34202653-34202886 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 46-262 |
| Cow position: | chr20:5364949-5365177 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 122, 51 |
| Conread position: | 46-264 |
| Cow position: | chr20:35741787-35742023 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 171 |
| Conread position: | 46-280 |
| Cow position: | chr20:14620284-14620043 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 91, 166 |
| Conread position: | 47-251 |
| Cow position: | chr20:20934712-20934497 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 121, 166 |
| Conread position: | 47-254 |
| Cow position: | chr20:37919350-37919136 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 118, 164 |
| Conread position: | 47-255 |
| Cow position: | chr20:5703491-5703713 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 172 |
| Conread position: | 47-263 |
| Cow position: | chr20:4157443-4157646 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 48-173 |
| Cow position: | chr20:23678696-23678567 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 48-264 |
| Cow position: | chr20:6054488-6054255 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 120, 170 |
| Conread position: | 49-264 |
| Cow position: | chr20:3141596-3141827 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 115, 168 |
| Conread position: | 51-271 |
| Cow position: | chr20:28899118-28899339 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 58-262 |
| Cow position: | chr20:21941465-21941674 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 108, 155 |
| Conread position: | 61-169 |
| Cow position: | chr20:11866122-11866015 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 63-261 |
| Cow position: | chr20:21325362-21325572 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 110, 150 |
| Conread position: | 67-265 |
| Cow position: | chr20:27315022-27315226 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 69-265 |
| Cow position: | chr20:2316383-2316176 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 95, 143 |
| Conread position: | 73-271 |
| Cow position: | chr20:32636281-32636077 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 40 |
| Conread position: | 74-261 |
| Cow position: | chr20:11499059-11499250 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 97, 23 |
| Conread position: | 76-259 |
| Cow position: | chr20:22922967-22923159 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 78-265 |
| Cow position: | chr20:41977709-41977891 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 81-262 |
| Cow position: | chr20:14755786-14755595 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 82-271 |
| Cow position: | chr20:600361-600555 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 129 |
| Conread position: | 85-258 |
| Cow position: | chr20:38934997-38934822 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 81, 101 |
| Conread position: | 85-263 |
| Cow position: | chr20:19746029-19746221 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 132 |
| Conread position: | 88-255 |
| Cow position: | chr20:4789790-4789620 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 90-262 |
| Cow position: | chr20:38061703-38061525 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 93-242 |
| Cow position: | chr20:6848961-6849123 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 122 |
| Conread position: | 101-264 |
| Cow position: | chr20:22012470-22012638 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 109 |
| Conread position: | 102-263 |
| Cow position: | chr20:27407811-27407646 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 102-272 |
| Cow position: | chr20:21210108-21210286 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 106-262 |
| Cow position: | chr20:21279465-21279629 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 107 |
| Conread position: | 109-258 |
| Cow position: | chr20:8442373-8442211 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 121-260 |
| Cow position: | chr20:40578572-40578428 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 5 |
Show alignments to all cow chromosomes.