Cow genome map

Conread name: rpgl10_d10.y1

Conread position: 1-252
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 220

Conread position: 1-262
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-262
Cow position:
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 2-112
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 2-130
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 2-153
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 116

Conread position: 2-162
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 2-163
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 142

Conread position: 2-169
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 40, 102

Conread position: 2-169
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 2-169
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 40

Conread position: 2-169
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 164, 43

Conread position: 2-170
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 2-171
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 93

Conread position: 2-171
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 86

Conread position: 2-173
Cow position:
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 2-173
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 124

Conread position: 2-173
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 23

Conread position: 2-173
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 67

Conread position: 2-173
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 44, 106

Conread position: 2-174
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 2-175
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 174

Conread position: 2-179
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 40, 90

Conread position: 2-192
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 164, 0

Conread position: 2-199
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 179

Conread position: 2-203
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 2-221
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 175

Conread position: 2-243
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 31, 177

Conread position: 2-250
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 216

Conread position: 2-253
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 27

Conread position: 2-256
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 41, 91

Conread position: 2-257
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 77

Conread position: 2-258
Cow position:
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 105

Conread position: 2-259
Cow position:
Alignm length: 277
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 19

Conread position: 2-260
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 2-261
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 44, 28

Conread position: 2-261
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 133

Conread position: 2-261
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 209

Conread position: 2-262
Cow position:
Alignm length: 273
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 210

Conread position: 2-262
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-262
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 20

Conread position: 2-265
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 227

Conread position: 2-266
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 67

Conread position: 2-266
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 217

Conread position: 2-269
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 101

Conread position: 2-269
Cow position:
Alignm length: 279
Alignm identity: 208
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 81

Conread position: 2-271
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 225, 36

Conread position: 2-271
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 218

Conread position: 2-271
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 34

Conread position: 2-271
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 38, 214

Conread position: 2-284
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 222

Conread position: 3-173
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 99

Conread position: 3-262
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 174

Conread position: 3-264
Cow position:
Alignm length: 275
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 103

Conread position: 3-269
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 121

Conread position: 3-271
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 216

Conread position: 4-172
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 4-259
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 207

Conread position: 4-259
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 37, 94

Conread position: 4-260
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 212

Conread position: 4-261
Cow position:
Alignm length: 278
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 17

Conread position: 4-262
Cow position:
Alignm length: 278
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 98

Conread position: 4-262
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 162, 31

Conread position: 4-262
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 18

Conread position: 5-172
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 89

Conread position: 5-245
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 29

Conread position: 5-269
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 107

Conread position: 6-166
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 110

Conread position: 7-257
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 217

Conread position: 8-227
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 208

Conread position: 8-244
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 205

Conread position: 8-251
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 11

Conread position: 8-252
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 203

Conread position: 8-257
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 62

Conread position: 8-258
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 33, 213

Conread position: 8-279
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 160, 56

Conread position: 9-258
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 212

Conread position: 9-260
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 94

Conread position: 9-262
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 85

Conread position: 10-227
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 201

Conread position: 11-271
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 96

Conread position: 19-176
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 19-239
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 204

Conread position: 19-265
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 78

Conread position: 23-169
Cow position:
Alignm length: 147
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 28-271
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 6

Conread position: 29-247
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 184

Conread position: 31-261
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 128

Conread position: 31-277
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 135, 102

Conread position: 36-259
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 37-169
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 39-265
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 54

Conread position: 40-173
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 40-173
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 65

Conread position: 43-253
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 63

Conread position: 45-171
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 45-173
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 45-175
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 45-189
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 45-257
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 123, 167

Conread position: 45-260
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 174

Conread position: 45-262
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 172

Conread position: 45-272
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 183, 41

Conread position: 46-259
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 122, 169

Conread position: 46-260
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 85

Conread position: 46-270
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 59

Conread position: 46-271
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 182, 129

Conread position: 47-253
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 118, 50

Conread position: 47-272
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 119, 17

Conread position: 48-167
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 48-244
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 168

Conread position: 51-173
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 115, 34

Conread position: 51-244
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 59

Conread position: 52-271
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 113, 155

Conread position: 60-261
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 45

Conread position: 66-262
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 25

Conread position: 71-262
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 145

Conread position: 74-245
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 136

Conread position: 79-271
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 60

Conread position: 83-271
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 122, 17

Conread position: 86-263
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 80, 125

Conread position: 88-256
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 124

Conread position: 93-260
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 60

Conread position: 101-271
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 123, 70

Conread position: 103-254
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 105

Conread position: 106-258
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 108

Conread position: 107-244
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 99

Conread position: 108-262
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 102

Conread position: 112-262
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 102

Conread position: 115-262
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 14

Show alignments to all cow chromosomes.