Cow genome map

Conread name: rpgl10_d10.y1

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 127

Conread position: 1-203
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 1-261
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 101

Conread position: 2-141
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 2-155
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 2-171
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 2-173
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 2-173
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 138, 91

Conread position: 2-173
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 2-173
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 2-173
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 13

Conread position: 2-173
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 103

Conread position: 2-174
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 100

Conread position: 2-175
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 124

Conread position: 2-189
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 2-192
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 2-192
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 97

Conread position: 2-225
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 130

Conread position: 2-227
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 100

Conread position: 2-246
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 20

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 33

Conread position: 2-253
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 164, 42

Conread position: 2-253
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 154

Conread position: 2-256
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 215

Conread position: 2-257
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 88

Conread position: 2-257
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 164, 19

Conread position: 2-261
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 60

Conread position: 2-261
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 210

Conread position: 2-262
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 164, 32

Conread position: 2-262
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 58

Conread position: 2-262
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 222

Conread position: 2-262
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 183

Conread position: 2-262
Cow position:
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 218

Conread position: 2-262
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 48, 217

Conread position: 2-269
Cow position:
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 129

Conread position: 2-269
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 255

Conread position: 2-271
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 39, 222

Conread position: 2-271
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 16

Conread position: 2-271
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 31

Conread position: 3-173
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 87

Conread position: 3-270
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 216

Conread position: 4-173
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 163, 42

Conread position: 4-175
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 4-256
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 17

Conread position: 4-257
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 42, 204

Conread position: 4-259
Cow position:
Alignm length: 272
Alignm identity: 197
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 111

Conread position: 4-259
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 132, 36

Conread position: 4-259
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 17

Conread position: 4-262
Cow position:
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 149

Conread position: 4-262
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 100

Conread position: 5-198
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 19

Conread position: 5-296
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 80

Conread position: 6-171
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 104

Conread position: 6-258
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 16

Conread position: 6-262
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 97

Conread position: 7-262
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 35, 12

Conread position: 8-156
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 8-173
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 26

Conread position: 8-173
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 8-175
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 8-252
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 35

Conread position: 8-255
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 35, 212

Conread position: 8-257
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 45

Conread position: 8-257
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 214

Conread position: 8-287
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 209

Conread position: 9-259
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 112

Conread position: 9-271
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 35, 219

Conread position: 10-170
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 77

Conread position: 10-251
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 11

Conread position: 10-262
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 157, 65

Conread position: 10-271
Cow position:
Alignm length: 281
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 157, 39

Conread position: 10-271
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 71

Conread position: 17-260
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 71

Conread position: 19-173
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 19-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 14

Conread position: 28-173
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 30-192
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 85

Conread position: 30-244
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 148, 19

Conread position: 30-271
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 12

Conread position: 31-267
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 131, 14

Conread position: 32-271
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 32-271
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 187

Conread position: 38-255
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 130, 180

Conread position: 41-271
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 123

Conread position: 42-173
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 42-260
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 58

Conread position: 45-201
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 151

Conread position: 45-260
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 174

Conread position: 45-263
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 121, 175

Conread position: 45-263
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 189, 41

Conread position: 45-264
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 64

Conread position: 46-245
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 181, 158

Conread position: 46-257
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 168

Conread position: 46-260
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 40

Conread position: 48-261
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 170

Conread position: 49-253
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 73

Conread position: 51-258
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 86

Conread position: 56-225
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 84

Conread position: 59-262
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 160

Conread position: 59-271
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 42

Conread position: 61-258
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 157

Conread position: 61-263
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 165, 32

Conread position: 67-169
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 73-270
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 81

Conread position: 76-264
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 123

Conread position: 78-262
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 132

Conread position: 81-253
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 29

Conread position: 82-269
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 59

Conread position: 88-263
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 123

Conread position: 88-269
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 50

Conread position: 93-259
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 119

Conread position: 93-261
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 136, 5

Conread position: 93-270
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 64

Conread position: 109-265
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 44

Conread position: 117-262
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 10

Conread position: 121-258
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 83

Conread position: 140-271
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 65

Show alignments to all cow chromosomes.