Cow genome map

Conread name: rpgl10_d10.y1

Conread position: 1-255
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 167, 31

Conread position: 1-262
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 61

Conread position: 1-271
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 167, 230

Conread position: 2-133
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 20

Conread position: 2-150
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 92

Conread position: 2-155
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 2-162
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 103

Conread position: 2-169
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 72

Conread position: 2-169
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 110

Conread position: 2-171
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 2-173
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 2-173
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 2-173
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 101

Conread position: 2-173
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 104

Conread position: 2-174
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 114

Conread position: 2-174
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 2-176
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 17

Conread position: 2-179
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 78

Conread position: 2-189
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 2-192
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 2-192
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 164, 33

Conread position: 2-192
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 13

Conread position: 2-195
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 98

Conread position: 2-213
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 79

Conread position: 2-226
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 74, 229

Conread position: 2-227
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 206

Conread position: 2-227
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 86

Conread position: 2-240
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 86

Conread position: 2-244
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 223

Conread position: 2-251
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 210

Conread position: 2-253
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 107

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 207

Conread position: 2-256
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 217

Conread position: 2-257
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 150

Conread position: 2-257
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 44, 219

Conread position: 2-258
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 92

Conread position: 2-258
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 40, 227

Conread position: 2-258
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 161

Conread position: 2-259
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 214

Conread position: 2-259
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 33

Conread position: 2-260
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 212

Conread position: 2-261
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 184, 67

Conread position: 2-261
Cow position:
Alignm length: 276
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 22

Conread position: 2-261
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 137

Conread position: 2-262
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 159

Conread position: 2-262
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 223

Conread position: 2-262
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 119, 37

Conread position: 2-262
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 39

Conread position: 2-262
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 75

Conread position: 2-263
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 216

Conread position: 2-264
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 100

Conread position: 2-265
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 134, 33

Conread position: 2-266
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 44, 95

Conread position: 2-271
Cow position:
Alignm length: 286
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 215

Conread position: 2-271
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 169, 31

Conread position: 2-274
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 78

Conread position: 3-192
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 103

Conread position: 4-191
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 92

Conread position: 4-233
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 154

Conread position: 4-258
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 34

Conread position: 4-268
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 107

Conread position: 6-253
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 91

Conread position: 6-256
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 93

Conread position: 6-263
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 12

Conread position: 8-159
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 8-169
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 8-173
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 13

Conread position: 8-173
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 8-175
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 138

Conread position: 8-227
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 209

Conread position: 8-260
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 40, 104

Conread position: 8-261
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 8-262
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 68

Conread position: 8-264
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 155, 37

Conread position: 8-264
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 38

Conread position: 8-271
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 14

Conread position: 8-271
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 166, 17

Conread position: 9-135
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 9-244
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 98

Conread position: 9-261
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 211

Conread position: 9-264
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 123

Conread position: 10-174
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 10-175
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 10-175
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 79

Conread position: 10-182
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 141

Conread position: 10-191
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 10-261
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 216

Conread position: 10-262
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 163

Conread position: 10-262
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 31

Conread position: 11-218
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 208

Conread position: 11-252
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 148, 11

Conread position: 11-264
Cow position:
Alignm length: 275
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 7

Conread position: 15-192
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 86

Conread position: 16-263
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 30, 118

Conread position: 19-262
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 181

Conread position: 29-261
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 48

Conread position: 30-261
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 30-262
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 5

Conread position: 31-175
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 32-261
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 107

Conread position: 33-272
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 9

Conread position: 33-290
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 24

Conread position: 35-262
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 83

Conread position: 37-175
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 40-263
Cow position:
Alignm length: 225
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 189, 108

Conread position: 42-221
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 160, 0

Conread position: 42-266
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 175

Conread position: 43-262
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 45-169
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 45-170
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 45-192
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 45-251
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 183, 52

Conread position: 45-257
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 183, 73

Conread position: 45-259
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 143, 81

Conread position: 45-261
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 173

Conread position: 46-192
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 85

Conread position: 46-256
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 64

Conread position: 46-258
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 172

Conread position: 46-276
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 130, 164

Conread position: 47-253
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 176

Conread position: 47-258
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 50

Conread position: 47-276
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 114, 167

Conread position: 49-171
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 49-212
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 49-262
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 163

Conread position: 49-273
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 26, 217

Conread position: 55-192
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 55-265
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 50

Conread position: 57-224
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 149

Conread position: 59-271
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 46

Conread position: 69-265
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 162, 102

Conread position: 76-265
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 30

Conread position: 76-270
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 150, 24

Conread position: 78-256
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 52

Conread position: 83-258
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 22

Conread position: 88-271
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 143, 80

Conread position: 93-257
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 116

Conread position: 93-260
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 124

Conread position: 96-263
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 123

Conread position: 106-264
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 106

Show alignments to all cow chromosomes.